Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0798500-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:33803162:33805386:1 gene:Os01g0798500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CEST description:Similar to predicted protein. (Os01t0798500-01);Malate synthase-like family protein. (Os01t0798500-02)
Sequence	ATGGCGCTGCTCTCACCACCCTCCCCGCCTCCTCCGCTCCCGCCACTTCGCCGCCGCCCC GCCTCTCCCACACTCCTCGCCGTCGCGACGAGACCTAGCTCTCTCCTCTCCCTGCCCCAC TGCCACTGCGGCCTCCCCCTCCCTTCTACAGCCAACGCACGGGCGTATTCCCGTAGCAGC CGCCGCCGCCGCCGCGTAGCTGCCTCGCTCGGCCAGGACGAACCTGGAGTGTCAGACACA GCTGTCGCTCCTGAGGGAGAAGGGGATTCCGAACCGCCGGCTTCCTCCGATGGAGCCGCA GGCGACATCGCGGCTTCCGCCGAGCAGCCGGAGGCGAGCCCCGAGGACTTGGAGGATATC CGCCAGGTCAAAAGGGTGCTTGAGCTTCTTCAGAAGAACAGGGATATGACCTTTGGCGAG GTTAAGCTAACTATCATGATTGAGGATCCTAGAGATATAGAAAGGAAGAGATTACTCGGC ATAGAGGATCCTGATGAAATCACCAGGGATGATTTGGCTGATGCTTTGGTTGAGGTTAAT GAAGGCCGGATTCCAGAAAACCGTGTTGCCCTTCAGTTGCTTGCGAAGGAGATGACTGAA TGGCCAGATCTTGAGATGGAAGCTCCAAAAAAGAAGAGTAAACCTGGGAAATCTGTCTAT GCAAAGGCTACAGATACAGGCATTGATCCTGAGACAGCTGCTAAAAGACTTAACATTGAT TGGGATTCTGCTGCTGATTTGGATGATGAAGAGGAGGAAGATGATGAAACTGAAGTGCCC TCCGCAGTGGGATATTCTGCTCTATATCTGTTAACTGCCTTTCCTGTCATTATTGGAATA TCAGTCGTGTTGATTCTTTTCTACAATTCTCTACAGTAG

Peptide Sequence

PEP ID	Os01t0798500-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:33803162:33805386:1 gene:Os01g0798500 transcript:Os01t0798500-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CEST description:Similar to predicted protein. (Os01t0798500-01);Malate synthase-like family protein. (Os01t0798500-02)
Sequence	MALLSPPSPPPPLPPLRRRPASPTLLAVATRPSSLLSLPHCHCGLPLPSTANARAYSRSS RRRRRVAASLGQDEPGVSDTAVAPEGEGDSEPPASSDGAAGDIAASAEQPEASPEDLEDI RQVKRVLELLQKNRDMTFGEVKLTIMIEDPRDIERKRLLGIEDPDEITRDDLADALVEVN EGRIPENRVALQLLAKEMTEWPDLEMEAPKKKSKPGKSVYAKATDTGIDPETAAKRLNID WDSAADLDDEEEEDDETEVPSAVGYSALYLLTAFPVIIGISVVLILFYNSLQ

Transcript Sequence

Transcript ID	Os01t0798500-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33803162:33805386:1 gene:Os01g0798500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CEST description:Similar to predicted protein. (Os01t0798500-01);Malate synthase-like family protein. (Os01t0798500-02)
Sequence	CCGGACCCAACAAGATAGGGGGGAGCCAAAATGGCGCTGCTCTCACCACCCTCCCCGCCT CCTCCGCTCCCGCCACTTCGCCGCCGCCCCGCCTCTCCCACACTCCTCGCCGTCGCGACG AGACCTAGCTCTCTCCTCTCCCTGCCCCACTGCCACTGCGGCCTCCCCCTCCCTTCTACA GCCAACGCACGGGCGTATTCCCGTAGCAGCCGCCGCCGCCGCCGCGTAGCTGCCTCGCTC GGCCAGGACGAACCTGGAGTGTCAGACACAGCTGTCGCTCCTGAGGGAGAAGGGGATTCC GAACCGCCGGCTTCCTCCGATGGAGCCGCAGGCGACATCGCGGCTTCCGCCGAGCAGCCG GAGGCGAGCCCCGAGGACTTGGAGGATATCCGCCAGGTCAAAAGGGTGCTTGAGCTTCTT CAGAAGAACAGGGATATGACCTTTGGCGAGGTTAAGCTAACTATCATGATTGAGGATCCT AGAGATATAGAAAGGAAGAGATTACTCGGCATAGAGGATCCTGATGAAATCACCAGGGAT GATTTGGCTGATGCTTTGGTTGAGGTTAATGAAGGCCGGATTCCAGAAAACCGTGTTGCC CTTCAGTTGCTTGCGAAGGAGATGACTGAATGGCCAGATCTTGAGATGGAAGCTCCAAAA AAGAAGAGTAAACCTGGGAAATCTGTCTATGCAAAGGCTACAGATACAGGCATTGATCCT GAGACAGCTGCTAAAAGACTTAACATTGATTGGGATTCTGCTGCTGATTTGGATGATGAA GAGGAGGAAGATGATGAAACTGAAGTGCCCTCCGCAGTGGGATATTCTGCTCTATATCTG TTAACTGCCTTTCCTGTCATTATTGGAATATCAGTCGTGTTGATTCTTTTCTACAATTCT CTACAGTAGTTCAGCCCTGCTCATCTTTGCTTCCCGAGGCAGATATCCTCCTCCTTTTAT TTTCTTTTGTAAATCTGAGTCAGCTTAATCTTCATTATTGTGAAGAAATGAAGATGTGAA ATAGTTTCTGTGGTGATATGACAACTGACAAGATAGTAAATCCGTGAAATGCATATTACC AAAATAGAAGGCTTGAAAATAGTTTTTTCCC