Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0810200-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:34417119:34420330:1 gene:Os01g0810200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os01t0810200-01)
Sequence

ATGGCGAACCCGAGGAGAGCCATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCC
GCCGCCCCCGCCGCCGCGCCGTCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAG
CGGCCGGCGTCGTTCCCATTCCTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTC
CGCTTCCACCACCCGTCCCCTTCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCC
CAGGCCAACCTCGTCCGTTACCCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGG
CGCGGGTGGCTACTTGACCCCGTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCA
CTGGTTTGTTTATCACTACACGTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCAT
CGCCACCATACATGCAATGAGACATTTGTCATCTGGGGTGCAAAGACAAAATTCCGGTTA
GAAAATGCTGATGTAAATGATAGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTG
GCCATTGTTGCAAGCGCAAGATCAACTGCACATGCCTTGATAAATATGGATGTGCGACCA
ACCTTCTTCTTGGGATGTCAGGACACGCCAATAAATCCCAACAGCTCGAATACTGACTAC
AAGGTCTGGAAAGACATCTGA

Peptide Sequence

PEP ID

Os01t0810200-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:34417119:34420330:1 gene:Os01g0810200 transcript:Os01t0810200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os01t0810200-01)
Sequence

MANPRRAIALQIHTQTTPLAAAPAAAPSPSLPSSLVHFLKRPASFPFLLSLFVLLTWISL
RFHHPSPSASVLRAPVVHDPQANLVRYPAALYPTPIAADGRGWLLDPVAAARDAGLPGGA
LVCLSLHVGQIQPGGLRGNHRHHTCNETFVIWGAKTKFRLENADVNDRGYGEAMIAADEV
AIVASARSTAHALINMDVRPTFFLGCQDTPINPNSSNTDYKVWKDI

Transcript Sequence

Transcript ID

Os01t0810200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34417119:34420330:1 gene:Os01g0810200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cupin, RmlC-type domain containing protein. (Os01t0810200-01)
Sequence

CGGGCCCGTCTCGCCACCAACAGCTCGCCGCGGCGGCGGCCGAGTCCGGGCAGCGCCACC
ACCACCAGCAGCAAGCAGCAGCAGCTCGCCGCCCACCCATCCATGGCGAACCCGAGGAGA
GCCATCGCGCTGCAAATCCACACGCAGACGACGCCCCTCGCCGCCGCCCCCGCCGCCGCG
CCGTCCCCCTCGCTGCCGTCGTCGCTGGTCCACTTCCTGAAGCGGCCGGCGTCGTTCCCA
TTCCTGCTCTCCCTCTTCGTGCTCCTCACCTGGATCTCGCTCCGCTTCCACCACCCGTCC
CCTTCGGCTTCCGTCCTCAGGGCCCCCGTCGTGCACGACCCCCAGGCCAACCTCGTCCGT
TACCCCGCCGCGCTGTACCCCACCCCCATCGCCGCCGACGGGCGCGGGTGGCTACTTGAC
CCCGTCGCCGCTGCTCGAGACGCCGGCTTACCAGGAGGAGCACTGGTTTGTTTATCACTA
CACGTGGGACAGATCCAGCCAGGTGGTTTACGTGGCAATCATCGCCACCATACATGCAAT
GAGACATTTGTCATCTGGGGTGCAAAGACAAAATTCCGGTTAGAAAATGCTGATGTAAAT
GATAGAGGATATGGGGAAGCCATGATTGCCGCTGATGAGGTGGCCATTGTTGCAAGCGCA
AGATCAACTGCACATGCCTTGATAAATATGGATGTGCGACCAACCTTCTTCTTGGGATGT
CAGGACACGCCAATAAATCCCAACAGCTCGAATACTGACTACAAGGTCTGGAAAGACATC
TGATGATCACGTTGCTTCTGTCCTTAATGGTAAGCCATGAGAAACCATAATAGCATGAAG
CCTTCAGAAACCATCTTGTTTCCATTGGCAATGATTTCAAAGCAGATGTGTATATAGTTA
CGGCTTGTGACTTATGAGGGGACTTCCAGTTACGAAGCTATTCTTTTGTTTGTCATGCCA
AATTTCTTCTGTAGTAGGTTAACCTTTTTCGTTTGGAGGTGTAATGCATTTTCAGGGTTA
TTACTTGATGATATGTTCCCCTGTTCTTTGAATGATGTGTTGTCGATAAATTAATTGTTG
ATATGCAGGTAAGGTGTGACATGAACTTTTTAATGATCACATACCGCAAGATATATCTGA
TTGCTTAACGTGAATTCTCATATGGTGAGGTAGTGTTTGGCACGCACATCAGCGCATTTC
TTGTGGTGTAGCATGGATCACTAGTGTGCTTTCGCGTCTGTCTGACTTGCAGACATCTGC
TTTCTTTTGGTTTTCTATCAGCGTCGTCTATATTTGCTAGTTTGATTCATGTCCACAGAT
TTTTATTTTTAATGACACGTGTGGATGAGTGTGGATATTCGTCCACACAGTATTGAAAAC
G