Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0788900-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:33479023:33480924:-1 gene:Os01g0788900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0788900-01);Similar to predicted protein. (Os01t0788900-02)
Sequence	AGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCGCC GCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGCGC CGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACACG GGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGGAG AAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTCTT GGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCATG TCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATGCT TGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGATTC GGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTGAG TCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATGCA TTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCAGG GAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGGCA GTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGAAC AAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTGTA TACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGCTT GTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTATT GATGCTTCTATGACAGCCCATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGAGA GAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAGAG AACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGATA GAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGTTG GAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATCAG ACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTATA CTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCATTT CTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAGCA CAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCCAC AAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGATT GCATTTAAGAATTGGGCTGGTCTCAATGCATGA

Peptide Sequence

PEP ID	Os01t0788900-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:33479023:33480924:-1 gene:Os01g0788900 transcript:Os01t0788900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0788900-01);Similar to predicted protein. (Os01t0788900-02)
Sequence	SPHADPVPEAALQAVFTSLAAAASAAPALALVRALLRCGRRLPAFPVWGSPLIELTRADT GAFVAFLKVFDEACKQMVSEKSPSAAAAMRPDLAACNAVLGGCCRLLGSVTEAERVLEIM SAIAVSPDVDSFGCLAFLYAWRDIPSRVDELDKLLDALGFGKKIFFKNLISGYLKSCSFE SVSSVILRVVEERRVGGSNAFDLESYTEVAQRFVDNGRIRELAQLIIKAQETESLQQSLA VEDSVGFGIVNACVELGLLNKAHSILDEMTAQGASVGLGVYSSILKAYCKEQRTAEAAQL VSEISAAGLQLDAGSYDALIDASMTAHDFLSAFSLFKEMREARLPDLRTSYLTIMTGLTE NNRPELMASFLDTVVDDPRIEIATHDWNSIIHAFCKVGRLEDARRTYRRMVFLRYEPNNQ TYLSLINGYVSAEKYFSVLILWTEVRRKGADFNHELIDAFLYALVKGGFFDMAMQVIEKA QELKIFLDKWRHKQAFMETHKKLKVAKLRKRNFRKMEALIAFKNWAGLNA

Transcript Sequence

Transcript ID	Os01t0788900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33479023:33480924:-1 gene:Os01g0788900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0788900-01);Similar to predicted protein. (Os01t0788900-02)
Sequence	AGAGCCCCCACGCGGACCCCGTCCCGGAGGCCGCCCTGCAGGCCGTCTTCACTTCGCTCG CCGCAGCGGCCTCCGCCGCTCCGGCCTTGGCCCTCGTGCGCGCTCTGCTGCGCTGCGGGC GCCGCCTCCCGGCTTTCCCTGTCTGGGGCTCCCCGCTTATAGAGCTCACGCGCGCTGACA CGGGCGCCTTCGTGGCCTTCTTGAAGGTCTTCGACGAAGCCTGCAAGCAAATGGTGTCGG AGAAGTCCCCCTCTGCGGCAGCGGCGATGCGTCCTGACCTTGCTGCCTGCAATGCCGTTC TTGGTGGCTGCTGCCGTCTGCTCGGTTCAGTCACAGAAGCTGAGAGGGTATTGGAGATCA TGTCGGCTATTGCAGTGTCGCCGGATGTGGATAGCTTCGGATGTCTTGCGTTCTTGTATG CTTGGAGAGATATTCCAAGCCGTGTTGATGAGCTCGATAAATTGCTGGATGCGTTAGGAT TCGGCAAGAAGATTTTTTTCAAGAATTTGATCAGTGGGTATTTGAAGAGCTGCAGCTTTG AGTCAGTTTCATCAGTCATTCTTCGTGTGGTGGAGGAGAGAAGAGTTGGGGGTAGCAATG CATTTGATTTAGAAAGCTATACAGAGGTTGCACAGCGTTTTGTAGATAATGGGAGGATCA GGGAATTAGCTCAGTTGATCATCAAAGCACAGGAAACTGAGTCATTGCAGCAGTCACTGG CAGTTGAGGATTCTGTTGGGTTTGGGATTGTCAATGCTTGTGTTGAGCTTGGCCTATTGA ACAAGGCTCATAGTATACTCGACGAAATGACTGCTCAAGGAGCCTCTGTGGGGCTAGGTG TATACTCCTCAATCCTGAAAGCGTATTGCAAGGAGCAAAGGACTGCAGAGGCTGCACAGC TTGTCTCAGAGATTAGTGCAGCAGGGCTGCAGCTTGATGCTGGCAGTTATGATGCTCTTA TTGATGCTTCTATGACAGCCCATGATTTCCTATCTGCATTCTCTCTCTTCAAGGAGATGA GAGAGGCGAGGTTACCAGACCTTAGGACAAGCTATCTTACTATAATGACAGGCTTAACAG AGAACAACCGTCCTGAGCTTATGGCATCATTCTTGGACACAGTCGTCGATGATCCGAGGA TAGAAATTGCAACACATGATTGGAACTCAATAATACATGCCTTTTGCAAGGTTGGGAGGT TGGAGGATGCTCGAAGGACATACCGAAGGATGGTATTCCTGAGGTATGAACCAAATAATC AGACCTACCTTTCGCTAATCAATGGGTATGTCTCAGCGGAGAAGTACTTTAGTGTGCTTA TACTATGGACTGAAGTGAGGAGGAAGGGGGCTGATTTCAACCATGAGTTAATTGATGCAT TTCTGTATGCTTTAGTCAAAGGTGGATTTTTTGATATGGCAATGCAAGTGATTGAGAAAG CACAAGAGTTGAAAATATTTTTGGATAAGTGGAGACACAAACAAGCATTCATGGAGACCC ACAAAAAACTGAAAGTGGCAAAGCTGAGAAAGCGGAATTTCAGGAAAATGGAAGCTCTGA TTGCATTTAAGAATTGGGCTGGTCTCAATGCATGACATTATAATCTTTTTATCAGTCTAT CATGACTGATTTTAATGGCACGTATCTGAGATGGCATCCCATAGTCCTCTTGGAAGTAAC AAGCAGCGGACCTTCAGAGATGAACAAGTGAGGGGTTTTGTCATCATGTCAAATTTTGAT AAGGTTAGGAAGGCCGGTGCGCTTTCGGTTTCTTCTTTTACTTAAAGTAATACATGTTTA ACTATATAGGCTGACCTGTCTCTGTACTAGTTCTAGTCATTTACGCTGATGTAATCTCCA AACCATGAAAATCTTAAATGAGCTAATATCATGTTTATCCTG