Plant GARDEN
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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0812050-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:34515277:34520432:1 gene:Os01g0812050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0812050-00)
Sequence

ATGTTTGTGCTGGAGGCTGAAAGAGTGCATGCCATGGCCCTTGATACAAAACAAGTTGCG
CGATGTTTGAAGAAAGTTTTGAAGTCCTCCATTAAAGATGGCTATAGATGTGTTTCTGAA
CATCCAATCCTTTTGACATTGGGTGTTTTGCTCTATTTATTGTATAGATCTTCACCAGGG
TTATTTGCTTTCCTACTTTCTTCTTCTCCTGTAATTATGTGTACTACTCTTCTTCTTGGA
ATCCTACTGAGTTATGGGGAAACAAACCTGCCTGAGGCTGATGAAGATAACAAGATCACT
CCAGAGATTTCATCCTTAAAGGTTGGAAATCCTTCCAGTGATTTTCACTTTGAAGCGAGC
CAGAGATTACCAGTGCCTGAATTGAGGGAAAATACAACTGGCTTCAAAGAGAGGGAAACT
AAACAGACGGTTTTTATTAGAGAGAGGGCTAGTGAGCATATTGAGCTGGAAGATAATGTC
CCCCTTCTGAGAAGGGTTGAGCATGAATACGATAGATTTGATCGGCATGAAATACCTGCA
GCGTTAACGCCATTTCCCTCTATGGTCAATTTTCATCAAGGTTCTAGAGTTGGAAACGAC
TTGAGCTCTAATCAGGACATCAACTCCAAAGGTTTGTTGTCCATTAAGGATAAGGCTGAT
GGGCACACTAGCTTCTTTGAAGGTGTTCGGAGTGGTCTGGATGAGAAAGAGGCACCCTTT
GGCATTTTTTCGACCAGTAAGAATGTTAATGGACGTGGTGAATTGGAGGAAAATTTGAAT
CAAGAAACAGTATTTACAGATTCAACAGCTAGCAGAGTGAGAGATATTTCTGAAGAGAAA
CCAACGGAAGGGGAAGCTGGAACTAGCAAATCAGCTTGTGCCATTTCCACGCATCAGAGT
AAAACACTTGATGAACTTAGGATTAATACTAGCAAGGGTTTTGAGGACAATCTACTCGAT
TCCTCTCTTGGTTCACCATGGGCAAGAGTTGGTAGTGAGGACGGAGTTGGTAGTGATGAT
GGTTCATCTGGTTTTGACTCTGATCAGGCTGAGAGTTCTTCTCCTGATGCTTCCATGACT
GACATTGCACCTATTCTTGATGAGATTGACCCGCTCTTGGGTGCAAGCTCTACTCATCCT
GATACAATTCCAAAGGATGATTCGGACACTGATTCACATGTTTCCTCACAGGATCATCAA
ACTGATGATGATAGTAATGATGAAACTGACAATAATGATGCTAAAGAGAATGGTGAGGAA
AAGAATAAAGAACAAGGAAAGGAAGCTGCATTTATTTGGACAGCAGATGATGAAAAAAAT
CTGATGGATCTTGGATATTCTGAGATGGAAAGAAACCGCAGGTTGGAGCTTTTGATGGCC
AGACGAAGATCCAGGAAGAACATAAGGTTTGAAATCGACAATGACTTGATAGGTATTGAT
AATAATGATGGTGGGAGGGGTGTTGACGACTTGTCTCGCTTCCATGTACAAGTACCACAT
ATTTCAGTTCCAAGGAGGAATCCGTTTGATCTTCCTTATGATTCAGAAGAAGCGGCAATT
CCTGGCTCAGCACCCTCAGTTCTGCATACAAGGAAAAACCCATTCGATCTTCCTCTTGAT
CAGTCCAATGATGGTGATGTTTCTGCAGATAATAATGTAAATCCTGGAGAATTAGTGAAA
GCTTCTCATCGTGACATGTTCTTCCGAAGGCACGATAGCTTCAACATTGGAAGGACAGAT
GCTACCCTGGAGAGATTTTCTAGATTCAAGCCATATTTTGTCCCCGAGACAGTGGAAGGG
AGCTTAAGTAATTTCCAAAGACAGTTTAGTGATAAAAGTGAGTCTAAATTGAGTTCTGTT
ACTGAATCTGATTTGGCCTCTTCAGTTGCCGATCAGGAGGACCACAAGGACCTCGATGAA
AAAGATTTGCCCAATGAGCATGGGTCTCCAGCTCTGCAGAGACAGGATAGCGACCTTGCG
GATGTTGGAAGTGAATGCTCGGATGGCATCAACTCCGTGGATGTTGAATTAGACAACAGT
GACATTGATGATCGTGAGATTGCTCTACAACACTTTGTCTTTGAAAGATCACAGGAAAGA
GAAGCATATCTTTCCTCAACAAAAGGAAAGGGTCCTGAAGATGATTACCTGCTCAGTTCA
GTTGGGAACTCCAAGACACTTCATCCAGTAGCTGACCTGTTTAGCTGGGAAGATGGAAAT
GGTGAAAGCAGCCTTGGTGTTAACTCTTCCCATAACATGTCAGTTGAATTCTCGGACTGG
GTTTCATCCCCCAAGCCAATTGCAGAGCATGATTCAGGACCAGAGAACCTTCAGGAGTTT
CTTAATACTGAAGTTGCATCAAGTTCAAAGACAATTGTTCTAGGCGCAAGAAATCCAGCT
GAAAATAATGGAAATGTTGATTCCATATCCTATTCAAACAATGAAATGCCTTCAGATAAC
TTGGGTCATGGGTCCATGGAGTTCCCATCTGAATTTTGTAATGAATCACTGCCAGTAATA
TCTAGGGACTTGCACCCTATCCCTGAAGAGAGGGTTGTCGAGAACTTCAATGTGCAAGAA
AAGCATGAAGCAGTAATATTTACCGATTCAGATGCTGCCTTGACTGGGTTTCATGTAATT
GAGGAGCACTTTGAAGTTGGATGTGATGTAAGCCCGAGTTCTGAAGTTGTTCCGTCATGC
CTTCAAGCAAGTGATTCCATCCAATCTCGATTAGTTGAGAATAAAGAGGTATCAAATCCA
TTCATTTCCATCGCTTCTGAAACCAACAAGGTGGATATGATTGATTTGAAGGAAGAAACA
GCTGCAGGATATCCACTTGATTCTGATGATGATGCTGATAAAATCTATCCTGAGCCCATG
GAGGACAATGTAATTGATGAAAGTTTCCTATCAGAACTGGATGCGGTAGGAGATTTCCGG
GTAGAAGCAACAAGATCGGACCAGCAGATGCCTGATGTTGACTCCCATATTGATAATAAC
ACTTCCAATGGTGTTGCAGAGAGCTCCTTGATTAGCCCTCAGATTTCAAGTAACATATTT
TCAAATATGAAATATGCCAGTATGCTCGAACATGAGGAGAATTCTCCATTGGTTGATGAC
CTAAATGGCACCGGTCCTGAATTTGGTTGGTCATTAGGAGCATCTTATGATGACCCTGAG
CAGACTGTCTACAATCCGAGGCGACGGATTCTTGGAGCAAGTCGTTTTGAAGAAACTAAC
ACAGAGATGAAGCCACTATTTGATGAGACAGAAGCATCTTTTGTCAATGCACCAATAGAA
GCAAACTTGGTAGTTGGACCAAGTAAAGTGGATGTTGCTAATGAGTCTGAGTTAACTAAA
ACTGATACAAACATGATCGTTCTTGATGCCAATTCTCTGGAGGATATAGAGACGGCCTTT
AAACAAGCAAGCAATGGCGTTGTTGAGTCCACCGTGGACAATGAAACCCCACAGGTTTCT
GGTGTTGATATTGACCCAGAATCCATAGAGAGTTCTGAACAATTGGATGTCATTGATGCA
AAATCCGTCGACGACATATATGCTGCTTTGAAGGAGCACACAACTGCTGCTATGAACAGT
TCCTTCGAAGAAAACGAAGACAAGCATGGATGCGGTGATACTGTAAAATTCACCATGCAT
GATGAGCTTCCAGAAGGAACACATATTGAAGGTAACACAGTTGGAGATGGTAAAGAGCCT
GAACCAATGGGGATTACAAGCAGCATGGATGTCATTGATGCAAAATCCATCGATGACATA
TATGCTGCTTTGAAGAAGCAGTCAAGTGCTGCTGCGAATAGTTCCTTCGAACAAAACGAA
GGCAAGAACGGATGTGGTGATACTGTAACATTCACCACGCACGATGAGCTTCCGGAAGGA
ACACACATTGAAGATAGGGATAATACAGTTGAAGATGGTAAAGAGCCTGAACCGATTGGG
ACTACAAGCAGCATGGACACTATTGAGGTGAAAACAATTGATGACATAGACGCAGTGTTC
AAGAAGCTCTCTGATGGCGGTACCAAGAGTGCTGCCCAGGCAGTGGATTGCGAGAATACT
TGTGAAGCAAGTGATGAAAGTGAACAGCACTGA

Peptide Sequence

PEP ID

Os01t0812050-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:34515277:34520432:1 gene:Os01g0812050 transcript:Os01t0812050-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0812050-00)
Sequence

MFVLEAERVHAMALDTKQVARCLKKVLKSSIKDGYRCVSEHPILLTLGVLLYLLYRSSPG
LFAFLLSSSPVIMCTTLLLGILLSYGETNLPEADEDNKITPEISSLKVGNPSSDFHFEAS
QRLPVPELRENTTGFKERETKQTVFIRERASEHIELEDNVPLLRRVEHEYDRFDRHEIPA
ALTPFPSMVNFHQGSRVGNDLSSNQDINSKGLLSIKDKADGHTSFFEGVRSGLDEKEAPF
GIFSTSKNVNGRGELEENLNQETVFTDSTASRVRDISEEKPTEGEAGTSKSACAISTHQS
KTLDELRINTSKGFEDNLLDSSLGSPWARVGSEDGVGSDDGSSGFDSDQAESSSPDASMT
DIAPILDEIDPLLGASSTHPDTIPKDDSDTDSHVSSQDHQTDDDSNDETDNNDAKENGEE
KNKEQGKEAAFIWTADDEKNLMDLGYSEMERNRRLELLMARRRSRKNIRFEIDNDLIGID
NNDGGRGVDDLSRFHVQVPHISVPRRNPFDLPYDSEEAAIPGSAPSVLHTRKNPFDLPLD
QSNDGDVSADNNVNPGELVKASHRDMFFRRHDSFNIGRTDATLERFSRFKPYFVPETVEG
SLSNFQRQFSDKSESKLSSVTESDLASSVADQEDHKDLDEKDLPNEHGSPALQRQDSDLA
DVGSECSDGINSVDVELDNSDIDDREIALQHFVFERSQEREAYLSSTKGKGPEDDYLLSS
VGNSKTLHPVADLFSWEDGNGESSLGVNSSHNMSVEFSDWVSSPKPIAEHDSGPENLQEF
LNTEVASSSKTIVLGARNPAENNGNVDSISYSNNEMPSDNLGHGSMEFPSEFCNESLPVI
SRDLHPIPEERVVENFNVQEKHEAVIFTDSDAALTGFHVIEEHFEVGCDVSPSSEVVPSC
LQASDSIQSRLVENKEVSNPFISIASETNKVDMIDLKEETAAGYPLDSDDDADKIYPEPM
EDNVIDESFLSELDAVGDFRVEATRSDQQMPDVDSHIDNNTSNGVAESSLISPQISSNIF
SNMKYASMLEHEENSPLVDDLNGTGPEFGWSLGASYDDPEQTVYNPRRRILGASRFEETN
TEMKPLFDETEASFVNAPIEANLVVGPSKVDVANESELTKTDTNMIVLDANSLEDIETAF
KQASNGVVESTVDNETPQVSGVDIDPESIESSEQLDVIDAKSVDDIYAALKEHTTAAMNS
SFEENEDKHGCGDTVKFTMHDELPEGTHIEGNTVGDGKEPEPMGITSSMDVIDAKSIDDI
YAALKKQSSAAANSSFEQNEGKNGCGDTVTFTTHDELPEGTHIEDRDNTVEDGKEPEPIG
TTSSMDTIEVKTIDDIDAVFKKLSDGGTKSAAQAVDCENTCEASDESEQH

Transcript Sequence

Transcript ID

Os01t0812050-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34515277:34520432:1 gene:Os01g0812050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0812050-00)
Sequence

TGATTTGACCCCGTGGGGGACGAGGCGAGGCGAGGCCTTCTTGCTCTGCCTTTCTTTTTC
TCCTCCTCCTCGCCTGATCAGCCAAGATTTTCGGCGGTTTTGTTTCTTCTGCTCCTTGGA
GCTTTCCCCGATCTCGCTTGCTGGTGCTGGTGCTGCTGCCTGACGGCGAAGGTATGTTTG
TGCTGGAGGCTGAAAGAGTGCATGCCATGGCCCTTGATACAAAACAAGTTGCGCGATGTT
TGAAGAAAGTTTTGAAGTCCTCCATTAAAGATGGCTATAGATGTGTTTCTGAACATCCAA
TCCTTTTGACATTGGGTGTTTTGCTCTATTTATTGTATAGATCTTCACCAGGGTTATTTG
CTTTCCTACTTTCTTCTTCTCCTGTAATTATGTGTACTACTCTTCTTCTTGGAATCCTAC
TGAGTTATGGGGAAACAAACCTGCCTGAGGCTGATGAAGATAACAAGATCACTCCAGAGA
TTTCATCCTTAAAGGTTGGAAATCCTTCCAGTGATTTTCACTTTGAAGCGAGCCAGAGAT
TACCAGTGCCTGAATTGAGGGAAAATACAACTGGCTTCAAAGAGAGGGAAACTAAACAGA
CGGTTTTTATTAGAGAGAGGGCTAGTGAGCATATTGAGCTGGAAGATAATGTCCCCCTTC
TGAGAAGGGTTGAGCATGAATACGATAGATTTGATCGGCATGAAATACCTGCAGCGTTAA
CGCCATTTCCCTCTATGGTCAATTTTCATCAAGGTTCTAGAGTTGGAAACGACTTGAGCT
CTAATCAGGACATCAACTCCAAAGGTTTGTTGTCCATTAAGGATAAGGCTGATGGGCACA
CTAGCTTCTTTGAAGGTGTTCGGAGTGGTCTGGATGAGAAAGAGGCACCCTTTGGCATTT
TTTCGACCAGTAAGAATGTTAATGGACGTGGTGAATTGGAGGAAAATTTGAATCAAGAAA
CAGTATTTACAGATTCAACAGCTAGCAGAGTGAGAGATATTTCTGAAGAGAAACCAACGG
AAGGGGAAGCTGGAACTAGCAAATCAGCTTGTGCCATTTCCACGCATCAGAGTAAAACAC
TTGATGAACTTAGGATTAATACTAGCAAGGGTTTTGAGGACAATCTACTCGATTCCTCTC
TTGGTTCACCATGGGCAAGAGTTGGTAGTGAGGACGGAGTTGGTAGTGATGATGGTTCAT
CTGGTTTTGACTCTGATCAGGCTGAGAGTTCTTCTCCTGATGCTTCCATGACTGACATTG
CACCTATTCTTGATGAGATTGACCCGCTCTTGGGTGCAAGCTCTACTCATCCTGATACAA
TTCCAAAGGATGATTCGGACACTGATTCACATGTTTCCTCACAGGATCATCAAACTGATG
ATGATAGTAATGATGAAACTGACAATAATGATGCTAAAGAGAATGGTGAGGAAAAGAATA
AAGAACAAGGAAAGGAAGCTGCATTTATTTGGACAGCAGATGATGAAAAAAATCTGATGG
ATCTTGGATATTCTGAGATGGAAAGAAACCGCAGGTTGGAGCTTTTGATGGCCAGACGAA
GATCCAGGAAGAACATAAGGTTTGAAATCGACAATGACTTGATAGGTATTGATAATAATG
ATGGTGGGAGGGGTGTTGACGACTTGTCTCGCTTCCATGTACAAGTACCACATATTTCAG
TTCCAAGGAGGAATCCGTTTGATCTTCCTTATGATTCAGAAGAAGCGGCAATTCCTGGCT
CAGCACCCTCAGTTCTGCATACAAGGAAAAACCCATTCGATCTTCCTCTTGATCAGTCCA
ATGATGGTGATGTTTCTGCAGATAATAATGTAAATCCTGGAGAATTAGTGAAAGCTTCTC
ATCGTGACATGTTCTTCCGAAGGCACGATAGCTTCAACATTGGAAGGACAGATGCTACCC
TGGAGAGATTTTCTAGATTCAAGCCATATTTTGTCCCCGAGACAGTGGAAGGGAGCTTAA
GTAATTTCCAAAGACAGTTTAGTGATAAAAGTGAGTCTAAATTGAGTTCTGTTACTGAAT
CTGATTTGGCCTCTTCAGTTGCCGATCAGGAGGACCACAAGGACCTCGATGAAAAAGATT
TGCCCAATGAGCATGGGTCTCCAGCTCTGCAGAGACAGGATAGCGACCTTGCGGATGTTG
GAAGTGAATGCTCGGATGGCATCAACTCCGTGGATGTTGAATTAGACAACAGTGACATTG
ATGATCGTGAGATTGCTCTACAACACTTTGTCTTTGAAAGATCACAGGAAAGAGAAGCAT
ATCTTTCCTCAACAAAAGGAAAGGGTCCTGAAGATGATTACCTGCTCAGTTCAGTTGGGA
ACTCCAAGACACTTCATCCAGTAGCTGACCTGTTTAGCTGGGAAGATGGAAATGGTGAAA
GCAGCCTTGGTGTTAACTCTTCCCATAACATGTCAGTTGAATTCTCGGACTGGGTTTCAT
CCCCCAAGCCAATTGCAGAGCATGATTCAGGACCAGAGAACCTTCAGGAGTTTCTTAATA
CTGAAGTTGCATCAAGTTCAAAGACAATTGTTCTAGGCGCAAGAAATCCAGCTGAAAATA
ATGGAAATGTTGATTCCATATCCTATTCAAACAATGAAATGCCTTCAGATAACTTGGGTC
ATGGGTCCATGGAGTTCCCATCTGAATTTTGTAATGAATCACTGCCAGTAATATCTAGGG
ACTTGCACCCTATCCCTGAAGAGAGGGTTGTCGAGAACTTCAATGTGCAAGAAAAGCATG
AAGCAGTAATATTTACCGATTCAGATGCTGCCTTGACTGGGTTTCATGTAATTGAGGAGC
ACTTTGAAGTTGGATGTGATGTAAGCCCGAGTTCTGAAGTTGTTCCGTCATGCCTTCAAG
CAAGTGATTCCATCCAATCTCGATTAGTTGAGAATAAAGAGGTATCAAATCCATTCATTT
CCATCGCTTCTGAAACCAACAAGGTGGATATGATTGATTTGAAGGAAGAAACAGCTGCAG
GATATCCACTTGATTCTGATGATGATGCTGATAAAATCTATCCTGAGCCCATGGAGGACA
ATGTAATTGATGAAAGTTTCCTATCAGAACTGGATGCGGTAGGAGATTTCCGGGTAGAAG
CAACAAGATCGGACCAGCAGATGCCTGATGTTGACTCCCATATTGATAATAACACTTCCA
ATGGTGTTGCAGAGAGCTCCTTGATTAGCCCTCAGATTTCAAGTAACATATTTTCAAATA
TGAAATATGCCAGTATGCTCGAACATGAGGAGAATTCTCCATTGGTTGATGACCTAAATG
GCACCGGTCCTGAATTTGGTTGGTCATTAGGAGCATCTTATGATGACCCTGAGCAGACTG
TCTACAATCCGAGGCGACGGATTCTTGGAGCAAGTCGTTTTGAAGAAACTAACACAGAGA
TGAAGCCACTATTTGATGAGACAGAAGCATCTTTTGTCAATGCACCAATAGAAGCAAACT
TGGTAGTTGGACCAAGTAAAGTGGATGTTGCTAATGAGTCTGAGTTAACTAAAACTGATA
CAAACATGATCGTTCTTGATGCCAATTCTCTGGAGGATATAGAGACGGCCTTTAAACAAG
CAAGCAATGGCGTTGTTGAGTCCACCGTGGACAATGAAACCCCACAGGTTTCTGGTGTTG
ATATTGACCCAGAATCCATAGAGAGTTCTGAACAATTGGATGTCATTGATGCAAAATCCG
TCGACGACATATATGCTGCTTTGAAGGAGCACACAACTGCTGCTATGAACAGTTCCTTCG
AAGAAAACGAAGACAAGCATGGATGCGGTGATACTGTAAAATTCACCATGCATGATGAGC
TTCCAGAAGGAACACATATTGAAGGTAACACAGTTGGAGATGGTAAAGAGCCTGAACCAA
TGGGGATTACAAGCAGCATGGATGTCATTGATGCAAAATCCATCGATGACATATATGCTG
CTTTGAAGAAGCAGTCAAGTGCTGCTGCGAATAGTTCCTTCGAACAAAACGAAGGCAAGA
ACGGATGTGGTGATACTGTAACATTCACCACGCACGATGAGCTTCCGGAAGGAACACACA
TTGAAGATAGGGATAATACAGTTGAAGATGGTAAAGAGCCTGAACCGATTGGGACTACAA
GCAGCATGGACACTATTGAGGTGAAAACAATTGATGACATAGACGCAGTGTTCAAGAAGC
TCTCTGATGGCGGTACCAAGAGTGCTGCCCAGGCAGTGGATTGCGAGAATACTTGTGAAG
CAAGTGATGAAAGTGAACAGCACTGA