Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0801901-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:33961844:33963347:1 gene:Os01g0801901 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 7 description:Similar to Transcription factor (Fragment). (Os01t0801901-00)
Sequence

ATGGATGATGAAGTTCACCTACCAATTCCAAGCCACCTTCTGTTTTCACATCCCGAGATC
TCCCATGGCTTTGATGAACTCCTAAAGAACACAACTACGTGTACTCACTCACACACTTGC
AATCCACCGGGTCCATCAGTTGCTATGCATACTCACACATGCCTCCACACACACATTCAA
GTCATGGCTTCTGGTGAAAACAATGTTGAAGAGGAGCTGAGAAAGACCCGTAAGCCTCTG
GGAAATAGAGAAGCAGTGCGCAAGTACCGAGAGAAGAAGAAAGCGCATGCAGCTTTCTTG
GAGGAGGAAGTCAAGAAACTTCGCACCACAAATCAGCAGCTCTTGAGGAGATTGCAGGGG
CATATATCACTCGAGGCTGAGGTGGTGAGGTTAAGAGCCCTTTTGTTTGATATCCGAGGC
AAGATTGATGCAGAGATTGGTACTTTCCCCTTTCAGAAGCAGTGCAGTTTTGGTTCTGTT
ACTTGTACAGACCATTCTCCGTGCTTTAACACTAGCACTGAGGTAGCAGTCCGGGAAGAG
AGCTCTAGACCAACAATTGTGGATTGCGGGATTGATGGAACTGGCATTATTTCGCACGAG
CTTGATATTCCCAAAATGGTGAATTCAGTGGATGTCATTCCAAGCTTTGTGAATTCTGCC
TCATTGACTGAATGA

Peptide Sequence

PEP ID

Os01t0801901-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:33961844:33963347:1 gene:Os01g0801901 transcript:Os01t0801901-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 7 description:Similar to Transcription factor (Fragment). (Os01t0801901-00)
Sequence

MDDEVHLPIPSHLLFSHPEISHGFDELLKNTTTCTHSHTCNPPGPSVAMHTHTCLHTHIQ
VMASGENNVEEELRKTRKPLGNREAVRKYREKKKAHAAFLEEEVKKLRTTNQQLLRRLQG
HISLEAEVVRLRALLFDIRGKIDAEIGTFPFQKQCSFGSVTCTDHSPCFNTSTEVAVREE
SSRPTIVDCGIDGTGIISHELDIPKMVNSVDVIPSFVNSASLTE

Transcript Sequence

Transcript ID

Os01t0801901-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33961844:33963347:1 gene:Os01g0801901 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:b-ZIP TRANSCRIPTION FACTOR 7 description:Similar to Transcription factor (Fragment). (Os01t0801901-00)
Sequence

GAGATATCCAAAATAAAATAATAGAGAAGGCAAGCAAACATTAAGAAAAGATTGGTGGAG
AGGAGATGGACTGAAAAGTGTAGGGAAAAGGCAAAGAAGGCTTCTTCTCTTGCGAGGACA
ATCCATCAATTCTAGCCTTCCCCTCGTCAATATGAGTTCTTGATGCGCTTCGTAGTTCAG
GAGAAGTTTTGTCCTAATTGCGATCTTGTGAGGTTTTGCTATTTAGTGGTGATAGTTGTC
CATATGTTCATGCTTCTGGCCATCATGGGAATTTGTTAAACCATAGGAGGAGAGTTTTCT
TGGCACATTTTGTGACTATGGATGATGAAGTTCACCTACCAATTCCAAGCCACCTTCTGT
TTTCACATCCCGAGATCTCCCATGGCTTTGATGAACTCCTAAAGAACACAACTACGTGTA
CTCACTCACACACTTGCAATCCACCGGGTCCATCAGTTGCTATGCATACTCACACATGCC
TCCACACACACATTCAAGTCATGGCTTCTGGTGAAAACAATGTTGAAGAGGAGCTGAGAA
AGACCCGTAAGCCTCTGGGAAATAGAGAAGCAGTGCGCAAGTACCGAGAGAAGAAGAAAG
CGCATGCAGCTTTCTTGGAGGAGGAAGTCAAGAAACTTCGCACCACAAATCAGCAGCTCT
TGAGGAGATTGCAGGGGCATATATCACTCGAGGCTGAGGTGGTGAGGTTAAGAGCCCTTT
TGTTTGATATCCGAGGCAAGATTGATGCAGAGATTGGTACTTTCCCCTTTCAGAAGCAGT
GCAGTTTTGGTTCTGTTACTTGTACAGACCATTCTCCGTGCTTTAACACTAGCACTGAGG
TAGCAGTCCGGGAAGAGAGCTCTAGACCAACAATTGTGGATTGCGGGATTGATGGAACTG
GCATTATTTCGCACGAGCTTGATATTCCCAAAATGGTGAATTCAGTGGATGTCATTCCAA
GCTTTGTGAATTCTGCCTCATTGACTGAATGAAACTATCAAGTTCCTCATAAGTTCTCCA
TGCTAGCTCCGGTTGCTTGATGTTGCGACCTTGTGGGTAATAGCTTTCCGTTGTTATAGC
CTGCTCGAATAAAATGGTGGCTATGATACGAGTAAAAGTCTAAAATTAGTCTACCAATGC
AGATGTTACTGACTGTAAGTGTTGGGTACTTATGATTTATTATGAAGTGTGATATGTGCT
GTACTGTATGATAGTATTAGAAG