Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0822800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:35121625:35122986:-1 gene:Os01g0822800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3C. (Os01t0822800-01)
Sequence	ATGGGGGTGCACACGAAGTCGATGAGCTGGTACATGGGGACGCCGGCCTCGCCGTCGCCG GGGAGCGCCGGGGAGGCGCAGCACGCACTGAGCAGCGGCGGGGGAGGGGGCAGCGACGCC AGCTTCGACACCAACATGGTGATCATCCTCGCGGCGCTGCTCTTCGCGCTGCTGTTCGCG CTCGGGCTCAACTCGCTCGCGCGGCTCATCATCCGGTGGGCGCGGCGGGCGGCGACGGGG GAAGGCGCCGGCGGCGGCGTGGAGGGGGCGGGCGCCGGCGGCGGGCTCAAGAAGCGCGCG CTCAGGAGCATCCCCATCGAGGTGTACGGCGGAGGTGGTGGAGGGAGCCCCGCCGCCGCG GCGGAGGTCTGCGCCATCTGCCTCGGCGAGTTCGCGGACGGCGAGAAGGTGCGCGTGCTG CCGCGCTGCGGCCATGGCTTCCACGTCCGCTGCGTCGACACGTGGCTCGTCTCCCACGAC TCCTGCCCCACGTGCCGGGGCTCCGTCCTCCACGGCGCCACCACCAAGCACAAACCAACC GCCGCCGCCGCCGCCGCGGGCAGCCGGCGGCCGGGGAGCGAGGTCGACGCCCCCGCCGCC GCCGCCGTGACGGTGGTCATCGCGTGA

Peptide Sequence

PEP ID	Os01t0822800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:35121625:35122986:-1 gene:Os01g0822800 transcript:Os01t0822800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3C. (Os01t0822800-01)
Sequence	MGVHTKSMSWYMGTPASPSPGSAGEAQHALSSGGGGGSDASFDTNMVIILAALLFALLFA LGLNSLARLIIRWARRAATGEGAGGGVEGAGAGGGLKKRALRSIPIEVYGGGGGGSPAAA AEVCAICLGEFADGEKVRVLPRCGHGFHVRCVDTWLVSHDSCPTCRGSVLHGATTKHKPT AAAAAAGSRRPGSEVDAPAAAAVTVVIA

Transcript Sequence

Transcript ID	Os01t0822800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:35121625:35122986:-1 gene:Os01g0822800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RING-H2 finger protein ATL3C. (Os01t0822800-01)
Sequence	GTCTACTGCTACTACTACTACGGCTCAACTCCACTTGCTGTTGTTGATTCTCCTCCTCCT CCTCATCTCATCTCCCGAAATACTAATCCAGCTCGATCGTGTGGGAAAGAGATCACAGAA GGTACTTGGCTAGCTCACTCCATCAATCGATCGATCGGTACAGTTTAGCAACAGTTAAGC TTCACCTTTTTGTATTAGCTAGTGGCAGTCGCTACTACGTCCACGTCCTTTTGTGTTACG GATTGGTTCGCGAGCGAGATAACTGCGTGTTGTTCTAAGTTCTAGTAAGTTGGGGGGAGG CCATGGGGGTGCACACGAAGTCGATGAGCTGGTACATGGGGACGCCGGCCTCGCCGTCGC CGGGGAGCGCCGGGGAGGCGCAGCACGCACTGAGCAGCGGCGGGGGAGGGGGCAGCGACG CCAGCTTCGACACCAACATGGTGATCATCCTCGCGGCGCTGCTCTTCGCGCTGCTGTTCG CGCTCGGGCTCAACTCGCTCGCGCGGCTCATCATCCGGTGGGCGCGGCGGGCGGCGACGG GGGAAGGCGCCGGCGGCGGCGTGGAGGGGGCGGGCGCCGGCGGCGGGCTCAAGAAGCGCG CGCTCAGGAGCATCCCCATCGAGGTGTACGGCGGAGGTGGTGGAGGGAGCCCCGCCGCCG CGGCGGAGGTCTGCGCCATCTGCCTCGGCGAGTTCGCGGACGGCGAGAAGGTGCGCGTGC TGCCGCGCTGCGGCCATGGCTTCCACGTCCGCTGCGTCGACACGTGGCTCGTCTCCCACG ACTCCTGCCCCACGTGCCGGGGCTCCGTCCTCCACGGCGCCACCACCAAGCACAAACCAA CCGCCGCCGCCGCCGCCGCGGGCAGCCGGCGGCCGGGGAGCGAGGTCGACGCCCCCGCCG CCGCCGCCGTGACGGTGGTCATCGCGTGACCGGGGCAGGTGGGCCCCCGCTTCCCCCAGC CGCTGTGGGCCCAGTGTAACATACCCATGTAAAAAATCTCCTTTCTTGTTTTGGACCTAT GTAAAAAAATCTCTCCTTGGGCCAGGCCATGGCCCATGGCCGTGAGATATTTTCCGACGT TGGTGCTGTGAGAGGATGACGGGTGGGCCCGCTCGTCTGTTCAGTTTGTAGGTTACTCAC AGTAGTCCACCGTCCATTCGATTTCGATCTTGGCTAGCAAGGGCAGTTGTTGTGGAGGTT AGGAGGTACAGGACGCTTACAGTTACGTACAGGCTTGTAATATTACCGTATAAGTAGTAT CATTTTGCGAGGAAATACCGTATATTTGTTGGT