Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0815700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34678036:34682189:1 gene:Os01g0815700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RanBP2-type domain containing protein. (Os01t0815700-01)
Sequence	ATGGGCGGCGCCTCCAAGCTGCTCTCCTCCCTCCTCCTCACCTCCTCGCCGCTCCGCCTC CGCCCCTCCGCCGGCGCCTTCGCGCTCTTCCTCTCCCCGCCCGCGTCCCGCCGCCACCTG CTGCTCTCCTCCCCGGCTCCCCTCCGCACCCTCTCCACCGCCTCCGCCTCCGCCGCCGCC GGCGGAGCCTCTTCGGATTCGTACAGCTCGGGCTCGTGCCACTCTCCTTTTCCCGAGTGG TCACGCCTGGTCGACCGCCTCTCGGCGGCGGGCTACGGCGCGCGCGCACCTTCCCCCGCC GATGAGCTCGACCTCGACCCCGAATGCGGCCTGTCGTCCGACGCTGAGGCCGCGGTGTCC TCCTTCCTCGCCTTCGCACGCGACCGGCCTGACCTCCTCAGGTCTCTGCCGAGGAAGGAC GTGGAGGTCTTGGTGGCCAACGCGGCGCCGGCTCTGTTCAAGGACGGGGAGGCATCAGAG CTGCGTCTGCGGCAATACCTTGCCGGGGAAGGGAGCGATGTGACTCAGTCAGAGAGAGCG GAAACCATCGATATTGTTCGGTACTTATTAAGTTACGCATACGGTTCTCCGGTCAGCTAT TTGAAAGATAAGGAACTGACTGATTCAGCTGTGAGAAATATCTTGGCTGAGTTTGTAAGT TTTAGTGGATTTCCTCAAACCTCCAGTTACGCCGAATCAACAGCTAGGCAAAATACATTG GGCTCTAGGCCTCCAGGACAAAATATTGAAATGAAGCGAGGTGACTGGATCTGTACAAGA TGTAGCTTTATGAATTTCGCTAGAAATGCGAGATGCCTTGAGTGCAATGAGCATCGACCA AAGAAGATGTTGACTGGTGGAGAGTGGGAATGCCCTCAGTGTGTGTATTATAATTATGGG AGGAACATGTCATGCTTACGATGTAGTTGTAAAAGACCAGGAACAATACCACCAAATCCT GCTGGTGCTGGTTTAGATGGAGTGGCACAGTTTCTTAATACATCCATTGTTGGTAAATCT GAAATTGAGAGAAAACTCGCTGAAAATGACCAGAAGGCAGAAAGGTGGTTGAACAAAGTA TCCCAACTTGATGATTCTGCTGATTTAAGTAGTCTAGCAGCCGACGAGGATTTTCCTGAG ATCATGCCGATTAGGAAGGGGGTCAATAAATTTGTGGTTAGCACACGCAAGACACCATTG GAGAGAAGACTGGCAAATGCACAGTACAGCAGTAACAATAGCCCCCAAGATGGATCATCT GACTCCAAGATAAGTAAAACATTAGACAGGATTCTTGGGCGTTCTACATCTACTTCGGTG CAGAACAATCAATCTGGTGATGGAGATGTAAATACTAGTTCAAATAAAACAACAAGCAAT CTTGGTGGCATTGATCCTGTTCCTTTCGTGCCATTATCTGCAGATCAGTTTGCTAAGCCA CAAAATAGTTTTGGTGATGGACAATCAGACACCCAAATAAGTACAGAGGCTGATTCCATG GCAAAAAGCCAAATGGATTCAATGGAGAGGAGAGATGACAAGCGATCATTTGATACCACT GAGGAATGGTCCAAGAAAGTTGCAGAGCTCAGTAATGTAAAGGACTTTCCAAGTGCAATT TCTGATCAAGACTTTCCTGAGATTATGCCAATGAGGAAAGGTGAGAATCGGTTTGTTATT AGTAAGAAGAAAGACCGCTCACTGACATCGCCACAGTACAAAAGGCGCAGTGTGCTCGAG CATGCTGATAATTCCAATTTCATCCCATTTGTCCCATTCCCTCCTGATTACTTTGCCAAG AAAAATAAGCCTGTGGAGAATTCATCAGATGCAGGAATAGTGCCAGAAGGCCCTCCATCA GCTGAAAAATTACCAGAAACAAAATATTCATCTGGAAATCTGGGAAATTTTCAGAACAGC TCACAGGTGATGGGCAGTCAGGCAGCAAACAACATGAACAATGAGAACAGGAACGGAAAT TATCCACATCAAAACTTGAGTACAAGTGGTTATGGGTATGGTGAAAGCATCACTTATCAG CATCAACCACAATCTCAAGGGATGGTCGGTCGTTCTGGTGGTGCTTCTGAAACTGGCACT CGGAATGCAAACAACAACCAGGGAAGCTTTAGCGAAAGCAGAGATAGATCTACTTACAAC AGGGGAAGCCATTCCGCACAGCCACCTTATAAGTCAGGTTATGGTAACAATAACAATGCT TGGAGCAGTAACAACAATGGCAGCAATAATGCTTGGAGCAGCACCAGAGATTATGACAAT GGTGGTCGGAGCGACAACAATCCCTATTACAACAGCAGTACTTGGAGCAGCAACAGCACC TATAGCAACAACGCTGCCTGGAGCAGCAATAGCAGCTACAACAGTAACAGCGCATGGAGC AGCAATAGCAGTTACAACAGTAACAGCGCATGGAGCAACAATAGCAACAACAGTTGGAGT GGCTCATACTCTGATAATGGCGGCACCGGTAGTGGCAGTTCCGCATCTAGACCTAACCAA ACAGCAGGCTACTCAAGTTACGGAGAAAGTGCGAATAGAGGATATACTGGAAAGAGCTTG GAAGGATCTGCAGTGAAGGATCCTGATCCATTGGATATGTCTGAGGAAGCTAAGGCCGAG AGATGGTTTAGGAGGGCAGCACAGATAAAGGACATCTCCGAGCTCGCCAACATCCCTGAC GAGGACTTCCCGGAGATAATGCCGATGAGGAAGGGCGTGAACAGGTTCGTCGTCAGCAAG AGGAAGACACCACTGGAGAGGAGATTAACATCACCTCAGTACAGAAGAAACCTGCCTATC GTAAGTTCTGAACCGAACGAAGACGCTAACTAA

Peptide Sequence

PEP ID	Os01t0815700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34678036:34682189:1 gene:Os01g0815700 transcript:Os01t0815700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RanBP2-type domain containing protein. (Os01t0815700-01)
Sequence	MGGASKLLSSLLLTSSPLRLRPSAGAFALFLSPPASRRHLLLSSPAPLRTLSTASASAAA GGASSDSYSSGSCHSPFPEWSRLVDRLSAAGYGARAPSPADELDLDPECGLSSDAEAAVS SFLAFARDRPDLLRSLPRKDVEVLVANAAPALFKDGEASELRLRQYLAGEGSDVTQSERA ETIDIVRYLLSYAYGSPVSYLKDKELTDSAVRNILAEFVSFSGFPQTSSYAESTARQNTL GSRPPGQNIEMKRGDWICTRCSFMNFARNARCLECNEHRPKKMLTGGEWECPQCVYYNYG RNMSCLRCSCKRPGTIPPNPAGAGLDGVAQFLNTSIVGKSEIERKLAENDQKAERWLNKV SQLDDSADLSSLAADEDFPEIMPIRKGVNKFVVSTRKTPLERRLANAQYSSNNSPQDGSS DSKISKTLDRILGRSTSTSVQNNQSGDGDVNTSSNKTTSNLGGIDPVPFVPLSADQFAKP QNSFGDGQSDTQISTEADSMAKSQMDSMERRDDKRSFDTTEEWSKKVAELSNVKDFPSAI SDQDFPEIMPMRKGENRFVISKKKDRSLTSPQYKRRSVLEHADNSNFIPFVPFPPDYFAK KNKPVENSSDAGIVPEGPPSAEKLPETKYSSGNLGNFQNSSQVMGSQAANNMNNENRNGN YPHQNLSTSGYGYGESITYQHQPQSQGMVGRSGGASETGTRNANNNQGSFSESRDRSTYN RGSHSAQPPYKSGYGNNNNAWSSNNNGSNNAWSSTRDYDNGGRSDNNPYYNSSTWSSNST YSNNAAWSSNSSYNSNSAWSSNSSYNSNSAWSNNSNNSWSGSYSDNGGTGSGSSASRPNQ TAGYSSYGESANRGYTGKSLEGSAVKDPDPLDMSEEAKAERWFRRAAQIKDISELANIPD EDFPEIMPMRKGVNRFVVSKRKTPLERRLTSPQYRRNLPIVSSEPNEDAN

Transcript Sequence

Transcript ID	Os01t0815700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34678036:34682189:1 gene:Os01g0815700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RanBP2-type domain containing protein. (Os01t0815700-01)
Sequence	CAAGCAAAACCCTTCCCTTCCTCGGAGAGAAGGTATCGGCGGCGAGATTTTCCTCCCTCT CGCCGTCGCCATGGGCGGCGCCTCCAAGCTGCTCTCCTCCCTCCTCCTCACCTCCTCGCC GCTCCGCCTCCGCCCCTCCGCCGGCGCCTTCGCGCTCTTCCTCTCCCCGCCCGCGTCCCG CCGCCACCTGCTGCTCTCCTCCCCGGCTCCCCTCCGCACCCTCTCCACCGCCTCCGCCTC CGCCGCCGCCGGCGGAGCCTCTTCGGATTCGTACAGCTCGGGCTCGTGCCACTCTCCTTT TCCCGAGTGGTCACGCCTGGTCGACCGCCTCTCGGCGGCGGGCTACGGCGCGCGCGCACC TTCCCCCGCCGATGAGCTCGACCTCGACCCCGAATGCGGCCTGTCGTCCGACGCTGAGGC CGCGGTGTCCTCCTTCCTCGCCTTCGCACGCGACCGGCCTGACCTCCTCAGGTCTCTGCC GAGGAAGGACGTGGAGGTCTTGGTGGCCAACGCGGCGCCGGCTCTGTTCAAGGACGGGGA GGCATCAGAGCTGCGTCTGCGGCAATACCTTGCCGGGGAAGGGAGCGATGTGACTCAGTC AGAGAGAGCGGAAACCATCGATATTGTTCGGTACTTATTAAGTTACGCATACGGTTCTCC GGTCAGCTATTTGAAAGATAAGGAACTGACTGATTCAGCTGTGAGAAATATCTTGGCTGA GTTTGTAAGTTTTAGTGGATTTCCTCAAACCTCCAGTTACGCCGAATCAACAGCTAGGCA AAATACATTGGGCTCTAGGCCTCCAGGACAAAATATTGAAATGAAGCGAGGTGACTGGAT CTGTACAAGATGTAGCTTTATGAATTTCGCTAGAAATGCGAGATGCCTTGAGTGCAATGA GCATCGACCAAAGAAGATGTTGACTGGTGGAGAGTGGGAATGCCCTCAGTGTGTGTATTA TAATTATGGGAGGAACATGTCATGCTTACGATGTAGTTGTAAAAGACCAGGAACAATACC ACCAAATCCTGCTGGTGCTGGTTTAGATGGAGTGGCACAGTTTCTTAATACATCCATTGT TGGTAAATCTGAAATTGAGAGAAAACTCGCTGAAAATGACCAGAAGGCAGAAAGGTGGTT GAACAAAGTATCCCAACTTGATGATTCTGCTGATTTAAGTAGTCTAGCAGCCGACGAGGA TTTTCCTGAGATCATGCCGATTAGGAAGGGGGTCAATAAATTTGTGGTTAGCACACGCAA GACACCATTGGAGAGAAGACTGGCAAATGCACAGTACAGCAGTAACAATAGCCCCCAAGA TGGATCATCTGACTCCAAGATAAGTAAAACATTAGACAGGATTCTTGGGCGTTCTACATC TACTTCGGTGCAGAACAATCAATCTGGTGATGGAGATGTAAATACTAGTTCAAATAAAAC AACAAGCAATCTTGGTGGCATTGATCCTGTTCCTTTCGTGCCATTATCTGCAGATCAGTT TGCTAAGCCACAAAATAGTTTTGGTGATGGACAATCAGACACCCAAATAAGTACAGAGGC TGATTCCATGGCAAAAAGCCAAATGGATTCAATGGAGAGGAGAGATGACAAGCGATCATT TGATACCACTGAGGAATGGTCCAAGAAAGTTGCAGAGCTCAGTAATGTAAAGGACTTTCC AAGTGCAATTTCTGATCAAGACTTTCCTGAGATTATGCCAATGAGGAAAGGTGAGAATCG GTTTGTTATTAGTAAGAAGAAAGACCGCTCACTGACATCGCCACAGTACAAAAGGCGCAG TGTGCTCGAGCATGCTGATAATTCCAATTTCATCCCATTTGTCCCATTCCCTCCTGATTA CTTTGCCAAGAAAAATAAGCCTGTGGAGAATTCATCAGATGCAGGAATAGTGCCAGAAGG CCCTCCATCAGCTGAAAAATTACCAGAAACAAAATATTCATCTGGAAATCTGGGAAATTT TCAGAACAGCTCACAGGTGATGGGCAGTCAGGCAGCAAACAACATGAACAATGAGAACAG GAACGGAAATTATCCACATCAAAACTTGAGTACAAGTGGTTATGGGTATGGTGAAAGCAT CACTTATCAGCATCAACCACAATCTCAAGGGATGGTCGGTCGTTCTGGTGGTGCTTCTGA AACTGGCACTCGGAATGCAAACAACAACCAGGGAAGCTTTAGCGAAAGCAGAGATAGATC TACTTACAACAGGGGAAGCCATTCCGCACAGCCACCTTATAAGTCAGGTTATGGTAACAA TAACAATGCTTGGAGCAGTAACAACAATGGCAGCAATAATGCTTGGAGCAGCACCAGAGA TTATGACAATGGTGGTCGGAGCGACAACAATCCCTATTACAACAGCAGTACTTGGAGCAG CAACAGCACCTATAGCAACAACGCTGCCTGGAGCAGCAATAGCAGCTACAACAGTAACAG CGCATGGAGCAGCAATAGCAGTTACAACAGTAACAGCGCATGGAGCAACAATAGCAACAA CAGTTGGAGTGGCTCATACTCTGATAATGGCGGCACCGGTAGTGGCAGTTCCGCATCTAG ACCTAACCAAACAGCAGGCTACTCAAGTTACGGAGAAAGTGCGAATAGAGGATATACTGG AAAGAGCTTGGAAGGATCTGCAGTGAAGGATCCTGATCCATTGGATATGTCTGAGGAAGC TAAGGCCGAGAGATGGTTTAGGAGGGCAGCACAGATAAAGGACATCTCCGAGCTCGCCAA CATCCCTGACGAGGACTTCCCGGAGATAATGCCGATGAGGAAGGGCGTGAACAGGTTCGT CGTCAGCAAGAGGAAGACACCACTGGAGAGGAGATTAACATCACCTCAGTACAGAAGAAA CCTGCCTATCGTAAGTTCTGAACCGAACGAAGACGCTAACTAAAAAAAAAAGGTGTGGTT ACGAAATTTCCAGTGCAACAGCGAGGAGTTAAAACACCAAGGGCATTCTTTACAGCAGTT TTGTGATAATAAGCCAGCACAAGACGGTTCTCTGTATTGTAAAATTTTTGTTCTGAACCT TCCATTTATTTTGTACTTCCAGGGAATCCATGTTGTATATGAAACCTTCGATACTGAAAC TCTGCATGACACTGTTGAACTATTACTTTTCTGCGGCTTC