Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0819000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:34888360:34892652:1 gene:Os01g0819000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-02)
Sequence	ATGGAGGACTTGCTGGACACGGAGATCGGGAAGCATGACTACGACTGGCTTCTGACTCCC CCAGGATCACCTCATGCTCCTATACTGGAGGTTGTGGAGAAAGCTCCATCCTCAGATGTC CCTAAACGCATTACTACTAGATCATCCTCAACCACTAGAGCATCAAGGCTTTCCATTCCT GAAACAGAGAATGGGCATTCCACAGTACCAACTAGGCCAGCACGGAGTAACTCTGTCTCT CGCCCTTCAATCCAATCTACTCTTATTTCCAGCAACAACAGGTCATCAGTTGTCAATGCA AGCATTTCCTCTGTCTGTTCGCCACCTACAACTCCAAGCAAGAGGACTAGCACTCTTTCT TCATCAAAGCCATCAGTTCCAGCTTCACGTCAAGTACCAACACGGCCCTCTACTCCAACT AAAACCCGTCCATGTACTCCAGTGAAACCTCGGCCATCTACTCCAGTCAAACCTCGGCCA TCTACTCCAAATAAAACTCGGCCTTCTACTCCAGTCAAAACTAGATCTTCTGTACCCAAC ACTATGTCCACCTCAACTATTGCCAAAACAACATCTGCACAAAACTCGAGACCATCAACT CCAACCTCTCGGCCTCGTATCATGTCCAATTCATCTTCAAGTACAAGTTCTGCAGCAAGT CGTCCTAGTTCATCCTCTGGAAGAACTAGTACAATTAGTCGCACCTCCTCTTCCACAAGT ACAGTTCCTTCAGTCAGCCGCTCTAGCTCTCGTTCATCTACACCTACGCGTCAGCCTATC ACACGTTCATCAGCCCCACTGGCTGGCCACTCACCTTCTGTTGGGAGGATATTTGGCAGC AATAACATAACATCCATCGGGCGGCCTGTAACCAGTAATGGTCGAAGTTCAGCACCTTCT TCTGCACCATCATCTCGTCCAAGTTCCCCAAATTCACGTGCACGAGCTCCAGTCAGGCCG TTAGATATTCCTGATTTTCCAAGTGAAACTCCACCAAACCTAAGGACTAAGCTACCACAA CGACCACTATCTGCTGGTAGAGCACGCCCAGGAGTGGGTTTGGGACCCAAGTCAGCCCCA AATGCTGAACAAGTTCGCTCAGCTCCTGTAAAAAAGATGACTGTGCCTGCTATTACGCGA AGTAAATTTCCTGATGCACCATCTAGGGTATCTTCTCTTACAAATGGACACCAAAGCAGA CAGTCCGAGGGGTCTGCTGTGGAAGGCCAACATACTAAACCATTACGGTCTATCACGGGC ACAGATAATGGCTTTGGTAGGACAATATCAAGGAAGTCACTTGACATGGCAATCAAGCAT ATGGACATTCGACAAAACCTGGGTGGTATTCGTGGTGCATCTCTATTCCCGCCTAGCATT CGCTCTGCCGGTGCGAAGGTCCGGTCAGCTCGAATGTCTGATCCCGCTCATCTCAGTTTA AATGGCGATTGTCATTTTACTGACAATGGCAGCATCAATGGACACTTCTCTGGAGATTCG AACGGAACTCTTTCAAACAACGGTGGCAGCTCAACTGGTTCTCCAGACAGGGAAAGCATT GGAACTAAGGAGACACTGAGTGAACTAGATCTGTATACCACTGCACGGTATGAGGCATTG TTGTTGAGGGAGGACATAACGAACACGAACTGGTTGCACAACGTTGATGACAAATCTGAC CAGAGCCCAGTGTTTGATCACCGGTTTGAGCCGCTCCCAGAGCCATTTGGTCCACTATGA

Peptide Sequence

PEP ID	Os01t0819000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:34888360:34892652:1 gene:Os01g0819000 transcript:Os01t0819000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-02)
Sequence	MEDLLDTEIGKHDYDWLLTPPGSPHAPILEVVEKAPSSDVPKRITTRSSSTTRASRLSIP ETENGHSTVPTRPARSNSVSRPSIQSTLISSNNRSSVVNASISSVCSPPTTPSKRTSTLS SSKPSVPASRQVPTRPSTPTKTRPCTPVKPRPSTPVKPRPSTPNKTRPSTPVKTRSSVPN TMSTSTIAKTTSAQNSRPSTPTSRPRIMSNSSSSTSSAASRPSSSSGRTSTISRTSSSTS TVPSVSRSSSRSSTPTRQPITRSSAPLAGHSPSVGRIFGSNNITSIGRPVTSNGRSSAPS SAPSSRPSSPNSRARAPVRPLDIPDFPSETPPNLRTKLPQRPLSAGRARPGVGLGPKSAP NAEQVRSAPVKKMTVPAITRSKFPDAPSRVSSLTNGHQSRQSEGSAVEGQHTKPLRSITG TDNGFGRTISRKSLDMAIKHMDIRQNLGGIRGASLFPPSIRSAGAKVRSARMSDPAHLSL NGDCHFTDNGSINGHFSGDSNGTLSNNGGSSTGSPDRESIGTKETLSELDLYTTARYEAL LLREDITNTNWLHNVDDKSDQSPVFDHRFEPLPEPFGPL

Transcript Sequence

Transcript ID	Os01t0819000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34888360:34892652:1 gene:Os01g0819000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-01);Similar to transposon protein CACTA, En/Spm sub-class. (Os01t0819000-02)
Sequence	GTGTCTGCCTCTCTCTCTCGCGCGCGCAGCCTACCGCCACAAGCAAAGTCCAGGAGGGCT CGGGCACGGAAGCTTCTGGAAGCTTCCGCGTTGGCGTGAGGAAGGAGGCGGAGGGGAGGG GAGGGGGACTGACCTACTCCCTCACCGCGGTCGTTCCAAGTCCCGCGCCGCCGGGGATTC CCATCCCCTCTCGCGGCGCGCCGCTTCGACGGGAGGCATCGTCGTATCGCATCGATCTGG TTTGGGGGGTTTTGGGAGTCTGAAGTGGTGGGTTTGAGATGGAGGACTTGCTGGACACGG AGATCGGGAAGCATGACTACGACTGGCTTCTGACTCCCCCAGGATCACCTCATGCTCCTA TACTGGAGGTTGTGGAGAAAGCTCCATCCTCAGATGTCCCTAAACGCATTACTACTAGAT CATCCTCAACCACTAGAGCATCAAGGCTTTCCATTCCTGAAACAGAGAATGGGCATTCCA CAGTACCAACTAGGCCAGCACGGAGTAACTCTGTCTCTCGCCCTTCAATCCAATCTACTC TTATTTCCAGCAACAACAGGTCATCAGTTGTCAATGCAAGCATTTCCTCTGTCTGTTCGC CACCTACAACTCCAAGCAAGAGGACTAGCACTCTTTCTTCATCAAAGCCATCAGTTCCAG CTTCACGTCAAGTACCAACACGGCCCTCTACTCCAACTAAAACCCGTCCATGTACTCCAG TGAAACCTCGGCCATCTACTCCAGTCAAACCTCGGCCATCTACTCCAAATAAAACTCGGC CTTCTACTCCAGTCAAAACTAGATCTTCTGTACCCAACACTATGTCCACCTCAACTATTG CCAAAACAACATCTGCACAAAACTCGAGACCATCAACTCCAACCTCTCGGCCTCGTATCA TGTCCAATTCATCTTCAAGTACAAGTTCTGCAGCAAGTCGTCCTAGTTCATCCTCTGGAA GAACTAGTACAATTAGTCGCACCTCCTCTTCCACAAGTACAGTTCCTTCAGTCAGCCGCT CTAGCTCTCGTTCATCTACACCTACGCGTCAGCCTATCACACGTTCATCAGCCCCACTGG CTGGCCACTCACCTTCTGTTGGGAGGATATTTGGCAGCAATAACATAACATCCATCGGGC GGCCTGTAACCAGTAATGGTCGAAGTTCAGCACCTTCTTCTGCACCATCATCTCGTCCAA GTTCCCCAAATTCACGTGCACGAGCTCCAGTCAGGCCGTTAGATATTCCTGATTTTCCAA GTGAAACTCCACCAAACCTAAGGACTAAGCTACCACAACGACCACTATCTGCTGGTAGAG CACGCCCAGGAGTGGGTTTGGGACCCAAGTCAGCCCCAAATGCTGAACAAGTTCGCTCAG CTCCTGTAAAAAAGATGACTGTGCCTGCTATTACGCGAAGTAAATTTCCTGATGCACCAT CTAGGGTATCTTCTCTTACAAATGGACACCAAAGCAGACAGTCCGAGGGGTCTGCTGTGG AAGGCCAACATACTAAACCATTACGGTCTATCACGGGCACAGATAATGGCTTTGGTAGGA CAATATCAAGGAAGTCACTTGACATGGCAATCAAGCATATGGACATTCGACAAAACCTGG GTGGTATTCGTGGTGCATCTCTATTCCCGCCTAGCATTCGCTCTGCCGGTGCGAAGGTCC GGTCAGCTCGAATGTCTGATCCCGCTCATCTCAGTTTAAATGGCGATTGTCATTTTACTG ACAATGGCAGCATCAATGGACACTTCTCTGGAGATTCGAACGGAACTCTTTCAAACAACG GTGGCAGCTCAACTGGTTCTCCAGACAGGGAAAGCATTGGAACTAAGGAGACACTGAGTG AACTAGATCTGTATACCACTGCACGGTATGAGGCATTGTTGTTGAGGGAGGACATAACGA ACACGAACTGGTTGCACAACGTTGATGACAAATCTGACCAGAGCCCAGTGTTTGATCACC GGTTTGAGCCGCTCCCAGAGCCATTTGGTCCACTATGATGGTTATTAGCTGTAAAATCTC GTTCCTCGTTATGTTTACAATTAGTAGTTGCAAGTTGTATGCGGTTATATCTTTCTGTGT GGTTGTCCATTTCCCCCATCTTTTCATGAATCTTCTGAAAGATAAGATTGTGGGGTTTAT GTTTTGAAGTAGTACTCCATAAATACCTGGAGATTCGATTTTGAGTTATCGCTGTACTGA AATCCAAGTGTCAGAGCACGATATAGTTTCTCTTTTTATCCC