Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0802850-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:34017713:34019239:-1 gene:Os01g0802850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0802850-00)
Sequence

ATGGCCGTGGGGAAGGAGGGCGGCGGCGGCGCTGGCGGCGAGGGGGGCATGTCGGATTCG
GTGATCCGGAAGGTGCTGGTGTCGTACATGTACGTGGCGGTGTGGATCTTCCTCTCCTTC
ACGGTCATCGTCTACAACAAGTACATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCC
ATCTCGCTCACCATGGTGCACATGGCCTTCTGCTCGTCCCTCGCCATCGCGCTCGTCCGC
CTCCTCCGCGTCGTCGAGCTCCCGTCGTCCCCCGCCATGACGCCGCAGCTCTACACCTCC
TCGGTGCTCCCCATCGGCGCGCTCTACTCGCTCTCCCTCTGGTTCTCCAACTCCGCGTAC
ATCTACCTCTCCGTCTCCTTCATCCAGATGCTCAAGGCGCTCATGCCCGTCGCCGTGTAC
TCCATCGGCGTGCTCTTCAAGAAGGAGAACTTCAAGTCCTCCGCCATGCTCAACATGCTC
TCCATCTCCTTCGGCGTCGCCATCGCCGCCTACGGCGAGGCCCGCTTCGACGCCCGCGGC
GTCGCGCTCCAGCTCGCCGCCGTAGCCTTCGAGGCCACTCGCCTCGTCCTCATCCAGATC
CTCCTCACCTCCAAGGGGATCTCGCTCAACCCCATCACCTCGCTCTACTACGTCGCGCCG
TGCTGCCTCGCCTTCCTCGTCATTCCCTGGGCCTTCGTCGAGCTGCCCAGGCTGCGCGCC
GTCGGCACGTTCCAGCCAGACTTCTTCATCTTCGGCACCAACTCCCTGTGCGCCTTTGCG
CTCAACCTGGCAGTCTTCTTGCTCGTCGGCAAGACGTCCGCGCTTACCATGAACGTCGCC
GGCGTCGTCAAGGATTGGCTGCTCATCGCCTTCTCCTGGTCTGTGATCCGGGACACGGTC
ACGCCGATCAACCTGTTCGGCTACGGGATCGCATTCCTCGGTGTAGGCTACTACAACCAC
GTCAAGCTTCAGGCGCTCAAGGCGAAGGAGGCGCAGAAGAAGGCCGCACAGGCCGACGAG
GAGGCCGGCTCGCTGCTGCAGGAGCGTGACTCGCACGGCGAACGCAAGAGCGACAACCAG
GCCTAA

Peptide Sequence

PEP ID

Os01t0802850-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:34017713:34019239:-1 gene:Os01g0802850 transcript:Os01t0802850-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0802850-00)
Sequence

MAVGKEGGGGAGGEGGMSDSVIRKVLVSYMYVAVWIFLSFTVIVYNKYILDPKMYNWPFP
ISLTMVHMAFCSSLAIALVRLLRVVELPSSPAMTPQLYTSSVLPIGALYSLSLWFSNSAY
IYLSVSFIQMLKALMPVAVYSIGVLFKKENFKSSAMLNMLSISFGVAIAAYGEARFDARG
VALQLAAVAFEATRLVLIQILLTSKGISLNPITSLYYVAPCCLAFLVIPWAFVELPRLRA
VGTFQPDFFIFGTNSLCAFALNLAVFLLVGKTSALTMNVAGVVKDWLLIAFSWSVIRDTV
TPINLFGYGIAFLGVGYYNHVKLQALKAKEAQKKAAQADEEAGSLLQERDSHGERKSDNQ
A

Transcript Sequence

Transcript ID

Os01t0802850-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:34017713:34019239:-1 gene:Os01g0802850 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF250 domain containing protein. (Os01t0802850-00)
Sequence

ATTCTCCACGTGGCCATCTCCCCCCATCCATCCCCCACTCCTCCGCTACTCGCACCGCAC
CGCACCGCCGATTGATTTGGAGAGGAAACCCCCTCCTCTTCCTCCTCCACCTACCTCTCC
TCCTTCCCAGCCAGATCCGCCTCCTCCTCCTCCCCTGCTCCCTCCCAGATCTCACACTCC
ATCTCGCGAGCGCGCCGACGCGGGACAGCTCGCCACCCCGCCCAGATCCACCGTCTCGCC
GGAGCCGGAGAGACCGAGCGGCGGGCGGCGGGGAGGAGGATGGCCGTGGGGAAGGAGGGC
GGCGGCGGCGCTGGCGGCGAGGGGGGCATGTCGGATTCGGTGATCCGGAAGGTGCTGGTG
TCGTACATGTACGTGGCGGTGTGGATCTTCCTCTCCTTCACGGTCATCGTCTACAACAAG
TACATCCTCGACCCCAAGATGTACAACTGGCCCTTCCCCATCTCGCTCACCATGGTGCAC
ATGGCCTTCTGCTCGTCCCTCGCCATCGCGCTCGTCCGCCTCCTCCGCGTCGTCGAGCTC
CCGTCGTCCCCCGCCATGACGCCGCAGCTCTACACCTCCTCGGTGCTCCCCATCGGCGCG
CTCTACTCGCTCTCCCTCTGGTTCTCCAACTCCGCGTACATCTACCTCTCCGTCTCCTTC
ATCCAGATGCTCAAGGCGCTCATGCCCGTCGCCGTGTACTCCATCGGCGTGCTCTTCAAG
AAGGAGAACTTCAAGTCCTCCGCCATGCTCAACATGCTCTCCATCTCCTTCGGCGTCGCC
ATCGCCGCCTACGGCGAGGCCCGCTTCGACGCCCGCGGCGTCGCGCTCCAGCTCGCCGCC
GTAGCCTTCGAGGCCACTCGCCTCGTCCTCATCCAGATCCTCCTCACCTCCAAGGGGATC
TCGCTCAACCCCATCACCTCGCTCTACTACGTCGCGCCGTGCTGCCTCGCCTTCCTCGTC
ATTCCCTGGGCCTTCGTCGAGCTGCCCAGGCTGCGCGCCGTCGGCACGTTCCAGCCAGAC
TTCTTCATCTTCGGCACCAACTCCCTGTGCGCCTTTGCGCTCAACCTGGCAGTCTTCTTG
CTCGTCGGCAAGACGTCCGCGCTTACCATGAACGTCGCCGGCGTCGTCAAGGATTGGCTG
CTCATCGCCTTCTCCTGGTCTGTGATCCGGGACACGGTCACGCCGATCAACCTGTTCGGC
TACGGGATCGCATTCCTCGGTGTAGGCTACTACAACCACGTCAAGCTTCAGGCGCTCAAG
GCGAAGGAGGCGCAGAAGAAGGCCGCACAGGCCGACGAGGAGGCCGGCTCGCTGCTGCAG
GAGCGTGACTCGCACGGCGAACGCAAGAGCGACAACCAGGCCTAAAGCGTGGGATCTGGT
CCAACAGCACACGCAATTTGGTTGGTTCTAATGAATTCATCAATGTGTGATCCTCTACTA
GTTTGATGCAAAATCTGTTCATTTCTTGTCTTAATTTGTGGTAGGAAGGCAAATAAATAC
AGGAAAAGTACGATCTTTGTGTCGGGC