Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0788800-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33474895:33478422:1 gene:Os01g0788800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRANSCRIPTION FACTOR 1 description:Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-01);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-02);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-03)
Sequence	ATGAACAGGTTTTTCAGCATCTGTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGT GAGACAACAGGTCTTGGTTTAGATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAA GTAAAGACTATGTGCTGGAAGGAAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTG AGGGATGAGAACAGGAGAGTTAAGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGT AATTCATCAGTACAGAACCAGCTTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAG TGGCTGCAACAAGAGATTGCACGGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTT CAACTTAATTCATCAGCAGACTATGTATTTTCAGGGCAACATGACCAACAAATGATTGCT GAACTAGCCAAAAACGCAATGCACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTA TGGTTTCCCGTCCCTGGCTGTTCTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCA TATCCTGGGGATAACAGTGCAAACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTT TCTATGGTGATGATGGACTACAAAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTAC CGAACTTTCTTTCCTGAAGTTATTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCT ACCAGTGATGGTTATAATGGGGTTATACAACTGATGACTGTCGAGATGATGTTCCCATCG CCCCTGGTACCGGCTAGGAAATGCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGA TTAGTGGTCGTCATTGATGTGTCATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAA ATGCCATCAGGGTTTCTGATCCAATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATA GAGCACGTCCTTGCGGATGACACCGGTGTTCATGAGCTCTACCAGCCTTGTATGAATGGA CTCGTCTTCGGAGCTCGGCGCTGGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGA GATGTTCATCACAACAAGACAGCTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATG AAGCTAGCGGACGACCTGCTCGCGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGA ACGTGGACCGTCGTGATCGGCGCCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGG ACCACCGAGGGCAGCAGCAGCTACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTG CCGCTGCCCATGAGGAAAACCTTCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGG GACGTCCTGGTGCACGGCAGCGTGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGG AACGACGACACTGTCACCGTCCTCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGG ACCATGATCCTGCAGAACAACGGGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAG ATCGACAGCGAGCTGATGAACACCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGG GGCGGGCCGTCCCTCTACCCCACCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAG GACAGCAGCGGCATCGCCCTCGGCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAG ATTCCGGTGAAGCTCGCCAGTGGGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATC AGGCTCATGACTGACACCATTGCCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGT ATCTACGGGGTTAGCCCGTTCCACCCCTAG

Peptide Sequence

PEP ID	Os01t0788800-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33474895:33478422:1 gene:Os01g0788800 transcript:Os01t0788800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRANSCRIPTION FACTOR 1 description:Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-01);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-02);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-03)
Sequence	MNRFFSICGHPDDGQKRHLSETTGLGLDQVKFWFQNKRTQVKTMCWKEENYKLSVENEIL RDENRRVKIAHCTAVCLTCCNSSVQNQLAVEMERLMGQSEWLQQEIARSNGTPPAANLAF QLNSSADYVFSGQHDQQMIAELAKNAMHALIILAESHVALWFPVPGCSYEVLNKMAYDQA YPGDNSANAIGFKTEATRAVSMVMMDYKSVVDFLMDPYNYRTFFPEVISGAVTNRIYTWP TSDGYNGVIQLMTVEMMFPSPLVPARKCTFLRYCNVLNEGLVVVIDVSLDDGSIFSKCRK MPSGFLIQSIRPNSCKVTAIEHVLADDTGVHELYQPCMNGLVFGARRWVATMARQSARMR DVHHNKTAPQVSTKGRKNLMKLADDLLASFAGGIAATGGGTWTVVIGAGTEKDIRVAYRR TTEGSSSYNAILSVTASLRLPLPMRKTFDLLRNLTHRCKWDVLVHGSVVKEEVTIARGVG NDDTVTVLHCKRAGREDRGRTMILQNNGYDASGSFMVYSQIDSELMNTMVLSPSDLPPGR GGPSLYPTGFSLLPDVEAAQDSSGIALGEVGGTLMTMGFQIPVKLASGDRMYSRSAASAI RLMTDTIALVKKTLMNEHSGIYGVSPFHP

Transcript Sequence

Transcript ID	Os01t0788800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33474895:33478422:1 gene:Os01g0788800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TRANSCRIPTION FACTOR 1 description:Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-01);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-02);Similar to Isoform 2 of Homeobox-leucine zipper protein TF1. (Os01t0788800-03)
Sequence	AGGTGTTTAGTGAGAATTAGCTTTATAAAAATGTTTAGTGGGTATTAGCTTTATAAAAAG AAAGGATTCTATCCTGGTTAAATATATTGTGTATGTTGCAGTATGGTACTCCTTTCTGAG GAGAATTTCATCATGTGGGTTATCTTCATTTTTCTTGGATGAACAGGTTTTTCAGCATCT GTGGGCATCCCGATGATGGACAAAAGAGGCATCTGAGTGAGACAACAGGTCTTGGTTTAG ATCAAGTGAAGTTTTGGTTTCAGAATAAAAGAACACAAGTAAAGACTATGTGCTGGAAGG AAGAGAACTATAAGTTGTCGGTGGAGAATGAAATTCTGAGGGATGAGAACAGGAGAGTTA AGATAGCTCACTGCACTGCTGTATGCCTCACTTGCTGTAATTCATCAGTACAGAACCAGC TTGCCGTTGAGATGGAAAGGTTAATGGGGCAGAGTGAGTGGCTGCAACAAGAGATTGCAC GGTCGAATGGAACACCCCCGGCTGCAAACCTTGCCTTTCAACTTAATTCATCAGCAGACT ATGTATTTTCAGGGCAACATGACCAACAAATGATTGCTGAACTAGCCAAAAACGCAATGC ACGCATTGATTATTTTGGCCGAATCCCATGTCGCTCTATGGTTTCCCGTCCCTGGCTGTT CTTATGAAGTATTGAACAAGATGGCTTATGACCAAGCATATCCTGGGGATAACAGTGCAA ACGCCATTGGATTCAAGACAGAGGCTACTCGTGCAGTTTCTATGGTGATGATGGACTACA AAAGCGTTGTGGATTTCCTCATGGATCCTTACAACTACCGAACTTTCTTTCCTGAAGTTA TTTCCGGGGCAGTAACCAACAGGATCTACACGTGGCCTACCAGTGATGGTTATAATGGGG TTATACAACTGATGACTGTCGAGATGATGTTCCCATCGCCCCTGGTACCGGCTAGGAAAT GCACATTCCTGCGCTATTGTAATGTGCTGAACGAAGGATTAGTGGTCGTCATTGATGTGT CATTGGACGATGGCAGTATCTTCTCCAAATGCCGTAAAATGCCATCAGGGTTTCTGATCC AATCCATAAGGCCAAACAGCTGCAAGGTCACTGCCATAGAGCACGTCCTTGCGGATGACA CCGGTGTTCATGAGCTCTACCAGCCTTGTATGAATGGACTCGTCTTCGGAGCTCGGCGCT GGGTGGCGACCATGGCGCGGCAGTCTGCACGCATGAGAGATGTTCATCACAACAAGACAG CTCCGCAAGTCAGCACGAAGGGGAGGAAGAATCTAATGAAGCTAGCGGACGACCTGCTCG CGAGCTTCGCCGGCGGCATCGCCGCCACTGGCGGAGGAACGTGGACCGTCGTGATCGGCG CCGGCACGGAGAAGGACATCAGGGTCGCGTACAGGAGGACCACCGAGGGCAGCAGCAGCT ACAACGCGATCCTGTCCGTCACCGCGTCCCTGCGTCTGCCGCTGCCCATGAGGAAAACCT TCGATCTGCTCAGGAACCTTACTCACCGCTGCAAGTGGGACGTCCTGGTGCACGGCAGCG TGGTGAAGGAGGAGGTCACCATCGCCAGAGGCGTCGGGAACGACGACACTGTCACCGTCC TCCACTGCAAGCGCGCCGGCAGGGAGGACAGGGGAAGGACCATGATCCTGCAGAACAACG GGTACGACGCGTCGGGCTCGTTCATGGTCTACTCCCAGATCGACAGCGAGCTGATGAACA CCATGGTCCTGAGCCCCAGCGACCTGCCGCCCGGGCGGGGCGGGCCGTCCCTCTACCCCA CCGGCTTCTCCCTTCTCCCTGACGTCGAGGCTGCCCAGGACAGCAGCGGCATCGCCCTCG GCGAGGTTGGGGGAACTCTCATGACCATGGGCTTCCAGATTCCGGTGAAGCTCGCCAGTG GGGATCGCATGTATTCCCGGTCTGCGGCATCGGCAATCAGGCTCATGACTGACACCATTG CCCTCGTCAAGAAGACGCTGATGAACGAGCATTCTGGTATCTACGGGGTTAGCCCGTTCC ACCCCTAGATTCAGAAAAACACCAGAGGGAGAAAAGGGAGGTCCGTGTGCAGATAAAAAT CAAGAACATGCGAAGGGGATTCATCGGCTCCGATCACCCTGCATCTCCCAGAATTTGCTG AATTAATTAGAACTTTAAGGTTGTGTTAACAACCTGTAATAATGTTTTTAAGGCCAAACT TATATCGTGTCTTTGCTGTAATAATGTAGTATGCGCCTGATGGATGTCGACTGCCGTGTA CCGATGCAGTTTGCTTCGCAGAGACGCGGATACATTTGCTATCGTATGGATGCTCCTTTA GAACC