Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0809900-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:34406376:34409200:1 gene:Os01g0809900 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD dependent oxidoreductase domain containing protein. (Os01t0809900-01)
Sequence

ATGCTCCCGCTGCGGCGCTTTGCGGGGGCCTGCCGCCGGCGAGGCCTCGCCGGGATCGCC
CCCGGAGCACCCCGGGAGGCGGCGGACGCGGTGGTGGTGGGCGCCGGCGTGGTCGGGCTC
GCGGTGGCGCGCGCGCTGGCCATGGCCGGCCGCGAGGTGGTGGTGGTCGAGGCCGCCCCC
AGCTTCGGCACCGGCACCAGCTCCCGCAACAGCGAGGTCATCCACGCCGGCATCTACTAC
CCTCCCGGCAGCCTAAAGGCTAGTCTTTGTGTAAGAGGAAGGGAAATGCTCTACAAGTAC
TGTGCAGAACGAGAAATTCCCCATAAACAGCTCGGTAAACTCATCGTTGCTACTGGTGTT
GCAGAGACGGCAAAATTGGACATGCTTCTCAAGAATGCTAAAGAAAATGGGGTGGATGAT
CTTCAGATGATGGAGGGTTCTGAAGCTATGGAGATGGAACCTGAACTTCGCTGTCTTAAG
GCTTTACTGTCACCTCGTACTGGGATTGTTGACTCTCATTCATTCATGCTCTCCCTTTTG
GCTGATGCTGAGAATTTAGGAACAGCCATATCTTACAACACAACGGTTACAAATGGATAT
ATTGGAGATGAAGGCCTCGAGCTTCATATTTCTGAAAGCAAAGCACTGGAGAATCATTCT
GTGGGCTCTCCTGTGTCCCCACAACTCATTTTGTTTCCAAAACTTCTGATAAATTCAGCA
GGTTTGAGTGCGGCTCCACTTGCTAAAAGATTCCATGGCCTTAACCAAGTATTTGTGCCC
CCTGCTTATTATGCGCGTGGATGTTACTTCACCCTTTCTCAAACCAAGAGCCCTTTCAGC
CACTTGATCTACCCTCTACCAGAGGATGGTGGCATAGGGGTACATGTCACGCTAGATTTG
AATGGTGTTGTTAGATTTGGCCCAGATGTTGAGTGGATAGATGGTGGTAAGGATGTCACG
TCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCCTACCAGATGTTCTAAATTTTAT
CCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGATTCTTTGGAACCCAGTTATTCT
GGGATACGACCAAAGCTTTCTGGCCCGGGGCAGCCTCCTTCAGATTTTGTTATTCAGGGG
GAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTTTGGAATAGAATCCCCTGGTCTG
ACGTCAAGTTTGGCTATTGCTGAATACATTGTTTCAAGGTATTTGAGATGA

Peptide Sequence

PEP ID

Os01t0809900-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:34406376:34409200:1 gene:Os01g0809900 transcript:Os01t0809900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD dependent oxidoreductase domain containing protein. (Os01t0809900-01)
Sequence

MLPLRRFAGACRRRGLAGIAPGAPREAADAVVVGAGVVGLAVARALAMAGREVVVVEAAP
SFGTGTSSRNSEVIHAGIYYPPGSLKASLCVRGREMLYKYCAEREIPHKQLGKLIVATGV
AETAKLDMLLKNAKENGVDDLQMMEGSEAMEMEPELRCLKALLSPRTGIVDSHSFMLSLL
ADAENLGTAISYNTTVTNGYIGDEGLELHISESKALENHSVGSPVSPQLILFPKLLINSA
GLSAAPLAKRFHGLNQVFVPPAYYARGCYFTLSQTKSPFSHLIYPLPEDGGIGVHVTLDL
NGVVRFGPDVEWIDGGKDVTSCFLSRFDYSVNPTRCSKFYPVIRKYFPNLKDDSLEPSYS
GIRPKLSGPGQPPSDFVIQGEDIHGVPGLVNLFGIESPGLTSSLAIAEYIVSRYLR

Transcript Sequence

Transcript ID

Os01t0809900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34406376:34409200:1 gene:Os01g0809900 gene_biotype:protein_coding transcript_biotype:protein_coding description:FAD dependent oxidoreductase domain containing protein. (Os01t0809900-01)
Sequence

GGGGCGCGGTCGATACCCAGCCATGCTCCCGCTGCGGCGCTTTGCGGGGGCCTGCCGCCG
GCGAGGCCTCGCCGGGATCGCCCCCGGAGCACCCCGGGAGGCGGCGGACGCGGTGGTGGT
GGGCGCCGGCGTGGTCGGGCTCGCGGTGGCGCGCGCGCTGGCCATGGCCGGCCGCGAGGT
GGTGGTGGTCGAGGCCGCCCCCAGCTTCGGCACCGGCACCAGCTCCCGCAACAGCGAGGT
CATCCACGCCGGCATCTACTACCCTCCCGGCAGCCTAAAGGCTAGTCTTTGTGTAAGAGG
AAGGGAAATGCTCTACAAGTACTGTGCAGAACGAGAAATTCCCCATAAACAGCTCGGTAA
ACTCATCGTTGCTACTGGTGTTGCAGAGACGGCAAAATTGGACATGCTTCTCAAGAATGC
TAAAGAAAATGGGGTGGATGATCTTCAGATGATGGAGGGTTCTGAAGCTATGGAGATGGA
ACCTGAACTTCGCTGTCTTAAGGCTTTACTGTCACCTCGTACTGGGATTGTTGACTCTCA
TTCATTCATGCTCTCCCTTTTGGCTGATGCTGAGAATTTAGGAACAGCCATATCTTACAA
CACAACGGTTACAAATGGATATATTGGAGATGAAGGCCTCGAGCTTCATATTTCTGAAAG
CAAAGCACTGGAGAATCATTCTGTGGGCTCTCCTGTGTCCCCACAACTCATTTTGTTTCC
AAAACTTCTGATAAATTCAGCAGGTTTGAGTGCGGCTCCACTTGCTAAAAGATTCCATGG
CCTTAACCAAGTATTTGTGCCCCCTGCTTATTATGCGCGTGGATGTTACTTCACCCTTTC
TCAAACCAAGAGCCCTTTCAGCCACTTGATCTACCCTCTACCAGAGGATGGTGGCATAGG
GGTACATGTCACGCTAGATTTGAATGGTGTTGTTAGATTTGGCCCAGATGTTGAGTGGAT
AGATGGTGGTAAGGATGTCACGTCATGCTTCCTGAGTAGGTTCGATTACTCAGTCAATCC
TACCAGATGTTCTAAATTTTATCCTGTAATAAGGAAGTATTTTCCTAACCTCAAGGATGA
TTCTTTGGAACCCAGTTATTCTGGGATACGACCAAAGCTTTCTGGCCCGGGGCAGCCTCC
TTCAGATTTTGTTATTCAGGGGGAGGATATCCATGGTGTTCCTGGGCTGGTCAACTTGTT
TGGAATAGAATCCCCTGGTCTGACGTCAAGTTTGGCTATTGCTGAATACATTGTTTCAAG
GTATTTGAGATGAGAGCCCCTCGAGTCAACACTTCATACTTTGTTTCAAGGTATTCTCGC
CTTCATGCGGCGCGGAAGCCGGCAGGGTCATGTGAATCACATTACTTGTGTATTTATGAT
TGTGATCTTTGTTTGCCCTTTGCATCAACAAAACACCTTTCGGCAACTTGATAGGCTTGC
AAGGCAATTCTTGTATTCCTTGTTTTCTTTTCTTTCTTTTGAGGATTTTGCAAGCTGTGT
TGCAAGTGTTATATTTTGGCAGTTTGGCTGAGATCCGAACTTAGCTATTGCAATAATGTA
TAGAGAAGCACGAAAACTGGCATTC