Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0808400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34325310:34327888:1 gene:Os01g0808400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 2 description:Similar to Calcium-dependent protein kinase (Fragment). (Os01t0808400-01)
Sequence	ATGGGCAACTGCTGTCCTGGCTCTGGGGATGCGGAGCCCGCCTCCTCCGACGCCTCCACC GGCAACGGCTCGTCCTCCTTCAAGGCCGGCGCGTCGCCGTCGTCGGCGCCCGCGCAGAAC AAGCCGCCGGCGCCCATCGGGCCCGTGCTCGGCCGCCCCATGGAGGACGTCCGGAGCATC TACACCATCGGCAAGGAGCTCGGGCGCGGGCAGTTCGGCGTCACCTCCCTGTGCACCCAC AAGGCGACGGGGCAGAAGTTCGCGTGCAAGACCATCGCCAAGCGGAAGCTGTCCACCAAG GAGGACGTGGAGGACGTGCGGCGGGAGGTGCAGATCATGTACCACCTCGCCGGGCAGCCC AACGTGGTGGAGCTCAAGGGCGCCTACGAGGACAAGCAGTCCGTCCACCTCGTCATGGAG CTCTGCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCACTACACCGAGCGC GCCGCCGCCTCGCTCCTCCGCACCATCGTCGAGATCATCCACACCTGCCACTCCCTCGGC GTCATCCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCCTCAGCAAGGACGAGGACGCC CCTCTCAAGGCCACCGACTTCGGCCTCTCCGTCTTCTTCAAGCAAGGAGAGGTGTTCAAG GACATCGTCGGCAGCGCGTACTACATCGCGCCGGAGGTGCTGAAGCGGAGCTACGGCCCC GAGGCGGACATCTGGAGCGTCGGCGTCATCCTCTACATCCTCCTCTGCGGTGTTCCTCCA TTCTGGGCTGAATCGGAGCATGGCATCTTCAATTCCATCCTGAGAGGGCAGGTGGACTTC ACCAGTGACCCATGGCCACGCATTTCAGCTAGCGCCAAGGACCTTGTCAGGAAGATGCTC AACTCCGACCCCAAGAAGAGAATTTCAGCCTACGAAGTCCTCAATCACCCGTGGATCAAG GAAGATGGAGAAGCACCTGACACGCCGCTTGACAACGCTGTCATGAACAGGCTCAAGCAG TTCAGGGCTATGAACCAATTCAAGAAAGCAGCGCTAAGGGTCATTGCTGGATGCTTGTCG GAGGAAGAGATCAGAGGGCTGAAGGAGATGTTCAAGAGCATGGACTCTGACAACAGCGGC ACCATTACCGTCGATGAGCTGCGCAAAGGGCTGTCCAAGCAAGGGACCAAGCTCACGGAG GCCGAAGTGCAGCAGCTAATGGAGGCTGCCGACGCGGACGGGAACGGAACCATCGATTAC GACGAGTTCATCACAGCGACGATGCACATGAACAGGATGGACAGAGAGGAGCATCTTTAC ACCGCGTTTCAGTATTTCGACAAGGACAACAGCGGCTGCATTTCGAAGGAGGAGCTCGAG CAAGCGCTGAGGGAGAAAGGTCTTCTCGATGGCAGAGACATCAAAGACATCATATCAGAA GTCGACGCCGATAACGATGGAAGGATAGACTACAGCGAGTTCGCGGCGATGATGCGGAAG GGAAACCCGGAGGCCAATCCCAAGAAGCGACGGGACGTTGTGATATAG

Peptide Sequence

PEP ID	Os01t0808400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34325310:34327888:1 gene:Os01g0808400 transcript:Os01t0808400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 2 description:Similar to Calcium-dependent protein kinase (Fragment). (Os01t0808400-01)
Sequence	MGNCCPGSGDAEPASSDASTGNGSSSFKAGASPSSAPAQNKPPAPIGPVLGRPMEDVRSI YTIGKELGRGQFGVTSLCTHKATGQKFACKTIAKRKLSTKEDVEDVRREVQIMYHLAGQP NVVELKGAYEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVEIIHTCHSLG VIHRDLKPENFLLLSKDEDAPLKATDFGLSVFFKQGEVFKDIVGSAYYIAPEVLKRSYGP EADIWSVGVILYILLCGVPPFWAESEHGIFNSILRGQVDFTSDPWPRISASAKDLVRKML NSDPKKRISAYEVLNHPWIKEDGEAPDTPLDNAVMNRLKQFRAMNQFKKAALRVIAGCLS EEEIRGLKEMFKSMDSDNSGTITVDELRKGLSKQGTKLTEAEVQQLMEAADADGNGTIDY DEFITATMHMNRMDREEHLYTAFQYFDKDNSGCISKEELEQALREKGLLDGRDIKDIISE VDADNDGRIDYSEFAAMMRKGNPEANPKKRRDVVI

Transcript Sequence

Transcript ID	Os01t0808400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34325310:34327888:1 gene:Os01g0808400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CALCIUM-DEPENDENT PROTEIN KINASE 2 description:Similar to Calcium-dependent protein kinase (Fragment). (Os01t0808400-01)
Sequence	TTACGGCTCCGCATCCCCCACCACCACACAGACGCCCAACGTGATCGACGCGCGCGCGCT CCCCCGCGGCCGCGCCGCCGCCGCGTGCCCGGCTGTCGTCGTCGTCGCGCGCCGCCATGG GCAACTGCTGTCCTGGCTCTGGGGATGCGGAGCCCGCCTCCTCCGACGCCTCCACCGGCA ACGGCTCGTCCTCCTTCAAGGCCGGCGCGTCGCCGTCGTCGGCGCCCGCGCAGAACAAGC CGCCGGCGCCCATCGGGCCCGTGCTCGGCCGCCCCATGGAGGACGTCCGGAGCATCTACA CCATCGGCAAGGAGCTCGGGCGCGGGCAGTTCGGCGTCACCTCCCTGTGCACCCACAAGG CGACGGGGCAGAAGTTCGCGTGCAAGACCATCGCCAAGCGGAAGCTGTCCACCAAGGAGG ACGTGGAGGACGTGCGGCGGGAGGTGCAGATCATGTACCACCTCGCCGGGCAGCCCAACG TGGTGGAGCTCAAGGGCGCCTACGAGGACAAGCAGTCCGTCCACCTCGTCATGGAGCTCT GCGCCGGCGGCGAGCTCTTCGACCGGATCATCGCCAAGGGCCACTACACCGAGCGCGCCG CCGCCTCGCTCCTCCGCACCATCGTCGAGATCATCCACACCTGCCACTCCCTCGGCGTCA TCCACCGCGACCTCAAGCCCGAGAACTTCCTCCTCCTCAGCAAGGACGAGGACGCCCCTC TCAAGGCCACCGACTTCGGCCTCTCCGTCTTCTTCAAGCAAGGAGAGGTGTTCAAGGACA TCGTCGGCAGCGCGTACTACATCGCGCCGGAGGTGCTGAAGCGGAGCTACGGCCCCGAGG CGGACATCTGGAGCGTCGGCGTCATCCTCTACATCCTCCTCTGCGGTGTTCCTCCATTCT GGGCTGAATCGGAGCATGGCATCTTCAATTCCATCCTGAGAGGGCAGGTGGACTTCACCA GTGACCCATGGCCACGCATTTCAGCTAGCGCCAAGGACCTTGTCAGGAAGATGCTCAACT CCGACCCCAAGAAGAGAATTTCAGCCTACGAAGTCCTCAATCACCCGTGGATCAAGGAAG ATGGAGAAGCACCTGACACGCCGCTTGACAACGCTGTCATGAACAGGCTCAAGCAGTTCA GGGCTATGAACCAATTCAAGAAAGCAGCGCTAAGGGTCATTGCTGGATGCTTGTCGGAGG AAGAGATCAGAGGGCTGAAGGAGATGTTCAAGAGCATGGACTCTGACAACAGCGGCACCA TTACCGTCGATGAGCTGCGCAAAGGGCTGTCCAAGCAAGGGACCAAGCTCACGGAGGCCG AAGTGCAGCAGCTAATGGAGGCTGCCGACGCGGACGGGAACGGAACCATCGATTACGACG AGTTCATCACAGCGACGATGCACATGAACAGGATGGACAGAGAGGAGCATCTTTACACCG CGTTTCAGTATTTCGACAAGGACAACAGCGGCTGCATTTCGAAGGAGGAGCTCGAGCAAG CGCTGAGGGAGAAAGGTCTTCTCGATGGCAGAGACATCAAAGACATCATATCAGAAGTCG ACGCCGATAACGATGGAAGGATAGACTACAGCGAGTTCGCGGCGATGATGCGGAAGGGAA ACCCGGAGGCCAATCCCAAGAAGCGACGGGACGTTGTGATATAGGAGAGGAGCTTGACAA CAAAACAAAAACATGATCTTCATCATCGATCAGTTTTGGCATCGAAAAACATTTGTCACG ACAGGTTGCACACACACACACACACTCCAGAGGAATTGCTTGCTGCTGTTTCATGGCATG GTATTACATGCACCTAAAATGATGAAATTAATTGGAAGGGATGGTGAGCAGGG