Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0816000-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:34689925:34691627:1 gene:Os01g0816000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os01t0816000-00)
Sequence	ATGCTGCGGAGTCTCCTCGCGAGAGCAATCCCGCGATCCTCCGCCGCCGCCGCCACCACC CGCGGATTCACCGATCCGCGGAGCTTTCCTCTACTCTTTCGCGAAGGTTCGCGTCTCTCC ACTTCGCAGGGCGGCATCGGCAATGGCGGCGGCGGCGGCGGCGGCGGCAATGGCGGTGAT GGCGAGGAGGATGACCCCTTCTCGTTCGCGGACCTCCAGAAGCTGCCGCCGGACGTCGCG CGTGACGTGGAGGCCGTCGTCGGCGCGGCCGAGGGGTTCCATGCGGACGCCGCGCGGGCC AGGGGCCTCCTGGAGCGGTGCGGCGCCACGGCGTCCGAGCCGGTCGTGGTGGCCGTGCTG GACCGCCTCCGCAACAGCTGCGCCGCGGCGCACGCCGCGTTCCGGTGGGCCTCGGCGCAG CCAGGGTACGCGCCAGGGCGGCACGCGTGCCACTCCATGCTCGCCATCCTCGCGAAGCAC CGCCGCTTCGACGACGCACGCGCCCTGCTCGACCAAATGCGCCGCTCGTCGCTTGCGTCT CCGGCCGCGGTGATGCTTCTCATCCGGCGCTACTGCGCTGCACGGGACGTCGCCGGCGCC GTCGCGGCGTTCCGTGCGCTCCCGAACCTTGGTTTCCGGCCTGGCGTCGCAGAGTTCCAT GGCCTCCTGACCGCGCTTTGCCGGTACAAGAACGTCCAGGATGCGGAGCACCTGCTTCTG TCCAGCGAGAAGGAGTTCCCTTTCGAGACCAAGAGTTTTAACGTTGTGCTCAATGGCTGG TGCAACATGGTCCGCAGTGTGCGGGAGGCGAAGAGGTTTTGGAATGCCATGGAAATTAAG GGTATTAAGAGGGACGTGGTATCATATGGGAGTATGATTTCGTGCTTCTCGAAAGCCGGA AGTTTGGACACTGTCATGAAGCTCTTTAACCGCATGAAGGAGGCTGGTGTTATACCAGAC AGGAAAATCTACAATGCAGTTGTCTACGCTCTCGCCAAGGGACAGTGTGTGAATGAGGCA AAGGCTCTTGTCCGGAGCATGGAGGAGAAGGGGGTTGCCCCAGACACGGCCACTTTCAAC TCCCTCATTAGACCTCTTTGCAAGGCTCGTCAGGTTCAGGAGGCAAGGAAAATGCTTGAT GACATGTTAGGGAGAGGGCTGTCACCTTCAGTGAGAACATTTCATGCGTTACTCGATGTG GCTAGAAGCCCCATTGAGGTGTTTGATCTGTTGGATAAGATGAAAGAATTGCAGTGTGAC CCAGAGATGGACACTTTCATTATGTTGATCAGGAAATTCTGCCGGTGGAGGCAACATGAC AGTGTGGAGAAGCTCTGGAGTGCAATGCCTGCAAATGGGCTAAGCCCTGATAGGAGTGCG TATATTGTATTGATACACGGTTTATTCCTTAATGGGAGACTGGAGGAGTCAGCAAAGTAT TACGAAGAGATGAAAGCCAAGGGATTTCCACCTGAGAAGAAGACTGAAGAAATGATACAG GCTTGGCTTTCAGGCAGAGAGCTTGCCAAGGCTTCAGCTTCAGTGGGTTCAAGGGGTGGT TCTGTGTCTCTCAGATCAAATCCTCGAAAGTGA

Peptide Sequence

PEP ID	Os01t0816000-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:34689925:34691627:1 gene:Os01g0816000 transcript:Os01t0816000-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os01t0816000-00)
Sequence	MLRSLLARAIPRSSAAAATTRGFTDPRSFPLLFREGSRLSTSQGGIGNGGGGGGGGNGGD GEEDDPFSFADLQKLPPDVARDVEAVVGAAEGFHADAARARGLLERCGATASEPVVVAVL DRLRNSCAAAHAAFRWASAQPGYAPGRHACHSMLAILAKHRRFDDARALLDQMRRSSLAS PAAVMLLIRRYCAARDVAGAVAAFRALPNLGFRPGVAEFHGLLTALCRYKNVQDAEHLLL SSEKEFPFETKSFNVVLNGWCNMVRSVREAKRFWNAMEIKGIKRDVVSYGSMISCFSKAG SLDTVMKLFNRMKEAGVIPDRKIYNAVVYALAKGQCVNEAKALVRSMEEKGVAPDTATFN SLIRPLCKARQVQEARKMLDDMLGRGLSPSVRTFHALLDVARSPIEVFDLLDKMKELQCD PEMDTFIMLIRKFCRWRQHDSVEKLWSAMPANGLSPDRSAYIVLIHGLFLNGRLEESAKY YEEMKAKGFPPEKKTEEMIQAWLSGRELAKASASVGSRGGSVSLRSNPRK

Transcript Sequence

Transcript ID	Os01t0816000-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34689925:34691627:1 gene:Os01g0816000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein prenyltransferase domain containing protein. (Os01t0816000-00)
Sequence	ATGCTGCGGAGTCTCCTCGCGAGAGCAATCCCGCGATCCTCCGCCGCCGCCGCCACCACC CGCGGATTCACCGATCCGCGGAGCTTTCCTCTACTCTTTCGCGAAGGTTCGCGTCTCTCC ACTTCGCAGGGCGGCATCGGCAATGGCGGCGGCGGCGGCGGCGGCGGCAATGGCGGTGAT GGCGAGGAGGATGACCCCTTCTCGTTCGCGGACCTCCAGAAGCTGCCGCCGGACGTCGCG CGTGACGTGGAGGCCGTCGTCGGCGCGGCCGAGGGGTTCCATGCGGACGCCGCGCGGGCC AGGGGCCTCCTGGAGCGGTGCGGCGCCACGGCGTCCGAGCCGGTCGTGGTGGCCGTGCTG GACCGCCTCCGCAACAGCTGCGCCGCGGCGCACGCCGCGTTCCGGTGGGCCTCGGCGCAG CCAGGGTACGCGCCAGGGCGGCACGCGTGCCACTCCATGCTCGCCATCCTCGCGAAGCAC CGCCGCTTCGACGACGCACGCGCCCTGCTCGACCAAATGCGCCGCTCGTCGCTTGCGTCT CCGGCCGCGGTGATGCTTCTCATCCGGCGCTACTGCGCTGCACGGGACGTCGCCGGCGCC GTCGCGGCGTTCCGTGCGCTCCCGAACCTTGGTTTCCGGCCTGGCGTCGCAGAGTTCCAT GGCCTCCTGACCGCGCTTTGCCGGTACAAGAACGTCCAGGATGCGGAGCACCTGCTTCTG TCCAGCGAGAAGGAGTTCCCTTTCGAGACCAAGAGTTTTAACGTTGTGCTCAATGGCTGG TGCAACATGGTCCGCAGTGTGCGGGAGGCGAAGAGGTTTTGGAATGCCATGGAAATTAAG GGTATTAAGAGGGACGTGGTATCATATGGGAGTATGATTTCGTGCTTCTCGAAAGCCGGA AGTTTGGACACTGTCATGAAGCTCTTTAACCGCATGAAGGAGGCTGGTGTTATACCAGAC AGGAAAATCTACAATGCAGTTGTCTACGCTCTCGCCAAGGGACAGTGTGTGAATGAGGCA AAGGCTCTTGTCCGGAGCATGGAGGAGAAGGGGGTTGCCCCAGACACGGCCACTTTCAAC TCCCTCATTAGACCTCTTTGCAAGGCTCGTCAGGTTCAGGAGGCAAGGAAAATGCTTGAT GACATGTTAGGGAGAGGGCTGTCACCTTCAGTGAGAACATTTCATGCGTTACTCGATGTG GCTAGAAGCCCCATTGAGGTGTTTGATCTGTTGGATAAGATGAAAGAATTGCAGTGTGAC CCAGAGATGGACACTTTCATTATGTTGATCAGGAAATTCTGCCGGTGGAGGCAACATGAC AGTGTGGAGAAGCTCTGGAGTGCAATGCCTGCAAATGGGCTAAGCCCTGATAGGAGTGCG TATATTGTATTGATACACGGTTTATTCCTTAATGGGAGACTGGAGGAGTCAGCAAAGTAT TACGAAGAGATGAAAGCCAAGGGATTTCCACCTGAGAAGAAGACTGAAGAAATGATACAG GCTTGGCTTTCAGGCAGAGAGCTTGCCAAGGCTTCAGCTTCAGTGGGTTCAAGGGGTGGT TCTGTGTCTCTCAGATCAAATCCTCGAAAGTGATTGGATGATGATTGCCCTTAAAAAGTG ATTTATGAAAAGATATGAAGTAGGGGAGGAAGATTCGCTTTGTTCTTCATGAAGAACTGC TAGAAACATTGAAGAAATCATTT