Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0794800-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:33659782:33663245:1 gene:Os01g0794800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Subtilase. (Os01t0794800-01);Similar to Subtilase. (Os01t0794800-02)
Sequence

ATGGAATTCCACTATTGTCAGCAACGTTTGGCTTCAGTGCTGCTACTTTGCTTTTGGATG
CTGTTCATCAGAGCGCACGGATCGCGCAAGCTCTACATAACGTATCTAGGTGACAGAAAG
CATGCACACACAGACGATGTTGTTGCTTCCCACCATGATACACTCTCAAGCGTTCTTGGA
AGTAAAGAGGAATCCTTATCTTCCATCATCTATAACTACAAGCATGGATTCTCAGGATTT
GCTGCAATGCTAACAGAAGAGCAAGCAGAACAACTTGCAGAGTTACCAGAAGTAATCAGT
GTGCAGCGAAGCAGGAGGTACAAGACAACGACCACACGGAGCTGGGATTTCCTGGGGCTG
AACTACCAAAACCCCAGTGAATTACTCCGAAGGAGCAACTACGGAGAAGACATAATCATC
GGGGTTGTTGACACCGGGATATGGCCGGAGTCGAGAAGCTTCCGCGACGAAGGGTACGGG
CCGGTGCCGGCACGGTGGAAGGGCGTGTGTCAGGTCGGAGAAGGATGGGGCAGCAACAAC
TGCAGCCGCAAGATCATCGGCGCGCGGTTCTACCACGCCGGGGTGGACGAGGACGACCTC
AAGATCGACTACCTCTCGCCCCGTGACGTGAACGGCCACGGCACGCACACGGCGTCCACC
GCGGCGGGCTCCGTCGTGGAGGCGGTCAGCTTCCACGGGCTGGCCGCGGGCACCGCCCGC
GGCGGCGCGCCCCGGGCGCGCATCGCGGTGTACAAGTCCGTCTGGGGCAGGGGCGGCGCC
GGGTCAGGGAACTCCGCCACCGTGCTTGCCGCCATCGATGACGCGATCCACGACGGCGTG
GACGTGCTGTCGCTGTCCCTGGGTACCCTGGAGAACTCGTTCGGCGCGCTGCACGCCGTC
CAGAAGGGGATCACCGTTGTGTACGCAGCCACGAACTTTGGGCCTGCGCCGCAGGTAGTC
AGGAACACTGCTCCCTGGGTCATCACCGTCGCGGCAAGCAAGATTGACCGGTCGTTCCCG
ACCGTGATCACTCTGGGGGACAAGCGCCAGATTGTGGGACAGTCCATGTACTACTACGAA
GGGAATAACTCATCAGGCAGCAGCTTCAGACTTCTAGCATATGGAGGCCTATGCACCAAG
GATGATCTGAACGGCACGGATGTGAAGGGGAGAATTGTGCTGTGCATCTCCATCGAGATA
TCACCACTTACACTTTTTCCACTAGCATTGAAAACCGTCCTGGGTGCCGGGGCTTCTGGC
CTAATCTTTGCTCAGTACACGACTGATCTCCTGGGCATCACAACGGCCTGCAACGGCACT
GCCTGTGTTCTCGTGGACCTTGAAAGTGCAAATCTGATCGGCTCGTACATCAGCGAAGCA
AGCTCACCAATGGCAAAGATCGAACCGGCACGCACTATCACAGGAGAAGGAGTATTGGCG
CCAAAAGTAGCAGCATTCTCCTCGAGAGGTCCATCGGTTGATTACCCTGATATTATCAAG
CCTGACATAGCTGCACCAGGATCCAACATTTTAGCAGCCATGAAAGATCACTACCAACTT
GGCACAGGAACATCAATGGCAACGCCACATGTAGCAGGTGTTGTCGCGCTGCTGAAAGCC
CTCCATCCAGACTGGTCCCCAGCGGCAATAAAATCGGCCATTGTCACCACGGCATCTGTA
ACTGACGAACGAGGCATGCCAATACTGGCAGAAGGAGTGCCTCGGAAGATTGCTGATCCA
TTTGACTATGGAGGTGGAAACATTAACCCAAACAGGGCAGCTGATCCAGGCCTCATTTAT
GACATCGATCCAAGCGATTATAACAAGTTTTTTGGGTGCATCATCAAGACATCTGTCAGC
TGTAATGCAACAACGCTACCTGGGTATCACCTGAATCTACCATCAATCGCTCTTCCTGAT
CTCAGGAATCCAACCACAGTATCTAGAACAGTGACAAATGTAGGCGAGGTTAATGCAGTT
TACCACGCTGAAATCCAGAGCCCGCCTGGAGTTAAAATGGTTGTTGAGCCATCTGTTCTT
GTCTTTGATGCTGCAAACAAAGTTCATACCTTCAAGGTTAGTTTTTCACCTCTATGGAAA
TTGCAAGGGGACTATACATTTGGCAGCCTTACTTGGCACAATGAAAAGAAGTCGGTGAGA
ATTCCAATAGCAGTCCGGATTACCATTCAAGATTTCTATGCAGATGTTGCATAA

Peptide Sequence

PEP ID

Os01t0794800-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:33659782:33663245:1 gene:Os01g0794800 transcript:Os01t0794800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Subtilase. (Os01t0794800-01);Similar to Subtilase. (Os01t0794800-02)
Sequence

MEFHYCQQRLASVLLLCFWMLFIRAHGSRKLYITYLGDRKHAHTDDVVASHHDTLSSVLG
SKEESLSSIIYNYKHGFSGFAAMLTEEQAEQLAELPEVISVQRSRRYKTTTTRSWDFLGL
NYQNPSELLRRSNYGEDIIIGVVDTGIWPESRSFRDEGYGPVPARWKGVCQVGEGWGSNN
CSRKIIGARFYHAGVDEDDLKIDYLSPRDVNGHGTHTASTAAGSVVEAVSFHGLAAGTAR
GGAPRARIAVYKSVWGRGGAGSGNSATVLAAIDDAIHDGVDVLSLSLGTLENSFGALHAV
QKGITVVYAATNFGPAPQVVRNTAPWVITVAASKIDRSFPTVITLGDKRQIVGQSMYYYE
GNNSSGSSFRLLAYGGLCTKDDLNGTDVKGRIVLCISIEISPLTLFPLALKTVLGAGASG
LIFAQYTTDLLGITTACNGTACVLVDLESANLIGSYISEASSPMAKIEPARTITGEGVLA
PKVAAFSSRGPSVDYPDIIKPDIAAPGSNILAAMKDHYQLGTGTSMATPHVAGVVALLKA
LHPDWSPAAIKSAIVTTASVTDERGMPILAEGVPRKIADPFDYGGGNINPNRAADPGLIY
DIDPSDYNKFFGCIIKTSVSCNATTLPGYHLNLPSIALPDLRNPTTVSRTVTNVGEVNAV
YHAEIQSPPGVKMVVEPSVLVFDAANKVHTFKVSFSPLWKLQGDYTFGSLTWHNEKKSVR
IPIAVRITIQDFYADVA

Transcript Sequence

Transcript ID

Os01t0794800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33659782:33663245:1 gene:Os01g0794800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Subtilase. (Os01t0794800-01);Similar to Subtilase. (Os01t0794800-02)
Sequence

ACACAACGAAGAAAAATGGAATTCCACTATTGTCAGCAACGTTTGGCTTCAGTGCTGCTA
CTTTGCTTTTGGATGCTGTTCATCAGAGCGCACGGATCGCGCAAGCTCTACATAACGTAT
CTAGGTGACAGAAAGCATGCACACACAGACGATGTTGTTGCTTCCCACCATGATACACTC
TCAAGCGTTCTTGGAAGTAAAGAGGAATCCTTATCTTCCATCATCTATAACTACAAGCAT
GGATTCTCAGGATTTGCTGCAATGCTAACAGAAGAGCAAGCAGAACAACTTGCAGAGTTA
CCAGAAGTAATCAGTGTGCAGCGAAGCAGGAGGTACAAGACAACGACCACACGGAGCTGG
GATTTCCTGGGGCTGAACTACCAAAACCCCAGTGAATTACTCCGAAGGAGCAACTACGGA
GAAGACATAATCATCGGGGTTGTTGACACCGGGATATGGCCGGAGTCGAGAAGCTTCCGC
GACGAAGGGTACGGGCCGGTGCCGGCACGGTGGAAGGGCGTGTGTCAGGTCGGAGAAGGA
TGGGGCAGCAACAACTGCAGCCGCAAGATCATCGGCGCGCGGTTCTACCACGCCGGGGTG
GACGAGGACGACCTCAAGATCGACTACCTCTCGCCCCGTGACGTGAACGGCCACGGCACG
CACACGGCGTCCACCGCGGCGGGCTCCGTCGTGGAGGCGGTCAGCTTCCACGGGCTGGCC
GCGGGCACCGCCCGCGGCGGCGCGCCCCGGGCGCGCATCGCGGTGTACAAGTCCGTCTGG
GGCAGGGGCGGCGCCGGGTCAGGGAACTCCGCCACCGTGCTTGCCGCCATCGATGACGCG
ATCCACGACGGCGTGGACGTGCTGTCGCTGTCCCTGGGTACCCTGGAGAACTCGTTCGGC
GCGCTGCACGCCGTCCAGAAGGGGATCACCGTTGTGTACGCAGCCACGAACTTTGGGCCT
GCGCCGCAGGTAGTCAGGAACACTGCTCCCTGGGTCATCACCGTCGCGGCAAGCAAGATT
GACCGGTCGTTCCCGACCGTGATCACTCTGGGGGACAAGCGCCAGATTGTGGGACAGTCC
ATGTACTACTACGAAGGGAATAACTCATCAGGCAGCAGCTTCAGACTTCTAGCATATGGA
GGCCTATGCACCAAGGATGATCTGAACGGCACGGATGTGAAGGGGAGAATTGTGCTGTGC
ATCTCCATCGAGATATCACCACTTACACTTTTTCCACTAGCATTGAAAACCGTCCTGGGT
GCCGGGGCTTCTGGCCTAATCTTTGCTCAGTACACGACTGATCTCCTGGGCATCACAACG
GCCTGCAACGGCACTGCCTGTGTTCTCGTGGACCTTGAAAGTGCAAATCTGATCGGCTCG
TACATCAGCGAAGCAAGCTCACCAATGGCAAAGATCGAACCGGCACGCACTATCACAGGA
GAAGGAGTATTGGCGCCAAAAGTAGCAGCATTCTCCTCGAGAGGTCCATCGGTTGATTAC
CCTGATATTATCAAGCCTGACATAGCTGCACCAGGATCCAACATTTTAGCAGCCATGAAA
GATCACTACCAACTTGGCACAGGAACATCAATGGCAACGCCACATGTAGCAGGTGTTGTC
GCGCTGCTGAAAGCCCTCCATCCAGACTGGTCCCCAGCGGCAATAAAATCGGCCATTGTC
ACCACGGCATCTGTAACTGACGAACGAGGCATGCCAATACTGGCAGAAGGAGTGCCTCGG
AAGATTGCTGATCCATTTGACTATGGAGGTGGAAACATTAACCCAAACAGGGCAGCTGAT
CCAGGCCTCATTTATGACATCGATCCAAGCGATTATAACAAGTTTTTTGGGTGCATCATC
AAGACATCTGTCAGCTGTAATGCAACAACGCTACCTGGGTATCACCTGAATCTACCATCA
ATCGCTCTTCCTGATCTCAGGAATCCAACCACAGTATCTAGAACAGTGACAAATGTAGGC
GAGGTTAATGCAGTTTACCACGCTGAAATCCAGAGCCCGCCTGGAGTTAAAATGGTTGTT
GAGCCATCTGTTCTTGTCTTTGATGCTGCAAACAAAGTTCATACCTTCAAGGTTAGTTTT
TCACCTCTATGGAAATTGCAAGGGGACTATACATTTGGCAGCCTTACTTGGCACAATGAA
AAGAAGTCGGTGAGAATTCCAATAGCAGTCCGGATTACCATTCAAGATTTCTATGCAGAT
GTTGCATAACCTGGGTCCAGGGTGAAACATGCAGGAAATAACACAGCGCTCATAGAAACA
ATAGAGTCTACAGGAGATACCAATTTCCACAGAACTACAGAAGTATTGGTTTTGTGTATT
TCTTTATTACCAGAATACAAAAATGTTCAGGTCTATGTTTGCCAACTTTTGAAATATCAT
GTACCTGCCCCTCCCACCTAACGCAGCATGACAATGACTACAGATAGTTTCAGTTTTGGT
TT