Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0819800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34946618:34949027:1 gene:Os01g0819800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0819800-01)
Sequence	ATGGCCACCGAGCCTTCCACCTCCGCACCAGCCTCCCCCGCCGCCGTCGCCGGCGGCGAC GACTCCCTCGAGCCATGGAGCGCGCGGGTGCGCACCCTGACGCGCCTCGGCCGGCACAGG GAGGCCCTTGCCCTCCTCCGCCACGGCGACCCCTCGCCGCCGCCGCACGCCCTGGCGCTC CCGGCGGCGGTGATCTCCTGCGCCAAGCTGCATCTCGCCTCGGGCGTCGCCCAGATACAC GCGCTCGCGGCCAAGCGCGGCCTCCTCCCGTCCTCCGACGCCTACCTCCTCTCCGCGCTG CTCTCCTCCTACTCCCGCCTCCGCCTCCTCCCGCTCGCCCGCCAGCTCCTCGACGAATTG CCCCTCGCGTCCACGCCGCCCGCCACGGCGCGCACCGCGTTCAACTCCCTCATCTCCGGG TGCGCGCTCCACGGGGTCCCGGCCGGCTGCTTCTCCCTCTTCCGCCGCATGCGCGTGGCC GCCGGCGTCCGCTTCGACGCCGTCACGCTGCTGGCGCTCGTCCCCGTTGCTCCCCTGGGC ATCGTGCCGCAGCTCCACGCCCTCGCGGCGCGATCGGGGCTCGCCGCGAACACTTCCGTG GCCAACTGCCTCGTGTCTGTCTACGCGCGCGGCGGCGGCGGCGGCGCCTCCCTTGCCCGC CAGGTTTTCGAGGAGATGCCGCGGGCCTCCCGCGACCTCGTGTCGTGGAACGCGGTGATC TCCGCCCACGCGCAGAACGGCCTCGCCGTGGAGGCCGTCGAGCTGTACCGGCGCATGCGT GGCCCGGAAGGCGGCGGGGTGGAACCGGACGCCGTGACGCTCGTCGGCGTCCTCTCCTCC TGCGCGCACACCGGCGCGCGCCGCGTGGGCCTTGACGTCGAGCGGTACGTGCGGGATACA ATCCCGGGCTTCCGCGACAACCTGCCGCTCTGCAACGCGCTCATCAACTTCCACGCGCGC TGCGGCAGCTTGGCCCAGGCGCAGGAGCTGTTCGACGAAATGCCCGAGAGGAGCGTCGTC TCGTGGACGACGCTGATCATCGGGTACGGCATGCACGGACAGGGCGACATCGCCGTCGAC CTCTTCGAGACGATGGTGTCGGAAGCAACCGCGCCGGACAGCGTGGCCATGGTCGGCCTT CTGTCGGCGTGCAGCCACGCCGGCATGTACGACGAAGGGCGCAAGTACTTCTCAACAATG GAGCGCGATTACTGCCTCCGGCCCAAACTGGAGCACTACACCTGCATGGTGGACCTCCTC GGACGAGCCGGCCGTCTCGACGAAGCACGGGAGCTCATCGCGTCGATGCCGATGGCGGCC GACGGCGCGGTCTGGGGCGCGCTGCTCGGAGCCTGCAAGATACACAAGAACGTGGAGATG GGAGAAGAGGCCTTCGAGCGCGTCGTCAGCCTCGAGCCGGCCAACGTGGGGTACTACGTG CTCATGGCGAACATCTACGCCGACGCCGGGCAGCTCGACGGCGTGGCGAAGGTGCGGGCG GCGATGAGGCGGCGCGGGCTCAGGAAGGAGCCCGGGTGTAGCTACGTCGAGCACAAGGGG AAGGTCCACCTGTTCATGGCCGACGACCACTCGCACCCGCAGGCGAGGAGGATCTACGAG CTCGTGGTCGAGCTGGAGCGGATGGTGAAGGAGAAGACGGGTGGCGATGTGGTTGAGGAG CGCGCTGAGAAGGCGGTAGCGGAGGCGGCGGCCGTGCCATTGGTGGGGTTCCACAGCGAG AAGCTGGCGGTGGCGTTCGGGTTGCTGAACACGGAGGCGGGAAGTGAGATCGTGGTGATC AAGAACCTGCGGGTGTGCGGGGACTGCCACTCGTTTCTGAAGACGATCTCGGAGTTGACA AATAGAGCGTTTCTCGTCAGGGACGCGAGCCGGTTCCATCGCTTCGAGAATGGGGCCTGC TCCTGCAGAGACTACTGGTGA

Peptide Sequence

PEP ID	Os01t0819800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34946618:34949027:1 gene:Os01g0819800 transcript:Os01t0819800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0819800-01)
Sequence	MATEPSTSAPASPAAVAGGDDSLEPWSARVRTLTRLGRHREALALLRHGDPSPPPHALAL PAAVISCAKLHLASGVAQIHALAAKRGLLPSSDAYLLSALLSSYSRLRLLPLARQLLDEL PLASTPPATARTAFNSLISGCALHGVPAGCFSLFRRMRVAAGVRFDAVTLLALVPVAPLG IVPQLHALAARSGLAANTSVANCLVSVYARGGGGGASLARQVFEEMPRASRDLVSWNAVI SAHAQNGLAVEAVELYRRMRGPEGGGVEPDAVTLVGVLSSCAHTGARRVGLDVERYVRDT IPGFRDNLPLCNALINFHARCGSLAQAQELFDEMPERSVVSWTTLIIGYGMHGQGDIAVD LFETMVSEATAPDSVAMVGLLSACSHAGMYDEGRKYFSTMERDYCLRPKLEHYTCMVDLL GRAGRLDEARELIASMPMAADGAVWGALLGACKIHKNVEMGEEAFERVVSLEPANVGYYV LMANIYADAGQLDGVAKVRAAMRRRGLRKEPGCSYVEHKGKVHLFMADDHSHPQARRIYE LVVELERMVKEKTGGDVVEERAEKAVAEAAAVPLVGFHSEKLAVAFGLLNTEAGSEIVVI KNLRVCGDCHSFLKTISELTNRAFLVRDASRFHRFENGACSCRDYW

Transcript Sequence

Transcript ID	Os01t0819800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34946618:34949027:1 gene:Os01g0819800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0819800-01)
Sequence	GGCGGCAATGGCCACCGAGCCTTCCACCTCCGCACCAGCCTCCCCCGCCGCCGTCGCCGG CGGCGACGACTCCCTCGAGCCATGGAGCGCGCGGGTGCGCACCCTGACGCGCCTCGGCCG GCACAGGGAGGCCCTTGCCCTCCTCCGCCACGGCGACCCCTCGCCGCCGCCGCACGCCCT GGCGCTCCCGGCGGCGGTGATCTCCTGCGCCAAGCTGCATCTCGCCTCGGGCGTCGCCCA GATACACGCGCTCGCGGCCAAGCGCGGCCTCCTCCCGTCCTCCGACGCCTACCTCCTCTC CGCGCTGCTCTCCTCCTACTCCCGCCTCCGCCTCCTCCCGCTCGCCCGCCAGCTCCTCGA CGAATTGCCCCTCGCGTCCACGCCGCCCGCCACGGCGCGCACCGCGTTCAACTCCCTCAT CTCCGGGTGCGCGCTCCACGGGGTCCCGGCCGGCTGCTTCTCCCTCTTCCGCCGCATGCG CGTGGCCGCCGGCGTCCGCTTCGACGCCGTCACGCTGCTGGCGCTCGTCCCCGTTGCTCC CCTGGGCATCGTGCCGCAGCTCCACGCCCTCGCGGCGCGATCGGGGCTCGCCGCGAACAC TTCCGTGGCCAACTGCCTCGTGTCTGTCTACGCGCGCGGCGGCGGCGGCGGCGCCTCCCT TGCCCGCCAGGTTTTCGAGGAGATGCCGCGGGCCTCCCGCGACCTCGTGTCGTGGAACGC GGTGATCTCCGCCCACGCGCAGAACGGCCTCGCCGTGGAGGCCGTCGAGCTGTACCGGCG CATGCGTGGCCCGGAAGGCGGCGGGGTGGAACCGGACGCCGTGACGCTCGTCGGCGTCCT CTCCTCCTGCGCGCACACCGGCGCGCGCCGCGTGGGCCTTGACGTCGAGCGGTACGTGCG GGATACAATCCCGGGCTTCCGCGACAACCTGCCGCTCTGCAACGCGCTCATCAACTTCCA CGCGCGCTGCGGCAGCTTGGCCCAGGCGCAGGAGCTGTTCGACGAAATGCCCGAGAGGAG CGTCGTCTCGTGGACGACGCTGATCATCGGGTACGGCATGCACGGACAGGGCGACATCGC CGTCGACCTCTTCGAGACGATGGTGTCGGAAGCAACCGCGCCGGACAGCGTGGCCATGGT CGGCCTTCTGTCGGCGTGCAGCCACGCCGGCATGTACGACGAAGGGCGCAAGTACTTCTC AACAATGGAGCGCGATTACTGCCTCCGGCCCAAACTGGAGCACTACACCTGCATGGTGGA CCTCCTCGGACGAGCCGGCCGTCTCGACGAAGCACGGGAGCTCATCGCGTCGATGCCGAT GGCGGCCGACGGCGCGGTCTGGGGCGCGCTGCTCGGAGCCTGCAAGATACACAAGAACGT GGAGATGGGAGAAGAGGCCTTCGAGCGCGTCGTCAGCCTCGAGCCGGCCAACGTGGGGTA CTACGTGCTCATGGCGAACATCTACGCCGACGCCGGGCAGCTCGACGGCGTGGCGAAGGT GCGGGCGGCGATGAGGCGGCGCGGGCTCAGGAAGGAGCCCGGGTGTAGCTACGTCGAGCA CAAGGGGAAGGTCCACCTGTTCATGGCCGACGACCACTCGCACCCGCAGGCGAGGAGGAT CTACGAGCTCGTGGTCGAGCTGGAGCGGATGGTGAAGGAGAAGACGGGTGGCGATGTGGT TGAGGAGCGCGCTGAGAAGGCGGTAGCGGAGGCGGCGGCCGTGCCATTGGTGGGGTTCCA CAGCGAGAAGCTGGCGGTGGCGTTCGGGTTGCTGAACACGGAGGCGGGAAGTGAGATCGT GGTGATCAAGAACCTGCGGGTGTGCGGGGACTGCCACTCGTTTCTGAAGACGATCTCGGA GTTGACAAATAGAGCGTTTCTCGTCAGGGACGCGAGCCGGTTCCATCGCTTCGAGAATGG GGCCTGCTCCTGCAGAGACTACTGGTGAAGAATTTGGTGTGCCTGGTGAAGGAAACACAA ATGGGAACTCAAACTTTGGTGTGCCTGGTGAAGGAAAGACAAATGGGAATACAAGCTGGT TGAGATCTGCCGCGGAACGTGATGTTGGCTACCGGCAAACCGTTGAACAGCAAGACAGAG AAGCCGTCGAACCAGTGCCGTCCGATCTCGAGAGTGAGCAGGAAGACGTTCGGCGAACTG TCACTCAGAACCGGAGTTTAGGCTGGAAGCGCAAGCCGATGGAACAATTCCGATCGGTAG AGGAGACAAAAAAAAAAATCAAAACAAAGGCCTGAAATTTTGCATTTTTTACACGCCCCC TGATCTAACAATGATCTCGTGCAGTCGTGTGCCGTTAGCTAAGTGTTGTCAGGTTCTTTG TGCAGGATGGACATGGGCACATGGCTGCCGATAGCATAAACATTTGATAAAGAATGACTT TAAGCTCGAT