Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0818300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34852308:34855786:1 gene:Os01g0818300 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0818300-01)
Sequence	ATGGAGGCGTTGACGAACGCGGAGAAATGCTTCTCCCCTGCCAGGGCGATGTCCCCGCTG CCGCTGGTGAGGCCGCCGCCATCACCGGGCGCTGCCGGTCAGTACCTGGCAGAGTTGCTG CAGGAACAGCAGAAGATTGGTCCCTTTGTGCAGGTGCTCCCAATCTGCGGCAGGCTGTTG AATCAAGAGATAATGAGAATGTCTGCTATTGTTTCGCACCTTGGAGTAAGGGAACATGAT AGGCTGCCCATTGCAAGTCCAAACCAGATGCATCCGTTGCCGCAGGTGCCTAATTTTTGC GGGAATGGATTCAATCCATGGACTGGGACGCTCCCAGAGAAAAATGGCTTTCCTCGGGGA ACTATGGGTTGGGAAGGTGCAGCACATGACCCATCTTACATTGTGAAGAAGATCGTGCGG CTGGAAGTTCCAACAGATGCTTATCCTCATTTCAATTTTATTGGCCGTCTGCTTGGGCCA AGGGGAAACTCACTGAAGAGAGTTGAAGCCTCAACAGGTTGCCGGGTTTTCATCAGAGGG AAGGGCTCCATAAAAGATCCCATCAAGGAGGAACAATTGAAGGGAAGGCCTGGCTATGAA CATTTGAGTGATCCGACACATATCTTGATTGAAGCTGAATTACCTGCTGATGTCATTGAC ACAAGACTAGCACAAGCTCAAGAAATACTAGAGGACTTGTTGAAACCAGTGGAGGAGTCA CAAGACTTTCTCAAGAGGCAACAGCTTAGAGAGCTTGCTGTGCTGAACTCCACATATCGA GAGGATAGCCCCCATCAAAATGGCAGTGCCTCTCCCTTCAGCAATGGTAGCACAAAACTC GGGAAGCAATGA

Peptide Sequence

PEP ID	Os01t0818300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34852308:34855786:1 gene:Os01g0818300 transcript:Os01t0818300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0818300-01)
Sequence	MEALTNAEKCFSPARAMSPLPLVRPPPSPGAAGQYLAELLQEQQKIGPFVQVLPICGRLL NQEIMRMSAIVSHLGVREHDRLPIASPNQMHPLPQVPNFCGNGFNPWTGTLPEKNGFPRG TMGWEGAAHDPSYIVKKIVRLEVPTDAYPHFNFIGRLLGPRGNSLKRVEASTGCRVFIRG KGSIKDPIKEEQLKGRPGYEHLSDPTHILIEAELPADVIDTRLAQAQEILEDLLKPVEES QDFLKRQQLRELAVLNSTYREDSPHQNGSASPFSNGSTKLGKQ

Transcript Sequence

Transcript ID	Os01t0818300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34852308:34855786:1 gene:Os01g0818300 gene_biotype:protein_coding transcript_biotype:protein_coding description:K Homology domain containing protein. (Os01t0818300-01)
Sequence	CTACCGGGGGTAAAAAGATTTGAGAGCCAGCGGAAGAACCTCCAAAAGGATCCATTTTTG ACACCTCGCGTGCAGGATTTCGCCGCAATCTCCCAGCGCTGATTGTTACCGCGCCGCACA AAATAGGAGATAAAAACGCAATAAAAACGGAAGAAAAAAAGAATAAAAAGGCAAAATCAC ATCTTTTCGGTTCCCCCATCTTGTTTTCCTCTCCATTGCTAGCAGCTAATCCTTCCCCCA ATCCAATCCGCCGCCGCCGCCATCGCCATGGAGGCGTTGACGAACGCGGAGAAATGCTTC TCCCCTGCCAGGGCGATGTCCCCGCTGCCGCTGGTGAGGCCGCCGCCATCACCGGGCGCT GCCGGTCAGTACCTGGCAGAGTTGCTGCAGGAACAGCAGAAGATTGGTCCCTTTGTGCAG GTGCTCCCAATCTGCGGCAGGCTGTTGAATCAAGAGATAATGAGAATGTCTGCTATTGTT TCGCACCTTGGAGTAAGGGAACATGATAGGCTGCCCATTGCAAGTCCAAACCAGATGCAT CCGTTGCCGCAGGTGCCTAATTTTTGCGGGAATGGATTCAATCCATGGACTGGGACGCTC CCAGAGAAAAATGGCTTTCCTCGGGGAACTATGGGTTGGGAAGGTGCAGCACATGACCCA TCTTACATTGTGAAGAAGATCGTGCGGCTGGAAGTTCCAACAGATGCTTATCCTCATTTC AATTTTATTGGCCGTCTGCTTGGGCCAAGGGGAAACTCACTGAAGAGAGTTGAAGCCTCA ACAGGTTGCCGGGTTTTCATCAGAGGGAAGGGCTCCATAAAAGATCCCATCAAGGAGGAA CAATTGAAGGGAAGGCCTGGCTATGAACATTTGAGTGATCCGACACATATCTTGATTGAA GCTGAATTACCTGCTGATGTCATTGACACAAGACTAGCACAAGCTCAAGAAATACTAGAG GACTTGTTGAAACCAGTGGAGGAGTCACAAGACTTTCTCAAGAGGCAACAGCTTAGAGAG CTTGCTGTGCTGAACTCCACATATCGAGAGGATAGCCCCCATCAAAATGGCAGTGCCTCT CCCTTCAGCAATGGTAGCACAAAACTCGGGAAGCAATGACTTTGTGATTCCAACCCCCTT GATCCCTCCAAAGGCGCTCTAATCAACTTGCTTTCATGACATAGAATCCTGCTTTACATT GCATAGATTTGATGATGATGATGAAGCTTCTGTGAGACTATGATGTTGGAATTTTGCTAT TGCTAGCTGCTGAATTTTGATACTCCCCCTTGATGACATTAGCTCGTGGCTGAGGTGACT AGTTGAATCTCCATGGCTGTAAAATGAGAATGTTCATTTGTTTCTTTACCATCGACTGTT AGTTCTGATGACTATGGTGACAGTGCACTGAGTTGCCAAAGTTTTACCTAAGGTAGTAGA AGAATACCAGAATTTTCAACC