Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0802100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33971226:33976464:1 gene:Os01g0802100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, CDP-ME kinase, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase description:Similar to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase) (CDPMEK). (Os01t0802100-01)
Sequence	ATGGCTTGCTCCACCCACCTCCTGTCCCAGAGCCTCTACCCGCTCAACCGCGCTAACCCG GCAGCCGCGCGCGGGCACCTCCGGTTCCAGGCTTCTCCCAGTGTGAGGCTCGGCTCCGGC ACCAGTCGCCGCCGGGCGCTGGGCCTGAGAGTCGCCGCGTCGGCGGAGCAAGGGAGGAGG CAAGTGGAGGTTGAGTATGATCTACAAGCAAAGTTCAACAAGCTAGCGGACCAAATTGAC CAGAATGCTGGGATTACACGGCTGAACCTATTCTCACCTTGCAAAATTAATGTGTTCTTG AGGATAACGGGTAAGAGACCAGATGGGTTCCATGACCTGGCTTCTCTGTTTCATGTGATA AGTTTGGGTGATACTATCAAATTCTCATTGTCACCAAGTAAGAGCAAAGATCGCTTGTCA ACCAATGTAGCAGGTGTCCCAGTTGATGAAAGCAATTTGATCATCAAGGCACTCAATCTT TACCGCAAGAAAACTGGAACTGACAACTTTTTTTGGATTCATCTTGATAAGAAGGTCCCT ACTGGTGCTGGTCTTGGTGGTGGAAGCAGTAATGCTGCAACTGCGCTGTGGGCCGCCAAC CAGTTTAGTGGCTGCATTGCTTCAGAAAAGGAGCTTCAGGAGTGGTCTGGAGAGATAGGA TCGGATATTCCCTTCTTCTTTTCACAAGGAGCAGCGTATTGTACCGGTAGAGGAGAGATT GTTGAAGATATTCGGAATCCATTGCCAGCAAATTTGCCGATGGTACTAGTAAAGCCACCT GAAGCATGCTCAACAGCTGAAGTTTACAAGCGGCTCAGGTTAGAGCACACAAGTCAAACT GATCCCTTGGTATTGCTCAAGGAAATTACTGAAAATGGGATATCACAGGATGCCTGTGTT AATGATCTAGAACCTCCAGCATTTGAGGTGTTGCCATCACTAAAGAGGTTGAAGAAACGT ATAATTGCTGCTAACCGGGGAGATTATGATGCTGTTTTTATGTCAGGAAGTGGAAGCACA ATTGTTGGGATTGGTTCACCAGATCCGCCTGCATTTGTGTATGATGATGATGACTACAAG GATACTTTTGTGTCAGAGGCCTGCTTCCTCACTCGTAATGAGAACGAGTGGTACAGAGAA CCAATCTCATCGAAAATCACTAGCGAGGAAGATTTACCTCCGGAGGTAGCATCAGTTTCT GACTGA

Peptide Sequence

PEP ID	Os01t0802100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33971226:33976464:1 gene:Os01g0802100 transcript:Os01t0802100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, CDP-ME kinase, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase description:Similar to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase) (CDPMEK). (Os01t0802100-01)
Sequence	MACSTHLLSQSLYPLNRANPAAARGHLRFQASPSVRLGSGTSRRRALGLRVAASAEQGRR QVEVEYDLQAKFNKLADQIDQNAGITRLNLFSPCKINVFLRITGKRPDGFHDLASLFHVI SLGDTIKFSLSPSKSKDRLSTNVAGVPVDESNLIIKALNLYRKKTGTDNFFWIHLDKKVP TGAGLGGGSSNAATALWAANQFSGCIASEKELQEWSGEIGSDIPFFFSQGAAYCTGRGEI VEDIRNPLPANLPMVLVKPPEACSTAEVYKRLRLEHTSQTDPLVLLKEITENGISQDACV NDLEPPAFEVLPSLKRLKKRIIAANRGDYDAVFMSGSGSTIVGIGSPDPPAFVYDDDDYK DTFVSEACFLTRNENEWYREPISSKITSEEDLPPEVASVSD

Transcript Sequence

Transcript ID	Os01t0802100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33971226:33976464:1 gene:Os01g0802100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase, CDP-ME kinase, 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase description:Similar to 4-diphosphocytidyl-2-C-methyl-D-erythritol kinase, chloroplast precursor (EC 2.7.1.148) (CMK) (4-(cytidine-5'-diphospho)-2-C-methyl- D-erythritol kinase) (CDPMEK). (Os01t0802100-01)
Sequence	AATCCCCGTCATCTCCAAGAGCCTTCACCCATTGCGCTCCTCTTCGCCTCTGGTAAGCAG CAGCAGCAGCATCCGCAGGAGCAGCCATGGCTTGCTCCACCCACCTCCTGTCCCAGAGCC TCTACCCGCTCAACCGCGCTAACCCGGCAGCCGCGCGCGGGCACCTCCGGTTCCAGGCTT CTCCCAGTGTGAGGCTCGGCTCCGGCACCAGTCGCCGCCGGGCGCTGGGCCTGAGAGTCG CCGCGTCGGCGGAGCAAGGGAGGAGGCAAGTGGAGGTTGAGTATGATCTACAAGCAAAGT TCAACAAGCTAGCGGACCAAATTGACCAGAATGCTGGGATTACACGGCTGAACCTATTCT CACCTTGCAAAATTAATGTGTTCTTGAGGATAACGGGTAAGAGACCAGATGGGTTCCATG ACCTGGCTTCTCTGTTTCATGTGATAAGTTTGGGTGATACTATCAAATTCTCATTGTCAC CAAGTAAGAGCAAAGATCGCTTGTCAACCAATGTAGCAGGTGTCCCAGTTGATGAAAGCA ATTTGATCATCAAGGCACTCAATCTTTACCGCAAGAAAACTGGAACTGACAACTTTTTTT GGATTCATCTTGATAAGAAGGTCCCTACTGGTGCTGGTCTTGGTGGTGGAAGCAGTAATG CTGCAACTGCGCTGTGGGCCGCCAACCAGTTTAGTGGCTGCATTGCTTCAGAAAAGGAGC TTCAGGAGTGGTCTGGAGAGATAGGATCGGATATTCCCTTCTTCTTTTCACAAGGAGCAG CGTATTGTACCGGTAGAGGAGAGATTGTTGAAGATATTCGGAATCCATTGCCAGCAAATT TGCCGATGGTACTAGTAAAGCCACCTGAAGCATGCTCAACAGCTGAAGTTTACAAGCGGC TCAGGTTAGAGCACACAAGTCAAACTGATCCCTTGGTATTGCTCAAGGAAATTACTGAAA ATGGGATATCACAGGATGCCTGTGTTAATGATCTAGAACCTCCAGCATTTGAGGTGTTGC CATCACTAAAGAGGTTGAAGAAACGTATAATTGCTGCTAACCGGGGAGATTATGATGCTG TTTTTATGTCAGGAAGTGGAAGCACAATTGTTGGGATTGGTTCACCAGATCCGCCTGCAT TTGTGTATGATGATGATGACTACAAGGATACTTTTGTGTCAGAGGCCTGCTTCCTCACTC GTAATGAGAACGAGTGGTACAGAGAACCAATCTCATCGAAAATCACTAGCGAGGAAGATT TACCTCCGGAGGTAGCATCAGTTTCTGACTGAGGGAGTGGATTCTATATTAGATCTCATT TTGCGGTTATACAGGATACAACATACAGGTGTGCACTCACTGTGATTAGCTTTAAAATGG TACTTCCACTAGGAAAAGAACCATTCCACCTTGAAATTTGTTAACGGGACTAGGAGTATC AATCATTGATTTTGAAGTGTAGGTAAGATCGTTTACTGTGTGTATTTGCAGCATGCGTCG TAGAAACTTGTTACGGGCATACCAAGTGACACACTTGATATGACAGAATACATCCTCCCT GCAAAAACTGTTTGCACTTCCTGTGAGTAGAAAGCACCAGGTTTGGATTTT