Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0785600-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:33317043:33317912:-1 gene:Os01g0785600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase type 11 domain containing protein. (Os01t0785600-01)
Sequence

ATGGACGGGCACGTCCGGCGGCTGCTGAACCGCGTGTCGATCGCCCTGGCGGCCGTCGCC
ACCGCCGCGCTGCTGCAGCTCTTCCGCCACTCGTCCTCCTCCTGCTTCGTCGGCTCCCCT
GCCTATTCGTCCCTATCGCTGGCGCCCTTCCCGCGCACCTCGTGCGACGCTGCGTCCCGC
CGCGTCGTCGACCCCAACCTCCGCCTCGCCAAGCTCCGGTCCTCGCCGCGGTGGCGGCGC
CGCAGCGCAGCCCTCTCCACATCCGTGTTCCCACGACTCCGCCGGCTGCGCCTCCTCCGC
AGATCGTCCCGCGTCCTCTGCGTGGCCGCGGGCGCGGGGCAGGCGGTCGACGCGCTCCAC
GTGGCCGGCGTTGGGGACGCCACCGGCGTTGATCTTGTTGACTTCCCTCCCCTGGTAAGG
CGCGCGGACCCGCACAATCTCCCGTTCTTCGACGGCGTGTTCGACGTCGTGCTCTCCGAC
GAACCGATGGCGCTCACCGGCGCGCTCTTCCCGTCCCGGTTCGTGGCCGAGGCCGAGCGC
ACCGTCCGGTGGGGCGGCGCAATTGCTCTCGCCATCGAACGGCATATCGATCTCTCTACC
GTCGCCTCCCTCTTCAAAAAGTCACGCGTGGCGGCGGCTTGGAATGCTACCTTGGATGGC
TCAGCGGCGACCATGGTAATCTTAAGAAAAAATAGCAACAATACAAAACAGCATTGA

Peptide Sequence

PEP ID

Os01t0785600-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:33317043:33317912:-1 gene:Os01g0785600 transcript:Os01t0785600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase type 11 domain containing protein. (Os01t0785600-01)
Sequence

MDGHVRRLLNRVSIALAAVATAALLQLFRHSSSSCFVGSPAYSSLSLAPFPRTSCDAASR
RVVDPNLRLAKLRSSPRWRRRSAALSTSVFPRLRRLRLLRRSSRVLCVAAGAGQAVDALH
VAGVGDATGVDLVDFPPLVRRADPHNLPFFDGVFDVVLSDEPMALTGALFPSRFVAEAER
TVRWGGAIALAIERHIDLSTVASLFKKSRVAAAWNATLDGSAATMVILRKNSNNTKQH

Transcript Sequence

Transcript ID

Os01t0785600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33317043:33317912:-1 gene:Os01g0785600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Methyltransferase type 11 domain containing protein. (Os01t0785600-01)
Sequence

AATCGCCGAACTTACCGCCGCGCCGGCCATGGACGGGCACGTCCGGCGGCTGCTGAACCG
CGTGTCGATCGCCCTGGCGGCCGTCGCCACCGCCGCGCTGCTGCAGCTCTTCCGCCACTC
GTCCTCCTCCTGCTTCGTCGGCTCCCCTGCCTATTCGTCCCTATCGCTGGCGCCCTTCCC
GCGCACCTCGTGCGACGCTGCGTCCCGCCGCGTCGTCGACCCCAACCTCCGCCTCGCCAA
GCTCCGGTCCTCGCCGCGGTGGCGGCGCCGCAGCGCAGCCCTCTCCACATCCGTGTTCCC
ACGACTCCGCCGGCTGCGCCTCCTCCGCAGATCGTCCCGCGTCCTCTGCGTGGCCGCGGG
CGCGGGGCAGGCGGTCGACGCGCTCCACGTGGCCGGCGTTGGGGACGCCACCGGCGTTGA
TCTTGTTGACTTCCCTCCCCTGGTAAGGCGCGCGGACCCGCACAATCTCCCGTTCTTCGA
CGGCGTGTTCGACGTCGTGCTCTCCGACGAACCGATGGCGCTCACCGGCGCGCTCTTCCC
GTCCCGGTTCGTGGCCGAGGCCGAGCGCACCGTCCGGTGGGGCGGCGCAATTGCTCTCGC
CATCGAACGGCATATCGATCTCTCTACCGTCGCCTCCCTCTTCAAAAAGTCACGCGTGGC
GGCGGCTTGGAATGCTACCTTGGATGGCTCAGCGGCGACCATGGTAATCTTAAGAAAAAA
TAGCAACAATACAAAACAGCATTGATCCGCAATCGTTTACTCTTGTTTACATTGCAAGTT
AATGTGGTATTGTATGGTCTTTATAGATTTGTTCGAAATTGGACAGGATAACTTACGTGA
AATTGCCAAGTGAACTACTAGTTGTGATTC