Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0789200-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33494608:33496692:1 gene:Os01g0789200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 45 description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os01t0789200-01)
Sequence	ATGGACCTGTTGACATCGGCGATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGC GGCCGCACCTGTCGCTGCTCGTCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAG GAGGAAGCGTCGACTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAG AGGTTCTGGAGGAAGAAGAAGAAGAAGGCCAAGAAGGATCACTACGGCGACGCCGCCGCC ACCGAGCACGGCAGCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGAC CTCGTGAACGACATATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATT CTACGGATCACCCACCAGAACATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAAC GCCACCGACTCCTTCAGCCCGAACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTAC AGAGGCCACCTCGAAGAGATCAACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGG TTCCAGGGGAACCGCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCC AACCTCGTCAAGCTGCTCGGCTACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAG TGCATGCGGAACGGCTCGCTGGAGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCT CTCCCGTGGCAAACGCGGATGAAGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTG CACGAGGTGGCCAACCCGCCGGTGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTG GACGAGGACTTCAACTCCAAGCTGTCCGACTTCGGCCTCGCCAAGCTCGGCCCCGTCGGC GACAAGAGCCACGTCAGCACGCGGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTAC GCCATGACCGGCAAGCTCACCAAGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTG GAGATCATCACCGGCAGGCGGGCGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTC GTCCAATGGGCGGCACCTCTCGTCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCG TTGCTGGAAGAGAAATTCCCCCTCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATG TGCTTGCAGGAGGATGCCAGCAACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCG TTTCTTGCCGAGCAGAAGTATCATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGC AGAGACAGGGACTGTAGCAATCCTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCA GATGATGAAATCAAGCACAGGTGA

Peptide Sequence

PEP ID	Os01t0789200-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33494608:33496692:1 gene:Os01g0789200 transcript:Os01t0789200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 45 description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os01t0789200-01)
Sequence	MDLLTSAMKRCCNGKTLLRGGRTCRCSSASAIGSSGVRGKEEASTSAADSEPDKKRWRKK RFWRKKKKKAKKDHYGDAAATEHGSERASCRRYENDAVADLVNDISSKSDVCNVYAAEGI LRITHQNIPSMVLTYRQLCNATDSFSPNNLLGEGGFGRVYRGHLEEINEIVAVKQLDKDG FQGNREFLVEVLMLSLLHHPNLVKLLGYCTDMDQRILVYECMRNGSLEDHLLDLPPKAKP LPWQTRMKIAVGAAKGIEYLHEVANPPVIYRDLKTSNILLDEDFNSKLSDFGLAKLGPVG DKSHVSTRVMGTYGYCAPEYAMTGKLTKTSDIYSFGVVLLEIITGRRAIDTSRPTHEQVL VQWAAPLVKDKKRFVRLADPLLEEKFPLKGLYQALAIASMCLQEDASNRPMISDVVAALS FLAEQKYHPQDGPDQAARKSRDRDCSNPPRKTDMVSEIKADDEIKHR

Transcript Sequence

Transcript ID	Os01t0789200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33494608:33496692:1 gene:Os01g0789200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 45 description:Similar to Serine/threonine-protein kinase PBS1 (EC 2.7.1.37) (AvrPphB susceptible protein 1). (Os01t0789200-01)
Sequence	GCGGATCGGCTCGAGGGTGTTTCCCCACTCTCGCGTCGATTCGCGCGATGGACCTGTTGA CATCGGCGATGAAGAGATGCTGCAACGGCAAGACGCTCCTCCGCGGCGGCCGCACCTGTC GCTGCTCGTCCGCCAGCGCCATTGGATCTTCCGGTGTCCGTGGCAAGGAGGAAGCGTCGA CTTCGGCGGCGGACTCCGAGCCGGATAAGAAGAGGTGGAGGAAGAAGAGGTTCTGGAGGA AGAAGAAGAAGAAGGCCAAGAAGGATCACTACGGCGACGCCGCCGCCACCGAGCACGGCA GCGAGCGCGCCAGCTGCAGGCGCTACGAGAACGACGCCGTGGCCGACCTCGTGAACGACA TATCGTCCAAGTCAGATGTCTGCAACGTGTACGCAGCCGAGGGGATTCTACGGATCACCC ACCAGAACATCCCCAGCATGGTGCTCACGTACAGGCAGCTATGCAACGCCACCGACTCCT TCAGCCCGAACAACCTGCTCGGGGAAGGCGGCTTTGGGAGGGTGTACAGAGGCCACCTCG AAGAGATCAACGAGATCGTCGCCGTCAAGCAGCTGGACAAGGACGGGTTCCAGGGGAACC GCGAGTTCCTGGTGGAGGTGCTGATGCTCAGTCTCCTGCACCACCCCAACCTCGTCAAGC TGCTCGGCTACTGCACCGACATGGACCAGAGAATCCTCGTCTACGAGTGCATGCGGAACG GCTCGCTGGAGGATCATCTCCTAGATCTCCCTCCAAAGGCAAAGCCTCTCCCGTGGCAAA CGCGGATGAAGATCGCGGTGGGCGCGGCGAAGGGCATCGAGTACCTGCACGAGGTGGCCA ACCCGCCGGTGATCTACCGCGACCTCAAGACGTCCAACATCCTCCTGGACGAGGACTTCA ACTCCAAGCTGTCCGACTTCGGCCTCGCCAAGCTCGGCCCCGTCGGCGACAAGAGCCACG TCAGCACGCGGGTCATGGGCACGTACGGCTACTGCGCCCCCGAGTACGCCATGACCGGCA AGCTCACCAAGACGTCGGACATCTACAGCTTCGGCGTCGTGCTGCTGGAGATCATCACCG GCAGGCGGGCGATCGATACCTCCAGGCCGACGCACGAGCAGGTTCTCGTCCAATGGGCGG CACCTCTCGTCAAGGACAAGAAGAGATTCGTGAGACTGGCTGACCCGTTGCTGGAAGAGA AATTCCCCCTCAAGGGGCTTTACCAAGCTCTCGCGATCGCCTCCATGTGCTTGCAGGAGG ATGCCAGCAACAGGCCGATGATCAGCGACGTCGTCGCGGCGCTCTCGTTTCTTGCCGAGC AGAAGTATCATCCCCAAGATGGCCCGGATCAGGCCGCCCGGAAGAGCAGAGACAGGGACT GTAGCAATCCTCCCAGGAAGACAGACATGGTTTCTGAGATCAAGGCAGATGATGAAATCA AGCACAGGTGACCATAGAGGAGTAACAGCCTAGCAGGGAAGGGAGGAGCTGCAGGACTGT CTGCTCTCTTGAATTTCTTGTGTAATGTACACCACCTAGGCAGGATGTAACAGCAACAAG TCGATGTTGACTGGTACTTGGTCTGTTCGTCAGGATTCATTACCAGGTTATTGGAGCTCG CAGGACTGTCTGCTCTCTTGCAGTCCCAAGTTATTGGAGCTAACTATAGATACGATGAGA ATGACAAGAATGATGACATTACCATAAGCCAGTTATATCG