Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0814300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34636155:34639624:1 gene:Os01g0814300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0814300-01)
Sequence	ATGCACCACCAGCAGCTCAAACCGGGCGAGGCCGCCTCGCTCCCGCGCCACCTCCTCGAG GCCCACGTCGTCGCGCTCGTCCGCCGATGCTGCCCGGGCCTCCTCGCGCTCCGCGCCGCA CACGCGCGCCTCATCAGGCTCCGCCTCCCTCGCCTCACAGCCGCCTTCGCGCTCTCCAAG CTCCTCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGGCGCCGCGCCATCCTACGCC CGCAACCTGTTCGACCAAATCCCCGAGCCGACCGCCTTCTGCTACAACTCCCTCATCCGC GCGCTCTCCTCCGCCGCCGGCGCCGCCCCGGCCGCGGACACCGTCCTGGTCTACCGCCGA ATGCTGCGCGCCGGGTCCCCGCTCCCCAACTCCTTCACGCTCGCGTTCGCGCTCAAGGCG TGCTCCGTCGTGCCGGCTCTCGGGGAGGGCCGGCAGCTGCATTCGCAGGCTTTCCGCCGG GGGCTTGAACCGAGCCCCTACGTGCAGACCGGGCTGCTTAACCTCTATGCCAAGTGCGAG GAGGTTGCGCTCGCCAGGACAGTGTTCGATGGCATGGTTGGGGACAAGAATTTGGCCGCG TGGAGTGCCATGATCGGCGGGTACTCCAGGGTCGGGATGGTTAACGAGGCTTTGGGGCTG TTCCGAGAGATGCAGGCAGCAGATGTGAACCCGGATGAGGTCACCATGGTTAGTGTCATT TCGGCATGCGCCAAGGCAGGGGCGCTTGATTTGGGGAGATGGGTGCATGCTTTTATCGAT AGGAAAGGTATCACAGTCGATCTTGAGCTGAGCACAGCATTAATTGATATGTATGCAAAG TGTGGGTTGATAGAGCGGGCAAAGGGAGTGTTTGATGCAATGGCGGAGAGAGATACAAAG GCATGGAGTGCAATGATCGTTGGATTGGCGATACATGGTCTTGTAGAGGTTGCCTTGAAG CTTTTCTCAAGAATGCTAGAGCTTAAGGTGAGGCCTAACAATGTCACCTTTATAGGTGTG TTGTCAGCCTGTGCTCACAGTGGGTTAGTGAATGAAGGCCGACGATATTGGTCTACTATG CAAGAATTGGGTATCAAACCTTCAATGGAGAACTATGGTTGCATGGTTGACCTTTTCTGT CGTTCTAGCCTTTTGGATGAAGCATATTCATTTGTTACTGGCATGGCTATCCCTCCAAAT TCAGTAATTTGGAGGACTCTTCTTGTTGCCAGTAAGAACTCAAATAGATTTGATATAGTG CAATCAGCATCAAAGAAGCTCCTTGAGTTAGAACCTTGCAATCCAGAAAACTATGTTCTA CTCTCAAATTTGTACGCATCGAATTCCCAGTGGGATAGAGTAAGCTATATGAGGAAAAAG ATGAAGGAAAACAATGTTAATGTTGTTGCTGGCTGTAGTTCGATTGAAATTAATGGTTAC CTTCACAAGTTTGTGGTGAGTGATGATTCACACCCTGAAATAAAGGAGATAAGACTGTTA CTGAGGGAAATAGCTGACCGTGTGGTACGTGCTGGCCACAAGCCTTGGACTGCAGCCGTG CTTCATGATGTTGGTGAAGAGGAAAAAGAAGTTGCACTTTGTGAGCACAGTGAAAGGTTA GCCATTGCATATGGTTTGTTGAAGACAAAAGCGCCTCACGTCATTCGGGTGGTAAAGAAT TTGAGATTCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGA GAAATCATTGTTAGGGACCGTGTTCGTTTCCATAGATTTGTTGAGGGAAGTTGTTCTTGC AAGGACTTTTGGTGA

Peptide Sequence

PEP ID	Os01t0814300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34636155:34639624:1 gene:Os01g0814300 transcript:Os01t0814300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0814300-01)
Sequence	MHHQQLKPGEAASLPRHLLEAHVVALVRRCCPGLLALRAAHARLIRLRLPRLTAAFALSK LLASSSSSSSSSCGAAPSYARNLFDQIPEPTAFCYNSLIRALSSAAGAAPAADTVLVYRR MLRAGSPLPNSFTLAFALKACSVVPALGEGRQLHSQAFRRGLEPSPYVQTGLLNLYAKCE EVALARTVFDGMVGDKNLAAWSAMIGGYSRVGMVNEALGLFREMQAADVNPDEVTMVSVI SACAKAGALDLGRWVHAFIDRKGITVDLELSTALIDMYAKCGLIERAKGVFDAMAERDTK AWSAMIVGLAIHGLVEVALKLFSRMLELKVRPNNVTFIGVLSACAHSGLVNEGRRYWSTM QELGIKPSMENYGCMVDLFCRSSLLDEAYSFVTGMAIPPNSVIWRTLLVASKNSNRFDIV QSASKKLLELEPCNPENYVLLSNLYASNSQWDRVSYMRKKMKENNVNVVAGCSSIEINGY LHKFVVSDDSHPEIKEIRLLLREIADRVVRAGHKPWTAAVLHDVGEEEKEVALCEHSERL AIAYGLLKTKAPHVIRVVKNLRFCPDCHEVAKIVSKSYDREIIVRDRVRFHRFVEGSCSC KDFW

Transcript Sequence

Transcript ID	Os01t0814300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34636155:34639624:1 gene:Os01g0814300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0814300-01)
Sequence	CGCCGCCGAGGCCGACCGAGCCCAACGGACGCGGTGTGCCGGTGCCCGGTGATTCATCTC TCAGCGCGGCACGACGGCACGAGCACACGCCGCGGTGGTAGTGTAGCTGCTACTACCGAG CCGTCGCGGCGTCGTCTACTTTGCCGCGCGTGCCGATCCCCACGCGTACGCGCAGCGCAT GCACCACCAGCAGCTCAAACCGGGCGAGGCCGCCTCGCTCCCGCGCCACCTCCTCGAGGC CCACGTCGTCGCGCTCGTCCGCCGATGCTGCCCGGGCCTCCTCGCGCTCCGCGCCGCACA CGCGCGCCTCATCAGGCTCCGCCTCCCTCGCCTCACAGCCGCCTTCGCGCTCTCCAAGCT CCTCGCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCGGCGCCGCGCCATCCTACGCCCG CAACCTGTTCGACCAAATCCCCGAGCCGACCGCCTTCTGCTACAACTCCCTCATCCGCGC GCTCTCCTCCGCCGCCGGCGCCGCCCCGGCCGCGGACACCGTCCTGGTCTACCGCCGAAT GCTGCGCGCCGGGTCCCCGCTCCCCAACTCCTTCACGCTCGCGTTCGCGCTCAAGGCGTG CTCCGTCGTGCCGGCTCTCGGGGAGGGCCGGCAGCTGCATTCGCAGGCTTTCCGCCGGGG GCTTGAACCGAGCCCCTACGTGCAGACCGGGCTGCTTAACCTCTATGCCAAGTGCGAGGA GGTTGCGCTCGCCAGGACAGTGTTCGATGGCATGGTTGGGGACAAGAATTTGGCCGCGTG GAGTGCCATGATCGGCGGGTACTCCAGGGTCGGGATGGTTAACGAGGCTTTGGGGCTGTT CCGAGAGATGCAGGCAGCAGATGTGAACCCGGATGAGGTCACCATGGTTAGTGTCATTTC GGCATGCGCCAAGGCAGGGGCGCTTGATTTGGGGAGATGGGTGCATGCTTTTATCGATAG GAAAGGTATCACAGTCGATCTTGAGCTGAGCACAGCATTAATTGATATGTATGCAAAGTG TGGGTTGATAGAGCGGGCAAAGGGAGTGTTTGATGCAATGGCGGAGAGAGATACAAAGGC ATGGAGTGCAATGATCGTTGGATTGGCGATACATGGTCTTGTAGAGGTTGCCTTGAAGCT TTTCTCAAGAATGCTAGAGCTTAAGGTGAGGCCTAACAATGTCACCTTTATAGGTGTGTT GTCAGCCTGTGCTCACAGTGGGTTAGTGAATGAAGGCCGACGATATTGGTCTACTATGCA AGAATTGGGTATCAAACCTTCAATGGAGAACTATGGTTGCATGGTTGACCTTTTCTGTCG TTCTAGCCTTTTGGATGAAGCATATTCATTTGTTACTGGCATGGCTATCCCTCCAAATTC AGTAATTTGGAGGACTCTTCTTGTTGCCAGTAAGAACTCAAATAGATTTGATATAGTGCA ATCAGCATCAAAGAAGCTCCTTGAGTTAGAACCTTGCAATCCAGAAAACTATGTTCTACT CTCAAATTTGTACGCATCGAATTCCCAGTGGGATAGAGTAAGCTATATGAGGAAAAAGAT GAAGGAAAACAATGTTAATGTTGTTGCTGGCTGTAGTTCGATTGAAATTAATGGTTACCT TCACAAGTTTGTGGTGAGTGATGATTCACACCCTGAAATAAAGGAGATAAGACTGTTACT GAGGGAAATAGCTGACCGTGTGGTACGTGCTGGCCACAAGCCTTGGACTGCAGCCGTGCT TCATGATGTTGGTGAAGAGGAAAAAGAAGTTGCACTTTGTGAGCACAGTGAAAGGTTAGC CATTGCATATGGTTTGTTGAAGACAAAAGCGCCTCACGTCATTCGGGTGGTAAAGAATTT GAGATTCTGTCCAGATTGCCATGAAGTAGCAAAAATAGTAAGCAAGTCATATGATAGAGA AATCATTGTTAGGGACCGTGTTCGTTTCCATAGATTTGTTGAGGGAAGTTGTTCTTGCAA GGACTTTTGGTGATTCCTCAACCGATTGAATATTGTCCCACAGCTGGGGGTGAGGGATGT GGCGTTGAAACTCTTTGGAGTCCATCACCAAACAATAATGACTACTGATCACTGAGCATA ATTTGGTATCCAGATAAAAAGGAATCCTGGAACTGACTGGACCCTCTTGCCCTGATACAA GTATACAACCTCTCAAGGCATGGTTCATGGCTGCCCGCTCTAACTGGTAATGCAACTACA ATGTCAATTGTTGGCGTCTACAGCACAGCAAGACAGATTTTCCGTTAATTGGAGATCAAG ACAGCCTGTTTTAAGACACCAGAAAGCCAAGAAAAGAGGCTTTCCACAGTTCTGATGTTA ACTTTACAATAAATAGAAAGTGTCTTGATGTCAAGAGTTAGTTAGAATTCTGAACAACAG GGCAGATAATTCTGAAAATATTTTTTTTATGTAAATTGAGAGGAAAAACGATAACAGGGG ATGCCTTTTTCC