Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0812900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34558533:34559935:-1 gene:Os01g0812900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alphavirus core protein family. (Os01t0812900-01)
Sequence	ATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCACGGCGCCCACGCACCTC GACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCTCCTTCTCCCCGCTCTCC TCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCCCGTCTGGTCCGTCTGGG CCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCGGCGGCGGATCTGGCGAC GCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCTTCCTCGCCGGGTGGGCG GCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCATGGAGGAGCTCGTCGGC GTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACTTCGGGCTCAACGAGCTC GACTTCGTCTTCTCCACCCTCGTCGTCGGATCCATCCTCAACTTCGTCCTCATGTACCTC CTCGCGCCCACCGCCGGCGCCTCGGCCGCCGCGTCCGCCGCCGCGTCGGGGCTCCCCAGC CACATGTTCGAGGCCGGCGCCTACTCCTTGGGCTCCCGCGTCGCGACGCTGCTATCCAAG GGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCGGCACCGCGATCTCCAAC GGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGACCCCGAACAAGGCGCCG CCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGGTCAGCAGCAACCTGCGG TACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCGCGCCGCCGTCGGTGTTC AAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGGGTGGCATGTCCTTCGTG CTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGGCCGCCTCGGCGACTGCG GAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTGCCGCAGACGCCGTCGGC GCGGGAAGGGATGGAGAGGGTAAGTGA

Peptide Sequence

PEP ID	Os01t0812900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34558533:34559935:-1 gene:Os01g0812900 transcript:Os01t0812900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alphavirus core protein family. (Os01t0812900-01)
Sequence	MASMAFTAAKFLPATAPTHLDSSPRLSPPRAGSLSFSPLSSSSSALLLRLRSPSPSGPSG PGGRLPPPPRSYGGGGGSGDAADSGGSSGGILGIFLAGWAARVAADPQFPFKVLMEELVG VSACVLGDMASRPNFGLNELDFVFSTLVVGSILNFVLMYLLAPTAGASAAASAAASGLPS HMFEAGAYSLGSRVATLLSKGATFAAVGFAAGLAGTAISNGLISLRKRMDPAFETPNKAP PTLLNAATWAIHMGVSSNLRYQTLNGVEYLLANAAPPSVFKVSVVALRCINNVLGGMSFV LLARLTGSQKSDAPAASATAEEEKERLIAVGNDIAADAVGAGRDGEGK

Transcript Sequence

Transcript ID	Os01t0812900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34558533:34559935:-1 gene:Os01g0812900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to alphavirus core protein family. (Os01t0812900-01)
Sequence	ACTACCACTCCTGCACAGCACAGCCTGCACTACACCAACCAACCACCAAAACCCTTCTTC CCCCATCGAAAGCCCATCTCACTCTCCTCCCCGCCGCCGCCGCCAAGCCTGCGCGGCGCC CTCCCCTCCCGATCGCCATGGCCTCCATGGCGTTCACCGCCGCCAAGTTCCTCCCTGCCA CGGCGCCCACGCACCTCGACTCCTCCCCGCGCCTCTCCCCGCCCCGCGCCGGTAGCCTCT CCTTCTCCCCGCTCTCCTCGTCGTCGTCCGCCCTCCTCCTCCGCCTCCGATCCCCGTCCC CGTCTGGTCCGTCTGGGCCAGGTGGCAGGCTGCCCCCGCCGCCGCGCTCCTACGGCGGCG GCGGCGGATCTGGCGACGCCGCGGATTCCGGGGGCAGCAGCGGCGGCATCCTCGGCATCT TCCTCGCCGGGTGGGCGGCACGCGTCGCCGCGGATCCGCAGTTCCCGTTCAAGGTGCTCA TGGAGGAGCTCGTCGGCGTCAGCGCCTGCGTGCTCGGCGACATGGCGTCCCGCCCGAACT TCGGGCTCAACGAGCTCGACTTCGTCTTCTCCACCCTCGTCGTCGGATCCATCCTCAACT TCGTCCTCATGTACCTCCTCGCGCCCACCGCCGGCGCCTCGGCCGCCGCGTCCGCCGCCG CGTCGGGGCTCCCCAGCCACATGTTCGAGGCCGGCGCCTACTCCTTGGGCTCCCGCGTCG CGACGCTGCTATCCAAGGGCGCCACGTTCGCCGCCGTGGGGTTCGCCGCGGGGCTCGCCG GCACCGCGATCTCCAACGGCCTCATCTCGCTGCGGAAACGCATGGACCCGGCGTTCGAGA CCCCGAACAAGGCGCCGCCCACGCTGCTCAACGCCGCTACCTGGGCGATCCACATGGGGG TCAGCAGCAACCTGCGGTACCAGACGCTGAACGGCGTCGAGTACCTGCTCGCCAACGCCG CGCCGCCGTCGGTGTTCAAGGTGTCCGTCGTTGCTCTCCGGTGCATAAACAACGTGCTGG GTGGCATGTCCTTCGTGCTACTCGCGAGGTTAACCGGGTCGCAGAAGTCTGATGCGCCGG CCGCCTCGGCGACTGCGGAGGAGGAGAAGGAGAGGTTGATAGCCGTGGGCAATGACATTG CCGCAGACGCCGTCGGCGCGGGAAGGGATGGAGAGGGTAAGTGAGTGGATGCATAATGCA TATGCTTGCTTGCTTGCATCGCTCAAGCTTCGTTTGCGGCTTCTTGGACATGGGCCAAGA AAGCTCTGTAGATGATAAGCCGGTTGGCTTGGCAATAAGGAGTGAGGCTTGAAACAATTT GTTCAGTCCATCTTTGGTGTTCTTGGTTTAATCTGTCGACATGCTTAGTTGATCTTAGAA TAAAGCTTTACCTTTTTTCTGTT