Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0823500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35167601:35169129:-1 gene:Os01g0823500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6 description:Protein of unknown function DUF623, plant domain containing protein. (Os01t0823500-01)
Sequence	ATGGGGAGGCACAAGTTCAGGCTGTCCGACATGATCCCGAACGCGTGGTTCTTCAAGCTC CGCGACATGCGCGCCGCCCGGGGAGGTGCGGGCGCTGGCGGCGGCGGGGCCAGCCACGGT GGGGTGGTCACGCAGTCTTCGGTGGCCGTGTCGCGGGCGGGGAGGGCGTGCCGGCCGCTG CCGAACACGCCCAGGCACGGCGCGTTGTCGCTCCCGCACAGGGCGTCCTACTACTACACG CCGCGGGCCGGCGACCTGCTCGTGGGGTCGCCGCTCCATCCCAAGTGCTCCGACACGCAA TTCCCTCCTCTTCAGCTGTCGCCGCCGAGGAAGTCCAGGCGCAGGCACAGGCGGCGGTCC GTCAAGCTGGCGCCGTCCGTCAGCGGCAGCAGCGTCCTGTCCTCGCCGGTGTCCACCGGC TGCCGGTGCGGGCGCAAGCCGGAGCTCGTCGTGGTCGAGGCGCCCGACACCCCACCGTGC CGCCGCGACAAGTTCGTCGGCTACAATGACGACGACGATGACGAGGAAGAGGAAGAGGTG GAATTCAAGAAGCCGACGGTCGCCGTCGCCGCGTGTGACGAGCTCGACGGCAAGGTGATC ACCTCCGCCACGGACATCATCATCGACCTGCGGACCGAGAAGAGGCCCGACAAGGTGCTC CCGCCTATCGTGACCAAGCCGGCGAGGAGAGAGCTCGACGGCTGCGATCTGGAGGAGAAA CACATCGACGTCGTGAGACGCGCGTCGGCTAAAAAACCCACTACCCTCCTCGAACAGAGC AAGCCGAGGCGGTCGGTGTCATCCGCGCGCCGCCTCAAGACGCGCGCCAACACCCCGCGT ATCGTGGCCAAGAAGTCAAAGCCACCACCACCACCACCACCCGCGGCGGCGCGCTCGCCG GCGCCGACGACGAAGCCGCCCCTGGCGGAGAGCTTCGCGGTGGTGAAGTCGTCGCGGGAC CCGAGGAGGGACTTCCGGGAGTCCATGGAGGAGATGATCGCCGAGAACGGCATCCGCACC GCCGCCGACCTGGAGGACCTCCTGGCGTGCTACCTGTCGCTCAACGCCGCCGAGTACCAC GACCTCATCGTCGACGTGTTCGAGCATATCTGGGCCAACCTCGCGGACATCAAGATGTAG

Peptide Sequence

PEP ID	Os01t0823500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35167601:35169129:-1 gene:Os01g0823500 transcript:Os01t0823500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6 description:Protein of unknown function DUF623, plant domain containing protein. (Os01t0823500-01)
Sequence	MGRHKFRLSDMIPNAWFFKLRDMRAARGGAGAGGGGASHGGVVTQSSVAVSRAGRACRPL PNTPRHGALSLPHRASYYYTPRAGDLLVGSPLHPKCSDTQFPPLQLSPPRKSRRRHRRRS VKLAPSVSGSSVLSSPVSTGCRCGRKPELVVVEAPDTPPCRRDKFVGYNDDDDDEEEEEV EFKKPTVAVAACDELDGKVITSATDIIIDLRTEKRPDKVLPPIVTKPARRELDGCDLEEK HIDVVRRASAKKPTTLLEQSKPRRSVSSARRLKTRANTPRIVAKKSKPPPPPPPAAARSP APTTKPPLAESFAVVKSSRDPRRDFRESMEEMIAENGIRTAADLEDLLACYLSLNAAEYH DLIVDVFEHIWANLADIKM

Transcript Sequence

Transcript ID	Os01t0823500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35167601:35169129:-1 gene:Os01g0823500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OVATE family protein 4, ovate family protein 6, OVATE-domain containing protein 6 description:Protein of unknown function DUF623, plant domain containing protein. (Os01t0823500-01)
Sequence	TCAGAGCGCAGCGCGGCGCCATGGGGAGGCACAAGTTCAGGCTGTCCGACATGATCCCGA ACGCGTGGTTCTTCAAGCTCCGCGACATGCGCGCCGCCCGGGGAGGTGCGGGCGCTGGCG GCGGCGGGGCCAGCCACGGTGGGGTGGTCACGCAGTCTTCGGTGGCCGTGTCGCGGGCGG GGAGGGCGTGCCGGCCGCTGCCGAACACGCCCAGGCACGGCGCGTTGTCGCTCCCGCACA GGGCGTCCTACTACTACACGCCGCGGGCCGGCGACCTGCTCGTGGGGTCGCCGCTCCATC CCAAGTGCTCCGACACGCAATTCCCTCCTCTTCAGCTGTCGCCGCCGAGGAAGTCCAGGC GCAGGCACAGGCGGCGGTCCGTCAAGCTGGCGCCGTCCGTCAGCGGCAGCAGCGTCCTGT CCTCGCCGGTGTCCACCGGCTGCCGGTGCGGGCGCAAGCCGGAGCTCGTCGTGGTCGAGG CGCCCGACACCCCACCGTGCCGCCGCGACAAGTTCGTCGGCTACAATGACGACGACGATG ACGAGGAAGAGGAAGAGGTGGAATTCAAGAAGCCGACGGTCGCCGTCGCCGCGTGTGACG AGCTCGACGGCAAGGTGATCACCTCCGCCACGGACATCATCATCGACCTGCGGACCGAGA AGAGGCCCGACAAGGTGCTCCCGCCTATCGTGACCAAGCCGGCGAGGAGAGAGCTCGACG GCTGCGATCTGGAGGAGAAACACATCGACGTCGTGAGACGCGCGTCGGCTAAAAAACCCA CTACCCTCCTCGAACAGAGCAAGCCGAGGCGGTCGGTGTCATCCGCGCGCCGCCTCAAGA CGCGCGCCAACACCCCGCGTATCGTGGCCAAGAAGTCAAAGCCACCACCACCACCACCAC CCGCGGCGGCGCGCTCGCCGGCGCCGACGACGAAGCCGCCCCTGGCGGAGAGCTTCGCGG TGGTGAAGTCGTCGCGGGACCCGAGGAGGGACTTCCGGGAGTCCATGGAGGAGATGATCG CCGAGAACGGCATCCGCACCGCCGCCGACCTGGAGGACCTCCTGGCGTGCTACCTGTCGC TCAACGCCGCCGAGTACCACGACCTCATCGTCGACGTGTTCGAGCATATCTGGGCCAACC TCGCGGACATCAAGATGTAGCGGAAGAGCTCAGTCTCAAGCTCACTCGTGCTAGTGCAAT GCAATGCAACTCTTGTCTTGCATGGTGAATCCAATGAGTCCCATCGTGCCAAGAGCTGTC GTCTTGAGAATCTTGGTTTGCTCTAGCCTGTTAATGATCCTAAAATTGGGTATGATAAAT AGTGTTATCCAGACCTGGGATACTATGCTGTTCTTCTGTCTCTTTACATTTATGGTACTA TACTACAGTAGCTAGTATGAAATGTGAGAGGCTAATCCAGGCAAAACAGGGTACTACTAG TACTGTAGAAATCAACTATGGTAAAGACTAAATAGTGGTGTTGATAAATGATAATATTAA TGACAAATCTAATGGAGTCAAACAGTAGT