Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0830700-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:35538516:35544313:1 gene:Os01g0830700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 12 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-01);Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-02)
Sequence	ATGGCCAACCGGCGCAAGTTCTCGCAGGCGGGGGGCGGCGGCGGCGGCGGGGTGTTCGAC CCGTTCGGCACGAAACAGGCCGTGTCGTCGCTGCGGAAGGGCGGGCGGCTGCCGGTGTAC GTGGCTGGCGTCTTCTTCGTCATCTTCGTCATCATCATGTACGGCGAGGACATCCGGTCG CTCACGCTGGACCCGATCGCGCGCGCGGGGACAACGCCGGCGCGGATCGTGGAGCCGGTA GTGACGGAGGAGCGCCACGTCGCCCGGGTCAACCCTCCTCGGCGCGAGGTCTCGTCCGCG GAGAAGGCCGCCGCGTTGCCGCTCGACGTCGACGAGAGGCCGAAGCTGGCGACGCCGACG CCGACGGAGGCGGCGAAGGAGGTCCCGAAGGTCGAGAAGATCAGGAAGCCGAAGAAACCC AAGACGACGAAGAAGAAGCCGAGGAAGCCGCGGCCGGCGAAGAAGACGGTGGCGGCGGCA GCCGGGGGCCTGCTCGGCGTGCCGGAGACGTGCGACCTGTCCAAGGGCGAGTGGGTGTTC GACAACACCAGCTACCCTCTGTACCGGGAGGAGCAGTGCGAGTTCCTCACGTCGCAGGTG ACGTGCATGAGGAACGGCCGCCGCGACGACACCTACCAGAAGTGGCGGTGGCAGCCCAAA GACTGCTCCATGCCCAGGTTCGACGCGAAGCTGTTCATGGAGAGGCTCCGAGGGAAGCGG TTCATGTTCGTGGGGGACTCGCTGAACCGGAACCAGTGGGAGTCCATGGTGTGCCTGGTG CAGTCGGCGATGTCGCCGGGGAAGAAATACGTCACCTGGGAGGACCAGCGGGTCGTCTTC CACGCCGTGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGGAGTCC AACTCCGACGACCCCAAGATCCACAGCATCCAGCACCGGATCATCAAGGCGGACGCGATC GCGGCGCACGCACAGAACTGGCGCGGCGTCGACTACCTCGTCTTCAACACCTACATCTGG TGGATGAACACCCTCAACATGAAGATCATGAGACCGGGCGGGCAGAGCTGGGAGGAGCAT GACGAGGTCGTGAGGATCGAGGCGTATCGGAAGGTGCTGACGACGTGGGCGAGCTGGGTG AACGACAACATCGACCCGGCGCGCACGTCCGTCTTCTTCATGAGCATCTCCCCTCTTCAC ATCAGCCCGGAGGTGTGGGGGAACCCGGGCGGGATCCGGTGCGCCAAGGAGACGATGCCG CTGCTCAACTGGCACGGGCCGATCTGGCTGGGCACGGACTGGGACATGTTCCACGCGGCG GCCAACGTGTCCCGCACGGCGGCGACGCGGGTGCCCATCACCTTCGTCGACGTGACCACC ATGTCGGAGCGGCGCAAGGACGGGCACACCTCCGTGCACACCATCCGGCAGGGCAAGGTG CTGACGCCGGAGCAGCAGGCCGACCCTGGCACCTACGCCGACTGCATCCACTGGTGCCTC CCCGGCGTCCCTGACATCTGGAACCTCATCCTCTACACCAGGATAATGTCCAGGCCGCAG CTGGTATAG

Peptide Sequence

PEP ID	Os01t0830700-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:35538516:35544313:1 gene:Os01g0830700 transcript:Os01t0830700-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 12 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-01);Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-02)
Sequence	MANRRKFSQAGGGGGGGVFDPFGTKQAVSSLRKGGRLPVYVAGVFFVIFVIIMYGEDIRS LTLDPIARAGTTPARIVEPVVTEERHVARVNPPRREVSSAEKAAALPLDVDERPKLATPT PTEAAKEVPKVEKIRKPKKPKTTKKKPRKPRPAKKTVAAAAGGLLGVPETCDLSKGEWVF DNTSYPLYREEQCEFLTSQVTCMRNGRRDDTYQKWRWQPKDCSMPRFDAKLFMERLRGKR FMFVGDSLNRNQWESMVCLVQSAMSPGKKYVTWEDQRVVFHAVEYNATVEFYWAPFLVES NSDDPKIHSIQHRIIKADAIAAHAQNWRGVDYLVFNTYIWWMNTLNMKIMRPGGQSWEEH DEVVRIEAYRKVLTTWASWVNDNIDPARTSVFFMSISPLHISPEVWGNPGGIRCAKETMP LLNWHGPIWLGTDWDMFHAAANVSRTAATRVPITFVDVTTMSERRKDGHTSVHTIRQGKV LTPEQQADPGTYADCIHWCLPGVPDIWNLILYTRIMSRPQLV

Transcript Sequence

Transcript ID	Os01t0830700-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35538516:35544313:1 gene:Os01g0830700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 12 description:Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-01);Protein of unknown function DUF231, plant domain containing protein. (Os01t0830700-02)
Sequence	GTCTCTCACGCACGCGCACCGTGCAGAGCGAAGAGGAGAGGGGGCTAGCTCCGGGTGCCG TCGCCATGGCCAACCGGCGCAAGTTCTCGCAGGCGGGGGGCGGCGGCGGCGGCGGGGTGT TCGACCCGTTCGGCACGAAACAGGCCGTGTCGTCGCTGCGGAAGGGCGGGCGGCTGCCGG TGTACGTGGCTGGCGTCTTCTTCGTCATCTTCGTCATCATCATGTACGGCGAGGACATCC GGTCGCTCACGCTGGACCCGATCGCGCGCGCGGGGACAACGCCGGCGCGGATCGTGGAGC CGGTAGTGACGGAGGAGCGCCACGTCGCCCGGGTCAACCCTCCTCGGCGCGAGGTCTCGT CCGCGGAGAAGGCCGCCGCGTTGCCGCTCGACGTCGACGAGAGGCCGAAGCTGGCGACGC CGACGCCGACGGAGGCGGCGAAGGAGGTCCCGAAGGTCGAGAAGATCAGGAAGCCGAAGA AACCCAAGACGACGAAGAAGAAGCCGAGGAAGCCGCGGCCGGCGAAGAAGACGGTGGCGG CGGCAGCCGGGGGCCTGCTCGGCGTGCCGGAGACGTGCGACCTGTCCAAGGGCGAGTGGG TGTTCGACAACACCAGCTACCCTCTGTACCGGGAGGAGCAGTGCGAGTTCCTCACGTCGC AGGTGACGTGCATGAGGAACGGCCGCCGCGACGACACCTACCAGAAGTGGCGGTGGCAGC CCAAAGACTGCTCCATGCCCAGGTTCGACGCGAAGCTGTTCATGGAGAGGCTCCGAGGGA AGCGGTTCATGTTCGTGGGGGACTCGCTGAACCGGAACCAGTGGGAGTCCATGGTGTGCC TGGTGCAGTCGGCGATGTCGCCGGGGAAGAAATACGTCACCTGGGAGGACCAGCGGGTCG TCTTCCACGCCGTGGAGTACAACGCGACGGTGGAGTTCTACTGGGCGCCGTTCCTGGTGG AGTCCAACTCCGACGACCCCAAGATCCACAGCATCCAGCACCGGATCATCAAGGCGGACG CGATCGCGGCGCACGCACAGAACTGGCGCGGCGTCGACTACCTCGTCTTCAACACCTACA TCTGGTGGATGAACACCCTCAACATGAAGATCATGAGACCGGGCGGGCAGAGCTGGGAGG AGCATGACGAGGTCGTGAGGATCGAGGCGTATCGGAAGGTGCTGACGACGTGGGCGAGCT GGGTGAACGACAACATCGACCCGGCGCGCACGTCCGTCTTCTTCATGAGCATCTCCCCTC TTCACATCAGCCCGGAGGTGTGGGGGAACCCGGGCGGGATCCGGTGCGCCAAGGAGACGA TGCCGCTGCTCAACTGGCACGGGCCGATCTGGCTGGGCACGGACTGGGACATGTTCCACG CGGCGGCCAACGTGTCCCGCACGGCGGCGACGCGGGTGCCCATCACCTTCGTCGACGTGA CCACCATGTCGGAGCGGCGCAAGGACGGGCACACCTCCGTGCACACCATCCGGCAGGGCA AGGTGCTGACGCCGGAGCAGCAGGCCGACCCTGGCACCTACGCCGACTGCATCCACTGGT GCCTCCCCGGCGTCCCTGACATCTGGAACCTCATCCTCTACACCAGGATAATGTCCAGGC CGCAGCTGGTATAGCAAATTCCAAGAATTTACGGAGACCGGATTACTCATAGGCAGAGCT GGTTGGTTATACACAATCATCGTACTGAAAAGAGATTTTTCTTCTTCTTTTCTTCACATT CTTTTCTGGCCGTTTCACCTGCTGTCAGAAGATGTCTTTCATTTGTTCTTTTTCTTCAGG GGTTAGGTTAAGTGGGAAGAGATCGATACAGTATATGGTTATATATATGGCTAATGGGAT GGCCATGCTTGCGTACGTTACGTGCCTGCGTGCACAGATGCGCTGTAAGGTTCCTGACCA AACTGTACATTGGGGAAGAAAAGGATTAAAGCGAAAGAGATGAAC