Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0802700-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:34003692:34006460:-1 gene:Os01g0802700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 9 description:Auxin efflux carrier domain containing protein. (Os01t0802700-01)
Sequence	ATGATTACGGGTTCGGAGGTGTACCAGGTGGTGGAGGCGATGGCGCCGCTGTACACGGCG GCGGCGCTGGGGTACGGGTCGGTGCGGTGGCTGAAGGCGTTCTCCAACGAGCAGTGCGCC GGGATCAACCACTTCGTGGCGCTCTACGCCGTGCCGGTGCTCATCTTCGACATGGTGTCC ACCAACAACGTGTACAAGATGAACGGCCGCCTCATCGCCGCCGACACGCTGCAGAAGGCC GTGCTGCTGCTGGGCCTCATGGCGTGGGCGCTCTGGGAGCGGTCGCGCGCGCGCGGCGCC GGGGCCAAGGCCAAGGCGGCGGTGTCGTCGCCGCTGCAGTGGGTCATCACCTGCTTCTCC GTCGCGTCGCTGCCCAACACCATCATCATGGGCGTCCCGCTCCTCAACGGCATGTACGGG CCCGTGTCCAAGGACCTCATGAAGCAGATCGTCGTCATGCAGTTCTGCATCTGGTACAAC GTCATCATCTTCCTCTACGAGTACATGGCGGCGCGTAGATCGGCCTCGGCGCCGCCGCCG GCGTCGTCGGAGGGCAGCGCCAAGATCAGCCCTTCGTCGCCGGTGAAAGCTGCTGCGGCG GCGGCGGACACAAACGGCAATGCTGTCGCGGCCGACCGGCCGCAAGAAGTGGCGGTGAAC ATCGAAATCACGGAGATGGCGGCGTCCACGGCACGAGACGGCGTGTCCGGCGAGACGACG GCGGCCGCCAAGGAGGTGAGCTCTGGTGAAGTTGCTCCGGTGGAAGAGGAGGAGGCGTCT GCGCCAGCGCCGTCGATGAAGCACGTCATCTGGATGGCGGTGAAGAAGCTGCTACAGATT CCGAATACCTATGCAAGCTTCCTTGGCCTCATCTGGTCTCTAATCGCATTCAAGTGTGGA TTCTCGATGCCAAAAATCGTCGAGGACTCTCTGTTCACCATTCGTACCACCGCTGTAGGC CTAAGCATGTTTTCTTCAGGGACGTTCATAGCGCGGCAGTCGCGGTTCGTGCCGTGCGGA TACAAGATAGCGTCGTTCTCCATGGTCATCAAGTTTCTGATAGGCCCGGTTGTGATGCTG TTCGCCTCGCTCGTCATCGGCATGCACGGCACACTTCTGCACATCGCTGTTGTGCAGGCG GCTCTCCCCCTGGCAGTGACATCATTTGTGTACGCTGAAGAGTACAAGGTCCACGCAGAC ATCATGAGCACAGGGGTTATTCTTGGGATATTTATATCACTTCCTGTGACAATTGTTTAC TATATTCTGTTGGGGCTGTGA

Peptide Sequence

PEP ID	Os01t0802700-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:34003692:34006460:-1 gene:Os01g0802700 transcript:Os01t0802700-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 9 description:Auxin efflux carrier domain containing protein. (Os01t0802700-01)
Sequence	MITGSEVYQVVEAMAPLYTAAALGYGSVRWLKAFSNEQCAGINHFVALYAVPVLIFDMVS TNNVYKMNGRLIAADTLQKAVLLLGLMAWALWERSRARGAGAKAKAAVSSPLQWVITCFS VASLPNTIIMGVPLLNGMYGPVSKDLMKQIVVMQFCIWYNVIIFLYEYMAARRSASAPPP ASSEGSAKISPSSPVKAAAAAADTNGNAVAADRPQEVAVNIEITEMAASTARDGVSGETT AAAKEVSSGEVAPVEEEEASAPAPSMKHVIWMAVKKLLQIPNTYASFLGLIWSLIAFKCG FSMPKIVEDSLFTIRTTAVGLSMFSSGTFIARQSRFVPCGYKIASFSMVIKFLIGPVVML FASLVIGMHGTLLHIAVVQAALPLAVTSFVYAEEYKVHADIMSTGVILGIFISLPVTIVY YILLGL

Transcript Sequence

Transcript ID	Os01t0802700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:34003692:34006460:-1 gene:Os01g0802700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIN PROTEIN 9 description:Auxin efflux carrier domain containing protein. (Os01t0802700-01)
Sequence	AAACTCTCACACTACAACAACCACAACACACTACTACTAGTGAGACTAGTAAGCGTCATC ACGAGATCCAGGTTTAATAGATCGTTTAATCTACCACCGTTGATTTAGAAAGGGGTTGAG GGGAGGGTAGTAGTAGCTAAGTTAGGGCAAAGATGATTACGGGTTCGGAGGTGTACCAGG TGGTGGAGGCGATGGCGCCGCTGTACACGGCGGCGGCGCTGGGGTACGGGTCGGTGCGGT GGCTGAAGGCGTTCTCCAACGAGCAGTGCGCCGGGATCAACCACTTCGTGGCGCTCTACG CCGTGCCGGTGCTCATCTTCGACATGGTGTCCACCAACAACGTGTACAAGATGAACGGCC GCCTCATCGCCGCCGACACGCTGCAGAAGGCCGTGCTGCTGCTGGGCCTCATGGCGTGGG CGCTCTGGGAGCGGTCGCGCGCGCGCGGCGCCGGGGCCAAGGCCAAGGCGGCGGTGTCGT CGCCGCTGCAGTGGGTCATCACCTGCTTCTCCGTCGCGTCGCTGCCCAACACCATCATCA TGGGCGTCCCGCTCCTCAACGGCATGTACGGGCCCGTGTCCAAGGACCTCATGAAGCAGA TCGTCGTCATGCAGTTCTGCATCTGGTACAACGTCATCATCTTCCTCTACGAGTACATGG CGGCGCGTAGATCGGCCTCGGCGCCGCCGCCGGCGTCGTCGGAGGGCAGCGCCAAGATCA GCCCTTCGTCGCCGGTGAAAGCTGCTGCGGCGGCGGCGGACACAAACGGCAATGCTGTCG CGGCCGACCGGCCGCAAGAAGTGGCGGTGAACATCGAAATCACGGAGATGGCGGCGTCCA CGGCACGAGACGGCGTGTCCGGCGAGACGACGGCGGCCGCCAAGGAGGTGAGCTCTGGTG AAGTTGCTCCGGTGGAAGAGGAGGAGGCGTCTGCGCCAGCGCCGTCGATGAAGCACGTCA TCTGGATGGCGGTGAAGAAGCTGCTACAGATTCCGAATACCTATGCAAGCTTCCTTGGCC TCATCTGGTCTCTAATCGCATTCAAGTGTGGATTCTCGATGCCAAAAATCGTCGAGGACT CTCTGTTCACCATTCGTACCACCGCTGTAGGCCTAAGCATGTTTTCTTCAGGGACGTTCA TAGCGCGGCAGTCGCGGTTCGTGCCGTGCGGATACAAGATAGCGTCGTTCTCCATGGTCA TCAAGTTTCTGATAGGCCCGGTTGTGATGCTGTTCGCCTCGCTCGTCATCGGCATGCACG GCACACTTCTGCACATCGCTGTTGTGCAGGCGGCTCTCCCCCTGGCAGTGACATCATTTG TGTACGCTGAAGAGTACAAGGTCCACGCAGACATCATGAGCACAGGGGTTATTCTTGGGA TATTTATATCACTTCCTGTGACAATTGTTTACTATATTCTGTTGGGGCTGTGAGCCTGTG ATTGAGACATCTAAATTTAGTCGAAGGCTAATTAAAGTTGCATGTGTGCTGATGTGCATA TATGTAGGAAGACAGAATACAAACAGTAAAAATACTGAAGGATGACAACAAGGTGAATTG ATTTCCCTCCGGAGCCTGAAGATTGGGGTTCTGGCGAGAGATACAGTGAGATGTGACTGT AATGTTTGGTAATAATAAGATGTCACAAAAACGCGGCATATATGCTGAAACTTTTGCAAT GTACAGCAAGTATACAATGAACAGGGCTTATTACAGCCCACCAGTTGATTCTTCG