Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0810000-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:34409226:34412476:-1 gene:Os01g0810000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Utp11 family protein. (Os01t0810000-01);Utp11 family protein. (Os01t0810000-02)
Sequence

ATGTCTTCGCTGCGGAACGCGATCCAGCGGCGCGCTCACAAGGAGCGCGCCCAGCCGGAG
TCGAGGAAGAAGTTCGGGCTTCTGGAGAAGCACAAGGACTACATCGTTCGGGCGAAGGCT
TTCCACCAGAAGGAGGAAACCATCAGGAAATTGAAGGAGAAGGCATCATTTAGAAACCCT
GATGAGTTCTATTTTAAGATGATCAACAGCAAGACTGTTGATGGAATTCATAGGCCTAAG
CCTGAAGCAAACAAGTATACTGAAGATGAACTCATGCTGCTAAAAACTAAAGATATGGGA
TACATCCTTCAGGGTATTCAGAGTGAAAAGAAGAAAATTGAAAAATTAAGCTCCATGCTT
CATGAACTAGACAACAAGCGACCAAACAAGCATGTTTACTTTGCTGAAGACAGAGAAGAG
GTCAAAGAAATACAATCTAGAATAGAACAAAAGAGCAGTTCACTTGGTTTGGACAACATC
CCTTCCCGTATAAAGAGGAAAACTGCTTCGTCCTATAGGGAGTTAGAGGAGAGGAAACAG
AGGGTTCAAAAGCTTGAGAAACTGTATGCAGACATGGCCTTGCAGAAAGAGTTGAAGAAA
CCTGGACGGAAAAGAAAACTCCGTGAGGATGAGATTGAGAATCAAACATCCCGGCCTGTT
TATAAGTGGCGAGCACAACGGAAGCGATGA

Peptide Sequence

PEP ID

Os01t0810000-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:34409226:34412476:-1 gene:Os01g0810000 transcript:Os01t0810000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Utp11 family protein. (Os01t0810000-01);Utp11 family protein. (Os01t0810000-02)
Sequence

MSSLRNAIQRRAHKERAQPESRKKFGLLEKHKDYIVRAKAFHQKEETIRKLKEKASFRNP
DEFYFKMINSKTVDGIHRPKPEANKYTEDELMLLKTKDMGYILQGIQSEKKKIEKLSSML
HELDNKRPNKHVYFAEDREEVKEIQSRIEQKSSSLGLDNIPSRIKRKTASSYRELEERKQ
RVQKLEKLYADMALQKELKKPGRKRKLREDEIENQTSRPVYKWRAQRKR

Transcript Sequence

Transcript ID

Os01t0810000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34409226:34412476:-1 gene:Os01g0810000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Utp11 family protein. (Os01t0810000-01);Utp11 family protein. (Os01t0810000-02)
Sequence

GCCTGATCCATCGGAGGAGGACGACGAGGAGGAGGTTTGCGAGGCAGCGGCAGGGAGAGG
AAGATGTCTTCGCTGCGGAACGCGATCCAGCGGCGCGCTCACAAGGAGCGCGCCCAGCCG
GAGTCGAGGAAGAAGTTCGGGCTTCTGGAGAAGCACAAGGACTACATCGTTCGGGCGAAG
GCTTTCCACCAGAAGGAGGAAACCATCAGGAAATTGAAGGAGAAGGCATCATTTAGAAAC
CCTGATGAGTTCTATTTTAAGATGATCAACAGCAAGACTGTTGATGGAATTCATAGGCCT
AAGCCTGAAGCAAACAAGTATACTGAAGATGAACTCATGCTGCTAAAAACTAAAGATATG
GGATACATCCTTCAGGGTATTCAGAGTGAAAAGAAGAAAATTGAAAAATTAAGCTCCATG
CTTCATGAACTAGACAACAAGCGACCAAACAAGCATGTTTACTTTGCTGAAGACAGAGAA
GAGGTCAAAGAAATACAATCTAGAATAGAACAAAAGAGCAGTTCACTTGGTTTGGACAAC
ATCCCTTCCCGTATAAAGAGGAAAACTGCTTCGTCCTATAGGGAGTTAGAGGAGAGGAAA
CAGAGGGTTCAAAAGCTTGAGAAACTGTATGCAGACATGGCCTTGCAGAAAGAGTTGAAG
AAACCTGGACGGAAAAGAAAACTCCGTGAGGATGAGATTGAGAATCAAACATCCCGGCCT
GTTTATAAGTGGCGAGCACAACGGAAGCGATGATGTGAATGGCTTACAATGGAATCATTG
AGAATATATGGAGTAACCAGTAGATCCTAAAGCAAACGGAGACTATTGTTTATTTTCTTG
AATTCTAATGCATTTACATGTAGCAGTGCCCCTCCACAACCGTCTCTCTTCATAGCCTTC
ACTTGATTGTATTTGTGGATCCATGTTGGATACCACTTTCTGCTACCTGCTACTGATGTG
ATGTACCTCTGCTTTTTACAAAATGTTGGGTAACTACATCAACAATTGAGAACCTAAACG
GTCCGAATCTTCACGCATCGTCCGTAATCAACATTCCAAGGTTAGCAAGCACAGTGCCAC
CAGAATTAGGGCGTGTTCACTTTGCCGGAAAAAAAACATACCATTTGATGGTAGAGCCAA
ATATTAGTAATGCCATTCTTTGGTAAAGTCAAAATATCAATGTGTCATTGGCTTTGATAC
CTTACTAAATTTTGGTGTAATTTTTGTGAGTGGAAGGTTCCGGAATTACCAAATTACCTT
ACTAAATTTTGGTGTAATTTTTGTGAGTGCAATCCTATTTGTTTGTTACCCTACCAACAA
AAATTTGACAATACCAAAATTTAGTAAGGTTTATTCTGGTAGTGGAGTGAACAAGCCACT
CTTTAGTGTATGAAGTATTTGATATATTCTCCAGAAAAAAAGGGGTTATGCACAGC