Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0801200-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:33930232:33932914:-1 gene:Os01g0801200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0801200-01);Conserved hypothetical protein. (Os01t0801200-02)
Sequence

ATGGGGGAGAGGCGGTCCGGCTACAGGGACAGAGGGGGCGGCGAGCAGGGAAGGTATTGG
AGGCCACCGCGCTCTCACGGAAATGGAAATTTCTCAGTTCCATTGTGGGAAAAGAAATTT
TGCACTGATGCTTGTGCAATCCCATGGGGTAAACTCTGTGAAACCAAGAAATTGATGTCA
TTGTACAAAAATGTGGTTGACTGGGATGATTCAGCTGCATTAGAAACTTTCAACGATGCA
AAAGCTCGTTTCTGTGCTGTATACCATGGCCAACCTTGTGATATCCCGTTACCTGACCCA
AACATGTATATTGACATGGTTAACCAAGATGAACATGTTGATCCTGAATTGGTGGCCGAC
CTTGAGAAATCGCGGCGTTCTTATCCCAAAAGGGATAATACAGCTCCTGATGGCTGGGAC
TCCTTTATATTTACAAACAAGCCAGTTCCAGCCACAGGGTGGGGTGATGGGGAAACAAGC
AACACACCTGGTCAGCAATACCCTACGAACTGGAATAATCACGTGAAACAGCCGACTGAA
GCAAATTGCATGCAAAGTTCAGTAAATTGGGATAATTATGTCAGCCAGCCTCCTCAAGCA
ACAGTTCAGCAAAGCTCGGGAAATTGGGACATGTATGTTAAACAACAAGATCAAGCTAAT
AACTGGGAGGCACCAACCATGCCTGGCACCTGGGACATGAAGGGTGACTCTCTGGATGCA
TGGAAGCGTGATTCCGGCTGGGGTTCTGCAGCTATAGATTCATGGGACAACCATAGAGAG
AACTGTTATGTACCTGACAGCCAGGGCTGGTCTTACGGTCACTGGAAAAGGCGAAACAAT
GAGTCGAGCAGAAGGAATAGCAGGGGTAGAGATAGAGTTGGTCCCATTAGCTCAAAGGCC
ATGAAACCAAAGTACCATTCTGAGGAGCGTAATGGTGCTAATAATGGCTGGAGGCACTGC
CGAGTTAGAAATAACATGCAGTACTCCTATGAGAATCCTGGTTGCAACCAGTCACTAGCA
ATGTGA

Peptide Sequence

PEP ID

Os01t0801200-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:33930232:33932914:-1 gene:Os01g0801200 transcript:Os01t0801200-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0801200-01);Conserved hypothetical protein. (Os01t0801200-02)
Sequence

MGERRSGYRDRGGGEQGRYWRPPRSHGNGNFSVPLWEKKFCTDACAIPWGKLCETKKLMS
LYKNVVDWDDSAALETFNDAKARFCAVYHGQPCDIPLPDPNMYIDMVNQDEHVDPELVAD
LEKSRRSYPKRDNTAPDGWDSFIFTNKPVPATGWGDGETSNTPGQQYPTNWNNHVKQPTE
ANCMQSSVNWDNYVSQPPQATVQQSSGNWDMYVKQQDQANNWEAPTMPGTWDMKGDSLDA
WKRDSGWGSAAIDSWDNHRENCYVPDSQGWSYGHWKRRNNESSRRNSRGRDRVGPISSKA
MKPKYHSEERNGANNGWRHCRVRNNMQYSYENPGCNQSLAM

Transcript Sequence

Transcript ID

Os01t0801200-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33930232:33932914:-1 gene:Os01g0801200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os01t0801200-01);Conserved hypothetical protein. (Os01t0801200-02)
Sequence

CCGGCTGCGAAACCAACGACGGCACCCCAAACCGCCTCCGCCTCCGCCGCCGCTTCCGCT
TAACCTCCTCGCTCTCCTTGACCCCCCCGCCTTTCAATCGGGCGCGGCCGTTCGGGGTTC
GCGTTTTTATCGGATCGCCTCGTTCGTTCCCTCCCCTCCCCTCCCCTTCGCGCGGTTCTT
TGCCGCGCCGCGGGGGTTCCGTTCCGTCGTGGAGCGGCTGGCCCCGGAGCCGGAGGCCAA
GGGGCGTGGACGGTGGAGGGTAATCCGTGGTGTTGAGGGAGCCTTGGTGAGGTGGTGGTT
CGGGCTCTCGCGGCGGCGTCTTCCATGGGGGAGAGGCGGTCCGGCTACAGGGACAGAGGG
GGCGGCGAGCAGGGAAGGTATTGGAGGCCACCGCGCTCTCACGGAAATGGAAATTTCTCA
GTTCCATTGTGGGAAAAGAAATTTTGCACTGATGCTTGTGCAATCCCATGGGGTAAACTC
TGTGAAACCAAGAAATTGATGTCATTGTACAAAAATGTGGTTGACTGGGATGATTCAGCT
GCATTAGAAACTTTCAACGATGCAAAAGCTCGTTTCTGTGCTGTATACCATGGCCAACCT
TGTGATATCCCGTTACCTGACCCAAACATGTATATTGACATGGTTAACCAAGATGAACAT
GTTGATCCTGAATTGGTGGCCGACCTTGAGAAATCGCGGCGTTCTTATCCCAAAAGGGAT
AATACAGCTCCTGATGGCTGGGACTCCTTTATATTTACAAACAAGCCAGTTCCAGCCACA
GGGTGGGGTGATGGGGAAACAAGCAACACACCTGGTCAGCAATACCCTACGAACTGGAAT
AATCACGTGAAACAGCCGACTGAAGCAAATTGCATGCAAAGTTCAGTAAATTGGGATAAT
TATGTCAGCCAGCCTCCTCAAGCAACAGTTCAGCAAAGCTCGGGAAATTGGGACATGTAT
GTTAAACAACAAGATCAAGCTAATAACTGGGAGGCACCAACCATGCCTGGCACCTGGGAC
ATGAAGGGTGACTCTCTGGATGCATGGAAGCGTGATTCCGGCTGGGGTTCTGCAGCTATA
GATTCATGGGACAACCATAGAGAGAACTGTTATGTACCTGACAGCCAGGGCTGGTCTTAC
GGTCACTGGAAAAGGCGAAACAATGAGTCGAGCAGAAGGAATAGCAGGGGTAGAGATAGA
GTTGGTCCCATTAGCTCAAAGGCCATGAAACCAAAGTACCATTCTGAGGAGCGTAATGGT
GCTAATAATGGCTGGAGGCACTGCCGAGTTAGAAATAACATGCAGTACTCCTATGAGAAT
CCTGGTTGCAACCAGTCACTAGCAATGTGAGGAAGTGCATTGGACAGAAAATGAGGACCC
GTGTAGGTTATGTTTCCTTTTTTCTTGAAGTTTTTGTAGATAGTACGAACCACCACAAAC
CTAGAGTGACGATTTTGTCTAGCCATTTGCATGCCCGTTGTACATATCTATATCTATGTA
TATGTTTTTGAGCTCAGTCATTTTTGTTTACTGGCTGTATTGCAGCTTCATTGTTGCAAA
GTGGGAATTAATTAAGATGGTGTCTGTTCAACT