Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0786900-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33368985:33374621:-1 gene:Os01g0786900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18E description:WD40 repeat-like domain containing protein. (Os01t0786900-01)
Sequence	ATGCGGAGCGGCGCGCAGGCTCCTCGAGGCGGCGGAGGCGGCGGGGCCTTCTCGAAGCGG ACGCTGTCCGGCTACATGAGGATCATGTCGTCGGGGGCGTCCACGGCCGCGTCCAGCCTG CTGTCGGTGGGCGCGTCGCTGGTGAACTCGATCGCCAGCCACGACGAGGATGGGAGCCGT GACCAGGTACAATGGGCTGGATTTGATAAACTTGAATGTGGGGGTGACATGCTGCGACAG GTTTTACTTCTAGCTTACAGATCTGGTTTCCAAGTATGGGATGTTGAACATGCTAATGAT GTAAGACAGCTAGAATCCAGACATGATGGTACAGTTTCTTTCATGCAACTCCTAAAGAAA CCAATTGCCTCTACAAACAGTGAAGACAAATTTGCAGATGAACGGCCACTGTTAGCTCTT GCTTGTGACGGAACTAGCACAGGAAGTCTAATCAGCAATGATGGCAATGGCCCTGTTCCC AATGGAGCCAATGGTACTCTCCATAATATTGGCCATGAGAATCATCCTACTGTACTTCGG TTTTATTCATTAAGGGTCCATGATTACGTGCATACAATAAAGTTCAGATCAACTGTTTAT TCCATACGGTGCAGTTCTAGAGTTGTAGCTGTATCTCAGGCTAATCAGATACATTGTTTT GATGCTGCAACACTGGAGAGAGAATACACAATCCTTACCAGTCATATAGTTCCACCAATT TCAAGTTATGGACCACTTGCACTGGGTCCTAGATGGATTGCATATTCTGGGAATCCAGTC CCAGTTCCGGATACAGGCCGTGTTACCCCTCAGCTTCTTAATCTATCTCCCCTAGTTCCA CAACCTGGTTCAAATGGCAGTGTTGTGGCATACTATGCAAAAGAATCAAGCAAGCAACTG GCTTCTGGCATTATAACACTTGGTGATGTTGGATATAAGAAGTTGTCCAAGTATTGTTCA GACTTAATTCCAAGTAGTAACAATGTTATAAACCAAAGGAATTCTGGCTTCAAAGCAAAT GGGGCAACAATAAACGGGCATACAGACAGCGAATATGCTGGAATGGTTATTGTTCGAGAT ATTGTCTCTAAATCAATGGTGGTTCAGTTCAGGGCACATACTAGCCCCATTTCAGCACTC TGTTTTGATCCCAGTGGAACTTTGTTGGTGACAGCTTCAATTCACGGTCGAAATATCAAT GTTTTCCGCATTCTGCCTTCTTCGCATGGGAGTTCATCAGAAGCTGGTCCAAATGGAACC TGTGTTCATCTGTACAAATTGCAAAGAGGCATCACCAATGCGGTCATAAAAGATATCAGT TTTAGTGACGACAGTGAATGGATAATGATTAGCTCTTCAAGGGGAACTAGTCATTTCTTT GCAATATCTCCATATTGTGGATCAACAAGCTTTCACTACAACGAAAACAATCTTGCAGAA AATAGTTATGCGGTGGATTCATCAGTTAATCATACTGCCCATTGGTCCCAAAACTCAGCT CCCTCTCTGAGTCTCAATCAGAAGATACTCTCTGTTACGGGCCCCCCTGTAACATTGTCT GTTGTTAGTAGAATAAGAAATGGAGGCAACCTGTTGAAGGGCGCTGTTCATGGTGCTGCA GCATTTGCAACAGGTGTTTCCAGTCCAATTTCTGGTGCTATTGCTTCAACATTTCACAAT TGCAAGGGTGCCGTCAAAAACTCAGATGGAAGTTCGCCTTGCATGAAGTATCATTTACTA GTATTTTCTCCATCTGGAAGCATCATTCAGTATGTTCTCCATCGCTCTGCAGAGCAGGAT CCTGGAATTGATTTTCCCTCGAGTGCCATTCCTTATGGATCACAAAGAGAAACTGACACT AGGTTTATTATTGAGGCTCTTCAAAAGTGGGATGTTTGTCATAAAAGAAATCGAAGAGAC GCTGCTGAGAGTTTTGTATATAGTGATTTTGACATCGGAGAAAACAGTAAACTTTTTCAG AAAGTGGCAAAGAAAGGAACTAGTGTTTATCCATCCAATGGCACTGCTGTTGAAAAGCAG AAGCTAGGTGATGAGAATCATAATTTTTATATTTCTGAGAGTGAATTGCAGACTCATGTT GTTCCAACACCACTCTGGTCAAGATCTGGGATGCATTTTCAAGTAATGGGGGATGGAGCT CTAGAAGCAGACAATACTGGTATAATTTCAGGTGAACTTGAAATAGAAAAGCTCCAGACT CGCAATATTGAATCTAGGTCAAAGAATCTTATACCAGTATTTGAATCTCTTCATACATCC AGGTTTCAACAGTCAAGGGTGAGCACACCTGATAGTAACAAATATGGATTGCTTCAGCGT CAAAAGTCCGGATTTTCAGAGGACGGTAGACTCTCCTGCAGAAGCAGTTCTAGCTCTTTG GACTGCATGTCTGAAGGCCCAATTAGCACTGATGATAATGGTTTTGGTCAATGTTTAGTA GAAGATAGTGGTGGTGCTGTAAATAAGAACCCAAATGTTAACCCCCGTTCCGAGCTTGTA AATAATACTCAGAGCCTTAACACAGAGGCCCAGCTCGGATTTGTAAATAACAAAGAGGAT TGTGAAGACAGAGAGCAACTCCCAGATTTGTGA

Peptide Sequence

PEP ID	Os01t0786900-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33368985:33374621:-1 gene:Os01g0786900 transcript:Os01t0786900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18E description:WD40 repeat-like domain containing protein. (Os01t0786900-01)
Sequence	MRSGAQAPRGGGGGGAFSKRTLSGYMRIMSSGASTAASSLLSVGASLVNSIASHDEDGSR DQVQWAGFDKLECGGDMLRQVLLLAYRSGFQVWDVEHANDVRQLESRHDGTVSFMQLLKK PIASTNSEDKFADERPLLALACDGTSTGSLISNDGNGPVPNGANGTLHNIGHENHPTVLR FYSLRVHDYVHTIKFRSTVYSIRCSSRVVAVSQANQIHCFDAATLEREYTILTSHIVPPI SSYGPLALGPRWIAYSGNPVPVPDTGRVTPQLLNLSPLVPQPGSNGSVVAYYAKESSKQL ASGIITLGDVGYKKLSKYCSDLIPSSNNVINQRNSGFKANGATINGHTDSEYAGMVIVRD IVSKSMVVQFRAHTSPISALCFDPSGTLLVTASIHGRNINVFRILPSSHGSSSEAGPNGT CVHLYKLQRGITNAVIKDISFSDDSEWIMISSSRGTSHFFAISPYCGSTSFHYNENNLAE NSYAVDSSVNHTAHWSQNSAPSLSLNQKILSVTGPPVTLSVVSRIRNGGNLLKGAVHGAA AFATGVSSPISGAIASTFHNCKGAVKNSDGSSPCMKYHLLVFSPSGSIIQYVLHRSAEQD PGIDFPSSAIPYGSQRETDTRFIIEALQKWDVCHKRNRRDAAESFVYSDFDIGENSKLFQ KVAKKGTSVYPSNGTAVEKQKLGDENHNFYISESELQTHVVPTPLWSRSGMHFQVMGDGA LEADNTGIISGELEIEKLQTRNIESRSKNLIPVFESLHTSRFQQSRVSTPDSNKYGLLQR QKSGFSEDGRLSCRSSSSSLDCMSEGPISTDDNGFGQCLVEDSGGAVNKNPNVNPRSELV NNTQSLNTEAQLGFVNNKEDCEDREQLPDL

Transcript Sequence

Transcript ID	Os01t0786900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33368985:33374621:-1 gene:Os01g0786900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUTOPHAGY ASSOCIATED GENE 18E description:WD40 repeat-like domain containing protein. (Os01t0786900-01)
Sequence	AATCCCAATCTCCTCCCCCCTTCCTTCCTCGGCCAGAGAAAAAAAAAAGAGAAAAAAGAG GAGAGGCCTCGCAACTGCAAACCCTCGCTTTCTCCGATCGAATTGCTCGCCCGAGCACCA CCAGTTCGCCGCCCTTCCCACCACCAGTCGCCTCCCTCCCCCGCGCAGGGTATCTCCTCC GGCCGCCCCAGTGGCGATTCCCCCCGAGCTCCCCCGCGCGGCGCCGTGGCCATGTCGCTC ACCTGAGGATACGGTCGGTGGGCTGTTTCTTGCAAGAGTCTCTCCCCCGAGCCCCCCAAG AGAAACAGCCCGGGGGACGCCGAGTTGTTGATTCGATCGCCGGAGTTGCGCCGAGGTGAA CCTGTTTTTTGTTTTTGGTGGTGGTTCCGTCTCGGTTAATCTGCTTTAACTTGGAGGCAA AGGCTCGGTCTTCGTCTGAGGAACGCGGGGGAGCGGTGGTAGCGTCGCGTGCACGGGTCC TCCTCGAGGTCGGCTTGATGCGGAGCGGCGCGCAGGCTCCTCGAGGCGGCGGAGGCGGCG GGGCCTTCTCGAAGCGGACGCTGTCCGGCTACATGAGGATCATGTCGTCGGGGGCGTCCA CGGCCGCGTCCAGCCTGCTGTCGGTGGGCGCGTCGCTGGTGAACTCGATCGCCAGCCACG ACGAGGATGGGAGCCGTGACCAGGTACAATGGGCTGGATTTGATAAACTTGAATGTGGGG GTGACATGCTGCGACAGGTTTTACTTCTAGCTTACAGATCTGGTTTCCAAGTATGGGATG TTGAACATGCTAATGATGTAAGACAGCTAGAATCCAGACATGATGGTACAGTTTCTTTCA TGCAACTCCTAAAGAAACCAATTGCCTCTACAAACAGTGAAGACAAATTTGCAGATGAAC GGCCACTGTTAGCTCTTGCTTGTGACGGAACTAGCACAGGAAGTCTAATCAGCAATGATG GCAATGGCCCTGTTCCCAATGGAGCCAATGGTACTCTCCATAATATTGGCCATGAGAATC ATCCTACTGTACTTCGGTTTTATTCATTAAGGGTCCATGATTACGTGCATACAATAAAGT TCAGATCAACTGTTTATTCCATACGGTGCAGTTCTAGAGTTGTAGCTGTATCTCAGGCTA ATCAGATACATTGTTTTGATGCTGCAACACTGGAGAGAGAATACACAATCCTTACCAGTC ATATAGTTCCACCAATTTCAAGTTATGGACCACTTGCACTGGGTCCTAGATGGATTGCAT ATTCTGGGAATCCAGTCCCAGTTCCGGATACAGGCCGTGTTACCCCTCAGCTTCTTAATC TATCTCCCCTAGTTCCACAACCTGGTTCAAATGGCAGTGTTGTGGCATACTATGCAAAAG AATCAAGCAAGCAACTGGCTTCTGGCATTATAACACTTGGTGATGTTGGATATAAGAAGT TGTCCAAGTATTGTTCAGACTTAATTCCAAGTAGTAACAATGTTATAAACCAAAGGAATT CTGGCTTCAAAGCAAATGGGGCAACAATAAACGGGCATACAGACAGCGAATATGCTGGAA TGGTTATTGTTCGAGATATTGTCTCTAAATCAATGGTGGTTCAGTTCAGGGCACATACTA GCCCCATTTCAGCACTCTGTTTTGATCCCAGTGGAACTTTGTTGGTGACAGCTTCAATTC ACGGTCGAAATATCAATGTTTTCCGCATTCTGCCTTCTTCGCATGGGAGTTCATCAGAAG CTGGTCCAAATGGAACCTGTGTTCATCTGTACAAATTGCAAAGAGGCATCACCAATGCGG TCATAAAAGATATCAGTTTTAGTGACGACAGTGAATGGATAATGATTAGCTCTTCAAGGG GAACTAGTCATTTCTTTGCAATATCTCCATATTGTGGATCAACAAGCTTTCACTACAACG AAAACAATCTTGCAGAAAATAGTTATGCGGTGGATTCATCAGTTAATCATACTGCCCATT GGTCCCAAAACTCAGCTCCCTCTCTGAGTCTCAATCAGAAGATACTCTCTGTTACGGGCC CCCCTGTAACATTGTCTGTTGTTAGTAGAATAAGAAATGGAGGCAACCTGTTGAAGGGCG CTGTTCATGGTGCTGCAGCATTTGCAACAGGTGTTTCCAGTCCAATTTCTGGTGCTATTG CTTCAACATTTCACAATTGCAAGGGTGCCGTCAAAAACTCAGATGGAAGTTCGCCTTGCA TGAAGTATCATTTACTAGTATTTTCTCCATCTGGAAGCATCATTCAGTATGTTCTCCATC GCTCTGCAGAGCAGGATCCTGGAATTGATTTTCCCTCGAGTGCCATTCCTTATGGATCAC AAAGAGAAACTGACACTAGGTTTATTATTGAGGCTCTTCAAAAGTGGGATGTTTGTCATA AAAGAAATCGAAGAGACGCTGCTGAGAGTTTTGTATATAGTGATTTTGACATCGGAGAAA ACAGTAAACTTTTTCAGAAAGTGGCAAAGAAAGGAACTAGTGTTTATCCATCCAATGGCA CTGCTGTTGAAAAGCAGAAGCTAGGTGATGAGAATCATAATTTTTATATTTCTGAGAGTG AATTGCAGACTCATGTTGTTCCAACACCACTCTGGTCAAGATCTGGGATGCATTTTCAAG TAATGGGGGATGGAGCTCTAGAAGCAGACAATACTGGTATAATTTCAGGTGAACTTGAAA TAGAAAAGCTCCAGACTCGCAATATTGAATCTAGGTCAAAGAATCTTATACCAGTATTTG AATCTCTTCATACATCCAGGTTTCAACAGTCAAGGGTGAGCACACCTGATAGTAACAAAT ATGGATTGCTTCAGCGTCAAAAGTCCGGATTTTCAGAGGACGGTAGACTCTCCTGCAGAA GCAGTTCTAGCTCTTTGGACTGCATGTCTGAAGGCCCAATTAGCACTGATGATAATGGTT TTGGTCAATGTTTAGTAGAAGATAGTGGTGGTGCTGTAAATAAGAACCCAAATGTTAACC CCCGTTCCGAGCTTGTAAATAATACTCAGAGCCTTAACACAGAGGCCCAGCTCGGATTTG TAAATAACAAAGAGGATTGTGAAGACAGAGAGCAACTCCCAGATTTGTGATAGCAACTGT GATCAAAGACGATCACTGGTGATGGAGGAGCTTCTTGAATCGCAAGTCTTCATTGTGCGT GTGTAGCTGCTATTCTTTCATTTCTCCTCCTGGAGTTCTTGACCTCTCTTCTATAGCTCT ATTTATAAGCATTCATGATAAATTTACTGATAAAAAAATGAAGGGGAGGTCGAATTAAGG CCCAATGGGTATGGGAGCGGTGGTGCTGTGAAGTTGGGTTTCCATCTTACAAAAGAACGT GCACATAACAAGATTGTTCATTGCATTTTCAATAATAGCTCTTAATTTGTG