Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0818200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34841616:34845610:-1 gene:Os01g0818200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0818200-01);Hypothetical gene. (Os01t0818200-02)
Sequence	ATGGCGGCGCTGCGCGTCCCGCTCCGCGCGATCCTCGCCACCCCGCGCGCGGCGGGGCCG CGCCTCCTCCTCCCGCTCCACGCCCACCTCCTCGTCTCCGGCCGCCTCGCCGCCTCCCCG GCCGCGCTCACCTCCCTCGTCTCGCTCTACGCGCGCGCCGCCGCCCCGGCGCTCCACCGC CACGTCGCCCCGCTCCTCCTGGACCGACCGTCGCCCCCGCCGCTTCCCTGCTTCAACGCG GGGCTCTCCCTGCCCCACCCGCTCGCGCTCGCGGTGTTCCGCGGCCTCCGCCACGCGTAC TCCCCGGACGCCTTCTCCTTCCCGCCCCTCGTCTCCTCCGCGCCCTCGCCGCCACACCTC CTCGCGCTCCACGCCCTCGCGCTCCGCTGCGGCCTCGCGCACGACCTCTTCTGCGCCAGC GCGATGCTCCGCTCGTGCCTCAGGTTTGGACTCGCGGACCACGCTCGCCGCCTGTTCGGC GAATTGCCGCGCCGGGACGTGGTGGTGTGGAACGCGATGGTCAATGGGTTTGCCAGGCTC GGGTGCTTCGGCCACGCCGTGGAGTGCTTCCGGATGATGAGGGAGGACGGTGAGGTCGAG ATCAGCAGCTTCACCGTCACCGGCATCCTGTCGGTCTGTACCGCCACAGCGGATTTGGGG CACGGGGCTGCGGTTCATGGGCTAGTGGTGAAGTCCGCGTTTGAACAGGAGGTGTCTGTG TGCAATGCGTTGGTGGATCTTTACGGGAAGTGCCACAAGGTGGATGATGCAGCAATGGTG TTTGAGGGGATGGCGGACATAGTCAAGGATCTGTTCAGCTGGAACTCAATGCTGTCAGCG CTGCATTACTCCGCTGACCATGCTGGGACAATGAAGCTGTTTTCAAGGATGAGACGCGTT GCTGTGTGGCCAGATGCAGTGACCGTTGCGGCTGTTCTTCCTGCATGCGCGCAGACTGCA GCATTGCAGGTGGGAAGGGAAGTGCATGGGTACATTGTAACTAGTGGACTGGCTTGCCAT GGCGCGTTGGACTCGTTTGCTTGTAATGCACTGGTGGACATGTATGCCAAGAGTGGGGCT TTGGATGAGGCTCGTCGCATATTTGATCGGATGCAACAGCGGGATGTGGCATCATGGAAT ATTATGATTGATGGATATGCATCGCACGGGCATGGGAAGGAAGCACTGGAGTTGTTCTGC CAGATGACAGAGGTGGAACGGCTTCTTCCAGATGAGATAACACTGTTGGGGGCATTGTCG GCTTGCAGCCATTCCGGGCTTGTTGAAGAAGGGAAGAATTTTCTGAAGAGAATGAAAGAG GAATTTTCTTTGGAGCCACAGTTAGAGCACTACGCATGTGTGACTGACATGCTTGGGCGT GCAGGGAGGCTGGAGGAGGCTAGAAAGGTAGTAGAGGATGCAGGGGATGTGGGGGTTGGT GCTTGGAGGACATACCTTGCAGCATGCCGGATGCATGGTGATAAGGAGAGAGCCCAAGAG GCAGCTAGGATGCTGATGACGACAGAGCAGTCTGAGAGTGGTGGGTGGGTGCTGCTAGCG AATACATATGGCTGGGAGGGAAACTTTGACGAACTGGAAGAGGTGAGGGGCGAGATGAAA CGGCGAGGAGTACAGAAAGCTGCACCAGGCTGCAGCTGGGTTGAGGTGGGTGGAGATGAT AGGGGGAGTGGAGCAGTGATGCATGCTTTTGTCAGTGGGGATAGGGGACACCCTGAGGCT GACATGATCTACGAAATGTTACATGCGCTGATAAGTTGGATGAGGGATTGCAGCCACCTG AGTAATACGACCCCATTATATTCAGTAGAACACTCATGA

Peptide Sequence

PEP ID	Os01t0818200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34841616:34845610:-1 gene:Os01g0818200 transcript:Os01t0818200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0818200-01);Hypothetical gene. (Os01t0818200-02)
Sequence	MAALRVPLRAILATPRAAGPRLLLPLHAHLLVSGRLAASPAALTSLVSLYARAAAPALHR HVAPLLLDRPSPPPLPCFNAGLSLPHPLALAVFRGLRHAYSPDAFSFPPLVSSAPSPPHL LALHALALRCGLAHDLFCASAMLRSCLRFGLADHARRLFGELPRRDVVVWNAMVNGFARL GCFGHAVECFRMMREDGEVEISSFTVTGILSVCTATADLGHGAAVHGLVVKSAFEQEVSV CNALVDLYGKCHKVDDAAMVFEGMADIVKDLFSWNSMLSALHYSADHAGTMKLFSRMRRV AVWPDAVTVAAVLPACAQTAALQVGREVHGYIVTSGLACHGALDSFACNALVDMYAKSGA LDEARRIFDRMQQRDVASWNIMIDGYASHGHGKEALELFCQMTEVERLLPDEITLLGALS ACSHSGLVEEGKNFLKRMKEEFSLEPQLEHYACVTDMLGRAGRLEEARKVVEDAGDVGVG AWRTYLAACRMHGDKERAQEAARMLMTTEQSESGGWVLLANTYGWEGNFDELEEVRGEMK RRGVQKAAPGCSWVEVGGDDRGSGAVMHAFVSGDRGHPEADMIYEMLHALISWMRDCSHL SNTTPLYSVEHS

Transcript Sequence

Transcript ID	Os01t0818200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34841616:34845610:-1 gene:Os01g0818200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0818200-01);Hypothetical gene. (Os01t0818200-02)
Sequence	GATTCGCGAGTTCTCCGGCTCGCCGCGATCACACGACTCCACGGCCGCGCGGCGGCGGCG TCGCCGGCTGATCCGCCCCCGCGAGCGAAGCGGAAAGGATGGCGGCGCTGCGCGTCCCGC TCCGCGCGATCCTCGCCACCCCGCGCGCGGCGGGGCCGCGCCTCCTCCTCCCGCTCCACG CCCACCTCCTCGTCTCCGGCCGCCTCGCCGCCTCCCCGGCCGCGCTCACCTCCCTCGTCT CGCTCTACGCGCGCGCCGCCGCCCCGGCGCTCCACCGCCACGTCGCCCCGCTCCTCCTGG ACCGACCGTCGCCCCCGCCGCTTCCCTGCTTCAACGCGGGGCTCTCCCTGCCCCACCCGC TCGCGCTCGCGGTGTTCCGCGGCCTCCGCCACGCGTACTCCCCGGACGCCTTCTCCTTCC CGCCCCTCGTCTCCTCCGCGCCCTCGCCGCCACACCTCCTCGCGCTCCACGCCCTCGCGC TCCGCTGCGGCCTCGCGCACGACCTCTTCTGCGCCAGCGCGATGCTCCGCTCGTGCCTCA GGTTTGGACTCGCGGACCACGCTCGCCGCCTGTTCGGCGAATTGCCGCGCCGGGACGTGG TGGTGTGGAACGCGATGGTCAATGGGTTTGCCAGGCTCGGGTGCTTCGGCCACGCCGTGG AGTGCTTCCGGATGATGAGGGAGGACGGTGAGGTCGAGATCAGCAGCTTCACCGTCACCG GCATCCTGTCGGTCTGTACCGCCACAGCGGATTTGGGGCACGGGGCTGCGGTTCATGGGC TAGTGGTGAAGTCCGCGTTTGAACAGGAGGTGTCTGTGTGCAATGCGTTGGTGGATCTTT ACGGGAAGTGCCACAAGGTGGATGATGCAGCAATGGTGTTTGAGGGGATGGCGGACATAG TCAAGGATCTGTTCAGCTGGAACTCAATGCTGTCAGCGCTGCATTACTCCGCTGACCATG CTGGGACAATGAAGCTGTTTTCAAGGATGAGACGCGTTGCTGTGTGGCCAGATGCAGTGA CCGTTGCGGCTGTTCTTCCTGCATGCGCGCAGACTGCAGCATTGCAGGTGGGAAGGGAAG TGCATGGGTACATTGTAACTAGTGGACTGGCTTGCCATGGCGCGTTGGACTCGTTTGCTT GTAATGCACTGGTGGACATGTATGCCAAGAGTGGGGCTTTGGATGAGGCTCGTCGCATAT TTGATCGGATGCAACAGCGGGATGTGGCATCATGGAATATTATGATTGATGGATATGCAT CGCACGGGCATGGGAAGGAAGCACTGGAGTTGTTCTGCCAGATGACAGAGGTGGAACGGC TTCTTCCAGATGAGATAACACTGTTGGGGGCATTGTCGGCTTGCAGCCATTCCGGGCTTG TTGAAGAAGGGAAGAATTTTCTGAAGAGAATGAAAGAGGAATTTTCTTTGGAGCCACAGT TAGAGCACTACGCATGTGTGACTGACATGCTTGGGCGTGCAGGGAGGCTGGAGGAGGCTA GAAAGGTAGTAGAGGATGCAGGGGATGTGGGGGTTGGTGCTTGGAGGACATACCTTGCAG CATGCCGGATGCATGGTGATAAGGAGAGAGCCCAAGAGGCAGCTAGGATGCTGATGACGA CAGAGCAGTCTGAGAGTGGTGGGTGGGTGCTGCTAGCGAATACATATGGCTGGGAGGGAA ACTTTGACGAACTGGAAGAGGTGAGGGGCGAGATGAAACGGCGAGGAGTACAGAAAGCTG CACCAGGCTGCAGCTGGGTTGAGGTGGGTGGAGATGATAGGGGGAGTGGAGCAGTGATGC ATGCTTTTGTCAGTGGGGATAGGGGACACCCTGAGGCTGACATGATCTACGAAATGTTAC ATGCGCTGATAAGTTGGATGAGGGATTGCAGCCACCTGAGTAATACGACCCCATTATATT CAGTAGAACACTCATGACTATTCATATAATCATATTTTGTTACAGAAGTCATAACAATCT TGCACAGAGCCGTGGACATGAAGTTTCTCAGAGATCAGAATGGTGCATCGTTGGATATTG ATAGGCTCGCTCCATCAAGACCAGTATTTAAACTTTGACCAGACAAGAGGTTTTCACCAA ATATCATAGTTCCTGCAGCCAGTGCTCCTGCTCCAAGCCCCATTCCAAAATTCGGTGTGC TGTTTTGACCTCCCATTCTTGGTGGCACATTTATGTAGGTCTGTGGCACTGGCCCCCTTG TTGGATACTGTGGTGTAAAGAAACTGGGGTTTGAAGTTGGATGTGGCAGGATTGGTGGAA CCATTGTGGGTTGGTAACTGTAGTTGCTTCCTGGTGGTGATTGTCCTGGGCGAGTGGCAG CGGTCACTGGCATGGAGTTGCTGTAATGATCAACATCTTGGGTGTACCCCTTAAAATGAC TGGAAGGCATTGGTGGATAATTGTAAACTGGACCATCTTCTATAGCTAATGTGATGCCAA CCTGATCTGGGTACTTCAATCCTTCCTGTGATCCTGCAAAATTATAAATGGACTGCATAA GTTTGATAAACTATAGATACGGATGGAGATATCAACAAATCCATGGGGTTTGTCTGACTT CTTCCTCCTAAGCTGAAAACTTGAAGTCTCCTCAGTTACTCCCGAAGGATCCTTGCCCTG TGAAAATTTATCAAAGTACTCCTTCATCTGGATGACTGCAGTTCCCTGGAGATGCTCCCT TAGAAATACGGGCTCTCTCCTGTAAACTTCAACTGTTAGTTCCATCTGCTGCATGCTCAT ATCATGTTCATCAACAGAAAGAGAGAACTTAGTTCCCCAATTCACATCAGAGTTCCCTGA TGCGTCAATCTTGGTGCAGTACTTGCTGTTTGGATCAATCCATGCAACTGAAAACCACTG TGGATTCAACAATGTTGATCTGCGGCCTAAACCACGCGCGGAGATTATGCAGAACTCGAC TGATATTTTCGTCATTTCTGTGAAGAGGAAAGTTGGGGTGGTATCAGAATTGTGATCCCG ACCCAGGGAAATGTTGCGGGATTTGTCATCCCATAGGTAACTTTTAGGGCTTTACCTTGC TACAAAGTTATTCGCGAACTTGCTTCGTGTTTACTCTATTGCTTCAGGGTCATGGAATCA ATTCTAAAGTTAGGCACTATGAGGGAGAAAAGGATAGTTGATAGATGATGACGACAGAAT CATTTTACGCTCTGCTACTAGTGATAATTTCTGGGATGCCGTTATGCTTCAACGTCTAGA GGTGCTTCAGAGTTCAGATTGCCAATCCGTTCAACCTAAGGAGAAGACTGTTTTCGTTCT CTGTTTAGTTTTCTCGTGTCAATTTTTATGTGTTGTAAAATTTTAGAGGTTCGGTTCCTG TTTATGTCCCTGCATCTCATCTGGTTGGCAGGTAGATTAATGCGCCTAGAAGGAATCATG TCTTAAGTTTGGGTAAGAAACAGCAAGTAAAAGGCATATTTTTCTTATGTAATGTGAGGA AGAATCGGGGAACCATCTGTTCCTTTCTTT