Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0817000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:34769362:34772195:-1 gene:Os01g0817000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os01t0817000-01)
Sequence

ATGTCAATGTGGCGCTTCTCCCGCTCCCTCCTCCGCGCCGCCGCCACCACCACCACCGCC
ACCGCGGCGTGTGCCTCCGCGTCCACGGCGGGGAAGCATGCCGCGTCGCGGAGGTGGGTG
ACGCCGCGTGAGCTCCAGAGGTGCTGGTACGCGTCGCTCCCGGCGGCGGCGGCGGCGGTG
CCGGGGAAGGACGGGGAGGCGGAGGTGACGGCGGAGGAGGCGAGGAGGCTGATGCGGCTG
GCGAACGTGGAGGCCCTGAAGCGGAAGCTCGGGGACGGCGAGGTGATCCCGTACGCGGAG
CTGCTGCGCGCGTGCGAGGAGGCCGGAGCCGCCAGGACGCGCGCCGAGGCCGCGGCGCTC
GCCGGCGCGCTCGACGAGGCCGGCGTCGTGCTGCTCTTCCGCGACAAGGTCTACCTCCAG
CCCGACAAGATCGTGGATCTTGTAAGAAAAGCTATGCCACTCGCGCTGACACCTGAGGAT
GATCCAAGAAAGGAAGAACTCAAGAAGCTGCAGACACAGTTGGAAGATATAAACAAGCTC
GCACACAAGCAAGTTCGTAGAATCCTCTGGTCTGGGCTAGGGTTCTTGATCACACAGGTT
GGGCTCTTTTTCAGGCTCACCTTCTGGGAGTTCTCGTGGGATGTCATGGAACCCATCACC
TTCTTCACCACCACGACAGGCCTGGTTGTAGGGTATGCCTACTTCCTCATCACATCAAGG
GATCCAACTTACCGAGACTTCATGGAGAGGCTGTTTGAGTCTCGGCAGAAGAAGCTGATT
CAGAGGCAGAACTTCAACCTGGATAGGTACCTGGAGCTCCAGAGGCGCTGTAAAGGTCCT
TTGGAGAAGATGTGTGGCACAAACCAAACTCCCAACCCTGACATGGCTCACCTTCACGAG
TTGTCCGTTAACAAATGA

Peptide Sequence

PEP ID

Os01t0817000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:34769362:34772195:-1 gene:Os01g0817000 transcript:Os01t0817000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os01t0817000-01)
Sequence

MSMWRFSRSLLRAAATTTTATAACASASTAGKHAASRRWVTPRELQRCWYASLPAAAAAV
PGKDGEAEVTAEEARRLMRLANVEALKRKLGDGEVIPYAELLRACEEAGAARTRAEAAAL
AGALDEAGVVLLFRDKVYLQPDKIVDLVRKAMPLALTPEDDPRKEELKKLQTQLEDINKL
AHKQVRRILWSGLGFLITQVGLFFRLTFWEFSWDVMEPITFFTTTTGLVVGYAYFLITSR
DPTYRDFMERLFESRQKKLIQRQNFNLDRYLELQRRCKGPLEKMCGTNQTPNPDMAHLHE
LSVNK

Transcript Sequence

Transcript ID

Os01t0817000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34769362:34772195:-1 gene:Os01g0817000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os01t0817000-01)
Sequence

GCCCGCGCGATTCACCCAAGAGAGATGTCAATGTGGCGCTTCTCCCGCTCCCTCCTCCGC
GCCGCCGCCACCACCACCACCGCCACCGCGGCGTGTGCCTCCGCGTCCACGGCGGGGAAG
CATGCCGCGTCGCGGAGGTGGGTGACGCCGCGTGAGCTCCAGAGGTGCTGGTACGCGTCG
CTCCCGGCGGCGGCGGCGGCGGTGCCGGGGAAGGACGGGGAGGCGGAGGTGACGGCGGAG
GAGGCGAGGAGGCTGATGCGGCTGGCGAACGTGGAGGCCCTGAAGCGGAAGCTCGGGGAC
GGCGAGGTGATCCCGTACGCGGAGCTGCTGCGCGCGTGCGAGGAGGCCGGAGCCGCCAGG
ACGCGCGCCGAGGCCGCGGCGCTCGCCGGCGCGCTCGACGAGGCCGGCGTCGTGCTGCTC
TTCCGCGACAAGGTCTACCTCCAGCCCGACAAGATCGTGGATCTTGTAAGAAAAGCTATG
CCACTCGCGCTGACACCTGAGGATGATCCAAGAAAGGAAGAACTCAAGAAGCTGCAGACA
CAGTTGGAAGATATAAACAAGCTCGCACACAAGCAAGTTCGTAGAATCCTCTGGTCTGGG
CTAGGGTTCTTGATCACACAGGTTGGGCTCTTTTTCAGGCTCACCTTCTGGGAGTTCTCG
TGGGATGTCATGGAACCCATCACCTTCTTCACCACCACGACAGGCCTGGTTGTAGGGTAT
GCCTACTTCCTCATCACATCAAGGGATCCAACTTACCGAGACTTCATGGAGAGGCTGTTT
GAGTCTCGGCAGAAGAAGCTGATTCAGAGGCAGAACTTCAACCTGGATAGGTACCTGGAG
CTCCAGAGGCGCTGTAAAGGTCCTTTGGAGAAGATGTGTGGCACAAACCAAACTCCCAAC
CCTGACATGGCTCACCTTCACGAGTTGTCCGTTAACAAATGACAACCTTCGCTCAAACAC
TAATCTACCATTGCTTCTTTTCTTGTTCAATTTTCTTGGAGTAATGATCAAGAAAATACT
AGCAAAGCTGATATTTTGCATTGCCGAGGTGGACATATTTCTTTTGCGACCCTTTTTATG
GTCTTCCATTATGCAAATGTGTAGGTTTAATAGCTACTATAATCCTTTTTTGTAACAATG
CTGAAGCACAAGCACATGATAGTTGGAAGGAAAGCTTTACATGTATGATCATATGACCAG
AAGCTTTACCGAGAGCTGTGTATCTCTGCAGCCACTGCTAATCTACTGTGCAATGTGGAC
AGATTCATTAGCTTTATGGTCTTTTTGGTCG