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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0812800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:34550416:34552611:-1 gene:Os01g0812800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L30e domain containing protein. (Os01t0812800-01)
Sequence

ATGGCTCCCGTTAAGAAGACGAAGAAGAACGCGGAGGGGATCAACAACAAGCTGCAGCTG
GTGATGAAGAGCGGCAAGTACACCCTCGGCTACAAGACCGTCCTCAAGACCCTCCGCAAC
TCCAAAGGGAAGCTAGTTATCGTTGCAAACAACTGCCCTCCACTTAGGAAGTCTGAAATT
GAGTACTATGCTATGCTGGGAAAAGTTAGTGTGTATCACTTCAATGGAAACAATGTTGAT
CTTGGCACTGCCTGCGGCAAGTACTACCGAGTGTGCTGTCTCAGTGTCGTCGATCCTGGT
GACTCGGATATTACCAAGCAATTACCTGAGAGTCATTGA

Peptide Sequence

PEP ID

Os01t0812800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:34550416:34552611:-1 gene:Os01g0812800 transcript:Os01t0812800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L30e domain containing protein. (Os01t0812800-01)
Sequence

MAPVKKTKKNAEGINNKLQLVMKSGKYTLGYKTVLKTLRNSKGKLVIVANNCPPLRKSEI
EYYAMLGKVSVYHFNGNNVDLGTACGKYYRVCCLSVVDPGDSDITKQLPESH

Transcript Sequence

Transcript ID

Os01t0812800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34550416:34552611:-1 gene:Os01g0812800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Ribosomal protein L30e domain containing protein. (Os01t0812800-01)
Sequence

CCGCCGCCGCCACCGACGCCGTCGCCGACGATCCCATGGCTCCCGTTAAGAAGACGAAGA
AGAACGCGGAGGGGATCAACAACAAGCTGCAGCTGGTGATGAAGAGCGGCAAGTACACCC
TCGGCTACAAGACCGTCCTCAAGACCCTCCGCAACTCCAAAGGGAAGCTAGTTATCGTTG
CAAACAACTGCCCTCCACTTAGGAAGTCTGAAATTGAGTACTATGCTATGCTGGGAAAAG
TTAGTGTGTATCACTTCAATGGAAACAATGTTGATCTTGGCACTGCCTGCGGCAAGTACT
ACCGAGTGTGCTGTCTCAGTGTCGTCGATCCTGGTGACTCGGATATTACCAAGCAATTAC
CTGAGAGTCATTGATGTGCATGCATTGGCCTTGTGACCGATCTTATCTTCACTTTTTGCT
CACATGAAAAAGATATATATCTTCATACGGTGTTCTTGTGAAGTTGCGATACATTGATGA
ACCAAACCTGGCACACTTCAATAGCATCGCCTAGTTTTGCTCTGCTAAGCATCTGTCAAC
GGTAAAGGTAGGAGTGAAATGTATGTAGGATTTGGAGGTAATGGGAAATAAATGGTGCAA
TCTGTTTTACTTTC