Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0793500-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33609424:33614332:-1 gene:Os01g0793500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os01t0793500-01)
Sequence	ATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCTCCTC GCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGTCCTC CCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCGCCTC GCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCCAGGT GATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGCGTGG ATGGAGTTCCACAACGGGACTGATGGGGGCCTTGGAGGTGGTACGCTCCATCTCGAGACA AACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCGTGTT ACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGAAAGC GAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATCTGGA ACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCAATGG GGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGAACGT CCGAAACCTTGGGTGTCAGAATTAAATGTTGACGATATCCACTCTGGAGATTTTTTGGTT TTATCAAAAATTCGTGGGCGCTGGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTACTGGA GCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGAAAGCTTTGGGTTGGG GAATCTGGTCATGAGAATGAACAGGGAGAAGATATTATTGCTATCTTGCCATGGGAAGAA TGGTGGGACTTTGAAGTAAAAAAGGATGATTCCAATCCTCAGATTGCATTACTACCTTTG CATCCAGATTTGCGTGCAAAATTTAATGAGACAGCAGCTTGGGAATATGCAAAAAGCATG GATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAGCGAC AACTATCCACCGCCATTAGATGCTCATGTGGTTGCCTCTGTGATGACTATGTGGAACAAA CTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGGAACT AAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATTTGAC AAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGCTTCT TGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGCCAGC TCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCCTCAACTTTTTTGAGAAC AATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTTCTGC CAAATAAAGGGCAGGTATCGAATGGAGTTGCCTGGATACAACACCATGCAGCCGTACCCT CACATGAATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTGCTGA

Peptide Sequence

PEP ID	Os01t0793500-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33609424:33614332:-1 gene:Os01g0793500 transcript:Os01t0793500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os01t0793500-01)
Sequence	MGGAYNLKLLAALSALVLLLAASRPFLPGLLEAALRAPVLPRDLLPLLPWPVAQPLLRRL ALRGAADLLPSFVGVAREPGDGGARAAEWKGACFYDNRAWMEFHNGTDGGLGGGTLHLET NKAHSWTCIDLYVFATPYRVTWDYYFVGREHTLDFKEWESEAEYEYVKRKGVSIFLMPSG TIGTLRALWDVFPLFTNTQWGENSNLAFLKKHMGATFEERPKPWVSELNVDDIHSGDFLV LSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGKLWVGESGHENEQGEDIIAILPWEE WWDFEVKKDDSNPQIALLPLHPDLRAKFNETAAWEYAKSMDGKPYGYHNMIFSWIDTISD NYPPPLDAHVVASVMTMWNKLQPEYAANMWKEALNKRLGTKGLDLPEIIVESEKRGMTFD KLLTVPEQDKWVYTDGQSASCVAYVLMMYKEAGLFDPIASSIEVTEFTIKDAYSLNFFEN NMTRLPVWCNKDDSVKLPFCQIKGRYRMELPGYNTMQPYPHMNERCPSLPPNYNRPRNC

Transcript Sequence

Transcript ID	Os01t0793500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33609424:33614332:-1 gene:Os01g0793500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to mRNA, clone: RTFL01-05-M08. (Os01t0793500-01)
Sequence	AGCGCGGGGCAACGCGAAACTCGCGGAGGGCTCCCAGACCTAACCGGCGGCGGTGGCGGC GGCCATGGGAGGAGCCTACAACCTCAAGCTCCTCGCCGCCCTCTCCGCGCTCGTCCTCCT CCTCGCCGCCTCGCGCCCCTTCCTCCCGGGGCTCCTGGAGGCGGCCCTCCGCGCCCCCGT CCTCCCGCGCGACCTCCTCCCTCTCCTGCCCTGGCCGGTGGCCCAGCCGCTGCTCCGCCG CCTCGCGCTGCGCGGCGCCGCCGACCTCCTCCCGTCCTTCGTCGGCGTCGCGCGGGAGCC AGGTGATGGCGGCGCCCGCGCCGCCGAGTGGAAGGGCGCCTGCTTCTACGATAACCGGGC GTGGATGGAGTTCCACAACGGGACTGATGGGGGCCTTGGAGGTGGTACGCTCCATCTCGA GACAAACAAAGCTCATAGCTGGACTTGCATAGACCTTTATGTGTTTGCAACACCATATCG TGTTACATGGGATTACTACTTTGTAGGTCGTGAGCATACCCTTGATTTCAAAGAATGGGA AAGCGAGGCTGAATATGAATATGTAAAACGCAAAGGAGTATCCATATTCCTGATGCCATC TGGAACAATTGGAACACTTAGAGCACTTTGGGATGTTTTCCCCCTGTTTACAAATACTCA ATGGGGTGAGAATTCAAATCTTGCATTTCTAAAGAAGCATATGGGTGCAACCTTCGAGGA ACGTCCGAAACCTTGGGTGTCAGAATTAAATGTTGACGATATCCACTCTGGAGATTTTTT GGTTTTATCAAAAATTCGTGGGCGCTGGGGTGGTTTTGAAACCCTAGAGAAGTGGGTTAC TGGAGCTTATGCTGGCCATACCGCAGTTTGCCTCAGGGATTCTGAAGGAAAGCTTTGGGT TGGGGAATCTGGTCATGAGAATGAACAGGGAGAAGATATTATTGCTATCTTGCCATGGGA AGAATGGTGGGACTTTGAAGTAAAAAAGGATGATTCCAATCCTCAGATTGCATTACTACC TTTGCATCCAGATTTGCGTGCAAAATTTAATGAGACAGCAGCTTGGGAATATGCAAAAAG CATGGATGGAAAACCTTATGGGTACCACAATATGATTTTTAGTTGGATTGATACCATAAG CGACAACTATCCACCGCCATTAGATGCTCATGTGGTTGCCTCTGTGATGACTATGTGGAA CAAACTTCAACCAGAGTATGCTGCCAACATGTGGAAAGAAGCCCTTAACAAACGGCTTGG AACTAAGGGTCTTGATCTACCTGAAATCATAGTGGAATCAGAGAAGCGTGGGATGACATT TGACAAATTGCTAACAGTTCCTGAGCAAGATAAGTGGGTCTATACTGATGGCCAGTCTGC TTCTTGTGTGGCTTACGTCCTTATGATGTACAAGGAGGCTGGACTCTTTGACCCAATTGC CAGCTCTATAGAAGTTACTGAATTCACCATAAAAGATGCTTACAGCCTCAACTTTTTTGA GAACAATATGACACGGCTTCCCGTGTGGTGCAACAAAGATGACAGTGTCAAGCTCCCCTT CTGCCAAATAAAGGGCAGGTATCGAATGGAGTTGCCTGGATACAACACCATGCAGCCGTA CCCTCACATGAATGAAAGGTGTCCTTCTCTGCCTCCGAATTATAACAGACCGCGAAATTG CTGATCTGTTACACATTATTACGCCTTGCATTTTGATATATGCTGGCTTTTAGTCTGTAC TTTAGCTGTACATATCACTGTAGTCTGTAGGTATGCAATTGTTTTCTTTGTTGTTACTAC GAAGCAACTTCCGCAAATAAGGAAGATTATGATTGCGTGAATGTACAGTAAATCTCTACC CTTGATGCTACAGGTGTTACACTGCTGTAGGGTTCACATAACTTTCGTCATATAGTAATT GACAAATACATGT