Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0829000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:35477420:35479511:1 gene:Os01g0829000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MRL7 description:Thioredoxin-like fold domain containing protein. (Os01t0829000-01)
Sequence

ATGCTTCGTCTTCCCACTCTCCTCCCCCTAAAACCCTCGCCTCCCACCACCGGCTTAAAC
CCCATCCACGGCCGCCGCCATGGCCACCACCCCAGCCGCCTCCTCGCCTCCTCCGCCCCG
CCGCCGCCACCACCACGGCCTCCCAAGCCCGAGCCCCGTACCAGCCACGAGAACCTAGGC
GACGACACCCCCGATTTCCCCACAACCAAGCCCCGCAAGCCGCGCCGCGGGCGCCGGAGC
GAGGCGGCGGCGGTGGAGGACTTCGTGCGTGGCCGCCTCGAGCAGGTCTTCGCTTCCATC
CGGGAGCGCGACCCCGAAGTCCTCGAAGGCAAGGGCGACATCTTGAAGCGAAAGGAGGAG
CTCTCCGACGAGGAGGGAAAAGAGGGGACTGGTGAGGAAGAGGGGGAGCTGAAGGCTGTG
GTTGAGGAGGAGGATCCCTCCTGGCCTCTGGACGCCGACATCGGGTGGGGGATTCGGGCG
TCGGAGTACTTTGACAAGCATTCCATCAAGAATGTGACGGTGGATGGTGTGGAGATCGAT
TGGGAGAGGGAGGTCGAGGAGGGATGGGTCAAAGAGATCAACTGCTTGGAGTGGGAGAGC
TTCGCCTTCCACCCTAGCCCCCTCATCGTTCTTGTCTTCGAGCGCTACAACAGGGCAGCT
GACAATTGGAAGTTTCTTCAAGAATTGGAAAAGGCGGCTAAAGTTTACTGGAATAGTAAA
GATCGGCTACCTCCTCGGACAGTGAAGGTTGATATGAATATTGAGAGAGACCTGGCATTT
GCACTTCAAGTAAAAGAATGCCCACAATTATTATTCCTCAGGGGAAACAAGATATTATAC
AGGGAAAAAGAACTAAGAACTGCCGACGAACTAGTTCAAATGATTGCCCATTTCTACTAC
AATGCAAAGAGACCATCTTGTGTTAATCCTGAAGCTATTGCACCTCCGTGCTAA

Peptide Sequence

PEP ID

Os01t0829000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:35477420:35479511:1 gene:Os01g0829000 transcript:Os01t0829000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MRL7 description:Thioredoxin-like fold domain containing protein. (Os01t0829000-01)
Sequence

MLRLPTLLPLKPSPPTTGLNPIHGRRHGHHPSRLLASSAPPPPPPRPPKPEPRTSHENLG
DDTPDFPTTKPRKPRRGRRSEAAAVEDFVRGRLEQVFASIRERDPEVLEGKGDILKRKEE
LSDEEGKEGTGEEEGELKAVVEEEDPSWPLDADIGWGIRASEYFDKHSIKNVTVDGVEID
WEREVEEGWVKEINCLEWESFAFHPSPLIVLVFERYNRAADNWKFLQELEKAAKVYWNSK
DRLPPRTVKVDMNIERDLAFALQVKECPQLLFLRGNKILYREKELRTADELVQMIAHFYY
NAKRPSCVNPEAIAPPC

Transcript Sequence

Transcript ID

Os01t0829000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:35477420:35479511:1 gene:Os01g0829000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MRL7 description:Thioredoxin-like fold domain containing protein. (Os01t0829000-01)
Sequence

GTCGCCGTGATGCTTCGTCTTCCCACTCTCCTCCCCCTAAAACCCTCGCCTCCCACCACC
GGCTTAAACCCCATCCACGGCCGCCGCCATGGCCACCACCCCAGCCGCCTCCTCGCCTCC
TCCGCCCCGCCGCCGCCACCACCACGGCCTCCCAAGCCCGAGCCCCGTACCAGCCACGAG
AACCTAGGCGACGACACCCCCGATTTCCCCACAACCAAGCCCCGCAAGCCGCGCCGCGGG
CGCCGGAGCGAGGCGGCGGCGGTGGAGGACTTCGTGCGTGGCCGCCTCGAGCAGGTCTTC
GCTTCCATCCGGGAGCGCGACCCCGAAGTCCTCGAAGGCAAGGGCGACATCTTGAAGCGA
AAGGAGGAGCTCTCCGACGAGGAGGGAAAAGAGGGGACTGGTGAGGAAGAGGGGGAGCTG
AAGGCTGTGGTTGAGGAGGAGGATCCCTCCTGGCCTCTGGACGCCGACATCGGGTGGGGG
ATTCGGGCGTCGGAGTACTTTGACAAGCATTCCATCAAGAATGTGACGGTGGATGGTGTG
GAGATCGATTGGGAGAGGGAGGTCGAGGAGGGATGGGTCAAAGAGATCAACTGCTTGGAG
TGGGAGAGCTTCGCCTTCCACCCTAGCCCCCTCATCGTTCTTGTCTTCGAGCGCTACAAC
AGGGCAGCTGACAATTGGAAGTTTCTTCAAGAATTGGAAAAGGCGGCTAAAGTTTACTGG
AATAGTAAAGATCGGCTACCTCCTCGGACAGTGAAGGTTGATATGAATATTGAGAGAGAC
CTGGCATTTGCACTTCAAGTAAAAGAATGCCCACAATTATTATTCCTCAGGGGAAACAAG
ATATTATACAGGGAAAAAGAACTAAGAACTGCCGACGAACTAGTTCAAATGATTGCCCAT
TTCTACTACAATGCAAAGAGACCATCTTGTGTTAATCCTGAAGCTATTGCACCTCCGTGC
TAATCTCCTGCATTTCAGCGCTTATGTATTGAGACAGTGCCTTAATTCTCAACTCTTGGA
AAATAGTCTAAATAGACCAGTGTGGTTATGATGCTTGTATCTGTAATAAATGTATCACTT
GAAGAGGAAGGAGAGAAACCTCTTACTGGCTCATCTCAAGTTGGGAGGGGGTCAGGTATC
AACTATGTCATATATTTTGGTATGCTCATGTTTTTAGCTGTACACTTTCACCTTTGTACT
GTACTCTAACAAAACATACAGTTCATCAAATTTCTAGATAGAACAGGAGGGAATGCTAGC
TTAATTATCTGCGTGGCCATCCTGTTAAGGAGGTTGTAAAGTCGATTGTAAACTTTTGAG
GCGTAGTGTAATGTCATTTCACGCCATAGATGCAAAATGAAGGCAGGGGGGTCAACCCAT
TTGTC