Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0828300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35436761:35441722:1 gene:Os01g0828300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os01t0828300-01)
Sequence	ATGGCCATCTCCTCCGCCCTCTCCTTCCTCTCCGATCGCAAGCGCCCTATCGTTGTTTCC GTCTTCCTCTTCCTCCTCCTCTCATCCCTCTTCCTCCTCTTCAGCCCCGCACCTGCCGCG CTCCCTTTCTTCTCCTTCCCCTCCTCTCACCTCTCCTCCTCCTCCTCCTCTCCTATCGCC GCCACGCCGCCACCCCTGACTCCAGTTTCCGTCCCCGCCAACGCATCTTCACCGGAGACC CCAGTTGACGCGTCCGGTGGGAGCAACGCTGGCGCCACCGCACCCACCAGGGACGCTCCT CAGCCAGATCGCAGTCGGAGCACGCCCCCTGCCGCCGTCGGAGTGCGTGGATCGGCGGGC ACCAACGGAACCAGCAGGGGCGTCTCGGCCGGCGGCGATGGAGCAGGAGCAGCAGCGGCG GCGGCGGCAGGTGTGGCGGTGCCGTCGTGGGAGGTGTGCGAGGTGGGGAAGGGAGTGGTG GCCGCGGACTACATACCGTGCCTGGACAACGTGAAGGCGGTGAAGGCGTTGAAGTCGCTG CGTCACATGGAGCACCGGGAGCGCCACTGCCCGACGGCGCCGAGGCCGAGGTGCCTCGTG CCGCTGCCCACGGGGTACCGGTCACCCTTGCCGTGGCCGCGCAGCCGTGACATGATTTGG TACAATAATGTCCCTCATCCAAAGTTAGTGGAATACAAGAAGGACCAGAACTGGGTTAGG AAGTCTGGCAATTATTTTGTTTTCCCTGGAGGTGGAACTCAATTTAAAGCTGGTGTGACT AAATACATTCGATTTATTCAACAGATCATGCCAAACATTGAATGGGGGACCCATACAAGA ACTGTTCTGGATGTTGGATGCGGTGTTGCCAGCTTTGGTGGATACTTGCTTGACAGGAAT GTCATTACTATGTCTGTTGCACCCAAAGATGAGCATGAAGCTCAGATACAGTTTGCTCTC GAACGTGGAATTCCAGCATTGTTGGCAGTGATTGGAACACAAAAACTTCCATTCCCTGAT AATTCATTTGATGTGATCCATTGTGCAAGGTGTAGGGTCCACTGGTATGCTGATGGTGGA AAACCATTATTAGAGCTTAATAGAGTGCTCAGGCCTGGAGGATACTACATCTGGTCTGCA ACTCCTGTATATCGTCGTGGCAAAAGAGATGAAGACGACTGGAATGCGATGGTTACTCTG ACCAAGTCAATTTGCTGGAGGACAGTAGTAAAATCTAAGGATGTTAATAGGATTGGTGTT GTTATATATCAGAAGCCAACCTCAAATTCTTGCTACTTTGAGAGAAAACAGAATGAACCA CCCCTATGCCCTAGTAGGGAAGGATCACATTCCCCTTGGTATGCACCACTTGATAGTTGC CTCTTGTTACCTGCTGTGTCAAGTTCAGGTGAAGGAAACAGCTGGCCCATTTCCTGGCCA GAAAGGCTTAACATCAAATACTCAACTATATCTGACAACGCTTCTACTCAGTTTTCTCAA GAAAAATTTGATTCTGACACAAAGCACTGGAAGGACCTTGTTTCAGAAGTATATTTCAAT GAGTTTGCAGTTAATTGGTCTACCGTTCGCAATGTCATGGATATGAATGCTGGTTTTGGA GGATTTGCGGCGTCACTCATCCACAAACCTTTGTGGGTTATGAACGTTGTACCTTTTGAT CATCCAGAAGCCTTGCCTATCATTTTCAACAGAGGTTTGATTGGGGTATATCATGACTGG TGTGAATCTTTTAATACATATCCCCGGACCTATGATCTTGTTCACATGAGTTATCTCCTT CAGGGCCTCACAAATAGGTGTGATATCATTGAAGTAGCAGCAGAAATTGATAGGATACTT AGACCTGGAAAATGGTTCGTGTTGCAAGATACTGAGCAAGTGATTAGAAAAATGGATCCA GTTCTTCGCTCTTTGCACTACAGGACTGCAATTGTGAAGCAACAATTTCTTGTCGCTACA AAGGGCTTCTGGCGCCCATACAGTGCAGGTTCTGAGTCAAGATGA

Peptide Sequence

PEP ID	Os01t0828300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35436761:35441722:1 gene:Os01g0828300 transcript:Os01t0828300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os01t0828300-01)
Sequence	MAISSALSFLSDRKRPIVVSVFLFLLLSSLFLLFSPAPAALPFFSFPSSHLSSSSSSPIA ATPPPLTPVSVPANASSPETPVDASGGSNAGATAPTRDAPQPDRSRSTPPAAVGVRGSAG TNGTSRGVSAGGDGAGAAAAAAAGVAVPSWEVCEVGKGVVAADYIPCLDNVKAVKALKSL RHMEHRERHCPTAPRPRCLVPLPTGYRSPLPWPRSRDMIWYNNVPHPKLVEYKKDQNWVR KSGNYFVFPGGGTQFKAGVTKYIRFIQQIMPNIEWGTHTRTVLDVGCGVASFGGYLLDRN VITMSVAPKDEHEAQIQFALERGIPALLAVIGTQKLPFPDNSFDVIHCARCRVHWYADGG KPLLELNRVLRPGGYYIWSATPVYRRGKRDEDDWNAMVTLTKSICWRTVVKSKDVNRIGV VIYQKPTSNSCYFERKQNEPPLCPSREGSHSPWYAPLDSCLLLPAVSSSGEGNSWPISWP ERLNIKYSTISDNASTQFSQEKFDSDTKHWKDLVSEVYFNEFAVNWSTVRNVMDMNAGFG GFAASLIHKPLWVMNVVPFDHPEALPIIFNRGLIGVYHDWCESFNTYPRTYDLVHMSYLL QGLTNRCDIIEVAAEIDRILRPGKWFVLQDTEQVIRKMDPVLRSLHYRTAIVKQQFLVAT KGFWRPYSAGSESR

Transcript Sequence

Transcript ID	Os01t0828300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35436761:35441722:1 gene:Os01g0828300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF248, methyltransferase putative family protein. (Os01t0828300-01)
Sequence	TCTGCAACTCTCTGCACTGTCCCCGCTTCCTTCCACGGCCACGGCGGCGGCCATCGCCGC CGTCGGCGATCTCGCCCTGCTCCATCCCGCTCTCCCGTTTCCAATCCCCCAACCGGAGCA GAAATGGCCATCTCCTCCGCCCTCTCCTTCCTCTCCGATCGCAAGCGCCCTATCGTTGTT TCCGTCTTCCTCTTCCTCCTCCTCTCATCCCTCTTCCTCCTCTTCAGCCCCGCACCTGCC GCGCTCCCTTTCTTCTCCTTCCCCTCCTCTCACCTCTCCTCCTCCTCCTCCTCTCCTATC GCCGCCACGCCGCCACCCCTGACTCCAGTTTCCGTCCCCGCCAACGCATCTTCACCGGAG ACCCCAGTTGACGCGTCCGGTGGGAGCAACGCTGGCGCCACCGCACCCACCAGGGACGCT CCTCAGCCAGATCGCAGTCGGAGCACGCCCCCTGCCGCCGTCGGAGTGCGTGGATCGGCG GGCACCAACGGAACCAGCAGGGGCGTCTCGGCCGGCGGCGATGGAGCAGGAGCAGCAGCG GCGGCGGCGGCAGGTGTGGCGGTGCCGTCGTGGGAGGTGTGCGAGGTGGGGAAGGGAGTG GTGGCCGCGGACTACATACCGTGCCTGGACAACGTGAAGGCGGTGAAGGCGTTGAAGTCG CTGCGTCACATGGAGCACCGGGAGCGCCACTGCCCGACGGCGCCGAGGCCGAGGTGCCTC GTGCCGCTGCCCACGGGGTACCGGTCACCCTTGCCGTGGCCGCGCAGCCGTGACATGATT TGGTACAATAATGTCCCTCATCCAAAGTTAGTGGAATACAAGAAGGACCAGAACTGGGTT AGGAAGTCTGGCAATTATTTTGTTTTCCCTGGAGGTGGAACTCAATTTAAAGCTGGTGTG ACTAAATACATTCGATTTATTCAACAGATCATGCCAAACATTGAATGGGGGACCCATACA AGAACTGTTCTGGATGTTGGATGCGGTGTTGCCAGCTTTGGTGGATACTTGCTTGACAGG AATGTCATTACTATGTCTGTTGCACCCAAAGATGAGCATGAAGCTCAGATACAGTTTGCT CTCGAACGTGGAATTCCAGCATTGTTGGCAGTGATTGGAACACAAAAACTTCCATTCCCT GATAATTCATTTGATGTGATCCATTGTGCAAGGTGTAGGGTCCACTGGTATGCTGATGGT GGAAAACCATTATTAGAGCTTAATAGAGTGCTCAGGCCTGGAGGATACTACATCTGGTCT GCAACTCCTGTATATCGTCGTGGCAAAAGAGATGAAGACGACTGGAATGCGATGGTTACT CTGACCAAGTCAATTTGCTGGAGGACAGTAGTAAAATCTAAGGATGTTAATAGGATTGGT GTTGTTATATATCAGAAGCCAACCTCAAATTCTTGCTACTTTGAGAGAAAACAGAATGAA CCACCCCTATGCCCTAGTAGGGAAGGATCACATTCCCCTTGGTATGCACCACTTGATAGT TGCCTCTTGTTACCTGCTGTGTCAAGTTCAGGTGAAGGAAACAGCTGGCCCATTTCCTGG CCAGAAAGGCTTAACATCAAATACTCAACTATATCTGACAACGCTTCTACTCAGTTTTCT CAAGAAAAATTTGATTCTGACACAAAGCACTGGAAGGACCTTGTTTCAGAAGTATATTTC AATGAGTTTGCAGTTAATTGGTCTACCGTTCGCAATGTCATGGATATGAATGCTGGTTTT GGAGGATTTGCGGCGTCACTCATCCACAAACCTTTGTGGGTTATGAACGTTGTACCTTTT GATCATCCAGAAGCCTTGCCTATCATTTTCAACAGAGGTTTGATTGGGGTATATCATGAC TGGTGTGAATCTTTTAATACATATCCCCGGACCTATGATCTTGTTCACATGAGTTATCTC CTTCAGGGCCTCACAAATAGGTGTGATATCATTGAAGTAGCAGCAGAAATTGATAGGATA CTTAGACCTGGAAAATGGTTCGTGTTGCAAGATACTGAGCAAGTGATTAGAAAAATGGAT CCAGTTCTTCGCTCTTTGCACTACAGGACTGCAATTGTGAAGCAACAATTTCTTGTCGCT ACAAAGGGCTTCTGGCGCCCATACAGTGCAGGTTCTGAGTCAAGATGATTCATGCTTCGT CTTCTGTTGCTGTTAGTAAAAATCAAACAACTGATTTGATTCTTTAAATTCTAATTACAT GGATTCTTCGCATAGCATAGATGACACAAATTAGCCCCATATCAACGGTGAGTTCATTCC CTCTGTTTGTAGTTAGCAGTCCATATTAACCATCGGGCTTACTGAGTTGATTCTTTTGTT TCCGTTTTGTTGTGTACAAATTAAAGAACTTATGGCTACAGCAATAGCCAATAGGTTAGC AATAACAGATTGTGGATTTTGAAAGCATGTCTTGATTATTCATTGGT