Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0801600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:33952187:33956006:-1 gene:Os01g0801600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycerol-3-phosphate dehydrogenase. (Os01t0801600-01)
Sequence

ATGGGCGGGGCGGAGGACGCGCCGCGCGCGGCGGCGGCGAACGGGCACGGGAATGGGGCC
ACCGTGGAGGAGAAGCTGGACGAGCTGCGGCGCCTGCTGGGCAAGGCCGACGGCGACCCG
CTCCGGATCGTCGGCGTCGGCGCCGGGGCCTGGGGGAGCGTCTTCTGCGCGCTGATGCAG
GACGCGTACGGACACCTCCGCGACAAGGTGCAGGTCCGCATCTGGCGCCGCCCGGGCCGC
GCCGTCGACCGCGCCACCGCCGAGCACCTCTTCGAGGTCATCAACGCCCGGGAGGACGTC
CTCCGCCGCCTGATCCGCCGCTGCGCCTACCTCAAGTACGTCGAGGGCCGCCTCGGCGAC
CGCACCCTCTACGCCGACGAGATACTCAGGGACGGCTTCTGCCTCAACATGATCGACACG
CCGCTCTGCCCGCTCAAGGTCGTCACCAACCTCCAGGAGGCCGTCTGGGACGCCGACATT
GTCATCAACGGGCTGCCGTCCACGGACACCAGGGAAGTCTTCGGGGAGATTGGGAGGTAC
TGGAAGGAGAGGATTACTGCCCCCATCATCCTCTCTCTGGCCAAAGGGATAGAGGCCTCC
CTGGATCCCCTGCCACGGATCATAACTCCCACACAGATGATTAGCAATGCAACGGGGGTT
CCATTGGAAAACATTCTTTATCTTGGAGGCCCTAACATTGCTTCAGAAATTTACAATAAA
GAATATGCAAATGCTCGTATATGTGGAGCTGACAAATGGAGAAAACCTCTTGCTAAATTT
TTGAGGCAGCCTCATTTTATTGTATGGGATAATAGTGATCTCATTACACATGAAGTCATG
GGAGGTTTGAAAAATGTGTATGCCATTGGTGCCGGTATGGTGGCAGCTCTAACAAATGAG
AGTGCAACCAGCAAATCCGTTTACTTTGCTCTTTGCACATCTGAAATGATTTACATAACC
CACCTTTTGGAAGAAGAGCCTGAAAAACTTGCTGGGCCATTATTGGCTGACACTTATGTC
ACATTGCTGAAGGGTCGTAATGCATGGTATGGGCAGAAACTAGCTAAAGGTGAACTGACA
CTAGAGATGGGTGACAGCATAAAAGGCAAAGGAACCATTCAGGGTGTCTCTGCAGTCAAT
GCATTTTATGAACTCCTGAGTCAGGATAGCTTAAGCGTAATGCATCCTGAAGCCAACAGA
TCTGTTGCACCGGTTGAGATGTGCCCAATCCTGAAGGCACTGTACAAAATTTTGATCAAG
AGGGAACTTCCTCCTGATTCGATCCTTCAGGCCATAAGAGATGAAACAATGTATGATCCA
CGTGAAAGAATTGAGATGGCGCAGGGCCATTCACTTTACCGGCCATCTCTTCTTGGTCAA
CCTAAAGGAGATGCCAAAGCTTAG

Peptide Sequence

PEP ID

Os01t0801600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:33952187:33956006:-1 gene:Os01g0801600 transcript:Os01t0801600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycerol-3-phosphate dehydrogenase. (Os01t0801600-01)
Sequence

MGGAEDAPRAAAANGHGNGATVEEKLDELRRLLGKADGDPLRIVGVGAGAWGSVFCALMQ
DAYGHLRDKVQVRIWRRPGRAVDRATAEHLFEVINAREDVLRRLIRRCAYLKYVEGRLGD
RTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVWDADIVINGLPSTDTREVFGEIGRY
WKERITAPIILSLAKGIEASLDPLPRIITPTQMISNATGVPLENILYLGGPNIASEIYNK
EYANARICGADKWRKPLAKFLRQPHFIVWDNSDLITHEVMGGLKNVYAIGAGMVAALTNE
SATSKSVYFALCTSEMIYITHLLEEEPEKLAGPLLADTYVTLLKGRNAWYGQKLAKGELT
LEMGDSIKGKGTIQGVSAVNAFYELLSQDSLSVMHPEANRSVAPVEMCPILKALYKILIK
RELPPDSILQAIRDETMYDPRERIEMAQGHSLYRPSLLGQPKGDAKA

Transcript Sequence

Transcript ID

Os01t0801600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33952187:33956006:-1 gene:Os01g0801600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Glycerol-3-phosphate dehydrogenase. (Os01t0801600-01)
Sequence

ATTCCACCCGACCCTGTTCGCTTTCGCTTCGCCTCGTTCGCGGGTCGCGACGCGAGCAGC
GGAGGCGCAACAGGCGGCAAACGTCCCGGGGCGGTGCCGGCAGCCAAGCCAAGCCAAGCC
GCCTCGGTCTCTCCGGCCGACAGTGATTCGGCGGCCAAACCTACCAGCAGCCACCAAAAA
TTGGCGGACGACTCCTCAGATCGCGTCACATGCTGGGCGACGACAAGGGAAGGCGGAGAG
GTGGAGGAGGGAGCAATGGGCGGGGCGGAGGACGCGCCGCGCGCGGCGGCGGCGAACGGG
CACGGGAATGGGGCCACCGTGGAGGAGAAGCTGGACGAGCTGCGGCGCCTGCTGGGCAAG
GCCGACGGCGACCCGCTCCGGATCGTCGGCGTCGGCGCCGGGGCCTGGGGGAGCGTCTTC
TGCGCGCTGATGCAGGACGCGTACGGACACCTCCGCGACAAGGTGCAGGTCCGCATCTGG
CGCCGCCCGGGCCGCGCCGTCGACCGCGCCACCGCCGAGCACCTCTTCGAGGTCATCAAC
GCCCGGGAGGACGTCCTCCGCCGCCTGATCCGCCGCTGCGCCTACCTCAAGTACGTCGAG
GGCCGCCTCGGCGACCGCACCCTCTACGCCGACGAGATACTCAGGGACGGCTTCTGCCTC
AACATGATCGACACGCCGCTCTGCCCGCTCAAGGTCGTCACCAACCTCCAGGAGGCCGTC
TGGGACGCCGACATTGTCATCAACGGGCTGCCGTCCACGGACACCAGGGAAGTCTTCGGG
GAGATTGGGAGGTACTGGAAGGAGAGGATTACTGCCCCCATCATCCTCTCTCTGGCCAAA
GGGATAGAGGCCTCCCTGGATCCCCTGCCACGGATCATAACTCCCACACAGATGATTAGC
AATGCAACGGGGGTTCCATTGGAAAACATTCTTTATCTTGGAGGCCCTAACATTGCTTCA
GAAATTTACAATAAAGAATATGCAAATGCTCGTATATGTGGAGCTGACAAATGGAGAAAA
CCTCTTGCTAAATTTTTGAGGCAGCCTCATTTTATTGTATGGGATAATAGTGATCTCATT
ACACATGAAGTCATGGGAGGTTTGAAAAATGTGTATGCCATTGGTGCCGGTATGGTGGCA
GCTCTAACAAATGAGAGTGCAACCAGCAAATCCGTTTACTTTGCTCTTTGCACATCTGAA
ATGATTTACATAACCCACCTTTTGGAAGAAGAGCCTGAAAAACTTGCTGGGCCATTATTG
GCTGACACTTATGTCACATTGCTGAAGGGTCGTAATGCATGGTATGGGCAGAAACTAGCT
AAAGGTGAACTGACACTAGAGATGGGTGACAGCATAAAAGGCAAAGGAACCATTCAGGGT
GTCTCTGCAGTCAATGCATTTTATGAACTCCTGAGTCAGGATAGCTTAAGCGTAATGCAT
CCTGAAGCCAACAGATCTGTTGCACCGGTTGAGATGTGCCCAATCCTGAAGGCACTGTAC
AAAATTTTGATCAAGAGGGAACTTCCTCCTGATTCGATCCTTCAGGCCATAAGAGATGAA
ACAATGTATGATCCACGTGAAAGAATTGAGATGGCGCAGGGCCATTCACTTTACCGGCCA
TCTCTTCTTGGTCAACCTAAAGGAGATGCCAAAGCTTAGGCAGTTCTTCCTTTTTTTTTT
GGTGCTAGATATCCTGTAAGCTCTGTGTGCTATTATGCTTGCTGCTGCTGCTGTTGTTGT
AACACTAGTGAGTTCCAGCAAGGGACCAAGATCTCAGTTGATTGCTTCAAGACTTGTTGA
GCTTGTTATGTAGTTTGATTTGTTAAACGCCTGAAATGTGTACATAGACGTTGTTTTGTG
TGATCCAATAATAAAATATGCAAAAGGTAATGTTC