Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0825000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35257561:35259062:1 gene:Os01g0825000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 12. (Os01t0825000-01)
Sequence	ATGTCCACAGAGAGGGAAAGACTCGATGAGATCGGCAAGAAGATCAAGCGAGAGCCGGAC ACCGCCGGCGTCGTAGTCGCCGCCGTCGCAGGCACCGGCACCGGTACAGCCACGCCGATC GAGCACCGCGTCCCCCATCGCCTCGGCCTCGGCGGCGCCGTGAACACCGTGACCCCGTGC GCCGCGTGCAAGCTCCTCCGCCGGCGCTGCGCGCAGGAGTGCCCCTTCGCCCCCTACTTC TCGCCGCACGAGCCCCACAAGTTCGCCGCCGTCCACAAGGTCTTCGGCGCCAGCAACGTC TCCAAGATGCTCCTGGAGGTCGGCGAGGCGGAGAGAGCCGACGCGGCGAGCAGCCTGGTG TACGAGGCGAATCTGCGGCTGCGCGACCCCGTGTACGGCTGCATGGGCGCCATCTCGATG CTGCAGCAGCAGGTGAACGCGCTGGAGGCCGAGCTGGAAGCGGTCAGGGCCGAGATCTTC AAGCGCAGGTACCGGCAGGCCGGCGCCGCCACCGGCCTCATGGACGACGTCCAAGTCCAT ATCACCGCCGGCTTCGCCGCTCCTCCTCCTCCTCCATCGATGCACGCGAGGGACGTGGTG TCAGTGGCGGACGCCGGCGGGCAAGGGCAAGAGTTGGCCGGAGCGCCGGTGATCTCGTCG GCGTCTCCGCCGGTGTATCCTGCCGGGCAGCCATCAACAAGTACTACTGACTACAGCTCC CTCAACACAAGTGAGCATGCTGCATACTTTGGTTGA

Peptide Sequence

PEP ID	Os01t0825000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35257561:35259062:1 gene:Os01g0825000 transcript:Os01t0825000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 12. (Os01t0825000-01)
Sequence	MSTERERLDEIGKKIKREPDTAGVVVAAVAGTGTGTATPIEHRVPHRLGLGGAVNTVTPC AACKLLRRRCAQECPFAPYFSPHEPHKFAAVHKVFGASNVSKMLLEVGEAERADAASSLV YEANLRLRDPVYGCMGAISMLQQQVNALEAELEAVRAEIFKRRYRQAGAATGLMDDVQVH ITAGFAAPPPPPSMHARDVVSVADAGGQGQELAGAPVISSASPPVYPAGQPSTSTTDYSS LNTSEHAAYFG

Transcript Sequence

Transcript ID	Os01t0825000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35257561:35259062:1 gene:Os01g0825000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to LOB domain protein 12. (Os01t0825000-01)
Sequence	TTGCCTTTTAAGCACTCTTTCCTTCCTTACAATTCCAAACTTTACACTTCTATACCCTCT TCTCTCCTCCGGCCCTATCTACAACTCTACATCTCCTCCTCCTTTCTTTTTGTTCTTGTT GTCCATCTCCATCTCGTCATACACCTCCCAAGCACGGGAGTATGCCTCAATGTCCACAGA GAGGGAAAGACTCGATGAGATCGGCAAGAAGATCAAGCGAGAGCCGGACACCGCCGGCGT CGTAGTCGCCGCCGTCGCAGGCACCGGCACCGGTACAGCCACGCCGATCGAGCACCGCGT CCCCCATCGCCTCGGCCTCGGCGGCGCCGTGAACACCGTGACCCCGTGCGCCGCGTGCAA GCTCCTCCGCCGGCGCTGCGCGCAGGAGTGCCCCTTCGCCCCCTACTTCTCGCCGCACGA GCCCCACAAGTTCGCCGCCGTCCACAAGGTCTTCGGCGCCAGCAACGTCTCCAAGATGCT CCTGGAGGTCGGCGAGGCGGAGAGAGCCGACGCGGCGAGCAGCCTGGTGTACGAGGCGAA TCTGCGGCTGCGCGACCCCGTGTACGGCTGCATGGGCGCCATCTCGATGCTGCAGCAGCA GGTGAACGCGCTGGAGGCCGAGCTGGAAGCGGTCAGGGCCGAGATCTTCAAGCGCAGGTA CCGGCAGGCCGGCGCCGCCACCGGCCTCATGGACGACGTCCAAGTCCATATCACCGCCGG CTTCGCCGCTCCTCCTCCTCCTCCATCGATGCACGCGAGGGACGTGGTGTCAGTGGCGGA CGCCGGCGGGCAAGGGCAAGAGTTGGCCGGAGCGCCGGTGATCTCGTCGGCGTCTCCGCC GGTGTATCCTGCCGGGCAGCCATCAACAAGTACTACTGACTACAGCTCCCTCAACACAAG TGAGCATGCTGCATACTTTGGTTGACTTGCATGGATTTATCTAACATTTTGGTGTGATCA CAATTAAGCCGGGGAAAATAAGATCTGTGTGCGAGATTAGTTATATATATGTTTCTCTAG AAATAGATATAGTTGTGGATACCTTGGGTGAAGAAAAGAATTTGTCCAATGGATGTATCA ATCCTTAATTTTATTGTATTGTCCATTGTGATTGGGCGGTTGATTT