Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0785400-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33308448:33310933:1 gene:Os01g0785400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-1 description:GH3 auxin-responsive promoter family protein. (Os01t0785400-01)
Sequence	ATGCCGGAAGCACCGACCGCCAAGACAGCACCGGCCTACGGCTACGCCCCCGGGGCGCAC GCCGAGGCGCTCGAGTTCATCGAGCACGTCACGGCGAACGCCGGGCAGGTGCAGCGGCGC GTGCTCGGCGAGATCCTGGCGCAGAACGCGCCGGCCGAGTACCTGCGCCGGTACGGAATC CCCGGGTCCCCCGACGTTGTCGACGCCTTCCGCCGCCTCGTCCCGCTCGTCACATACGAG GGCCTCCAGCCAGACATCCTCCGCATCGCCAACGGCGACACCTCGCCGATCTTCTCCGGG AAGCCTATCTCCGAATTCCTCACGAGCTCGGGCACGTCGGGAGGGGAGAGGAAGCTCATG CCGACCATCGCCGACGAGATGAACAGGCGGTCGCTGCTGTACAGCCTGCTGATGCCGGTG ATGAGCCAGTCGGTGTCCGGGCTCGACAAAGGCAAGGCGATGTACCTGCTCTTCGTGAAG GCGGAGTCGCGCACGCCGGGCGGGCTCGCGGCGCGGCCGGTGCTCACAAGCTACTACCGG AGCCGGCAGTTCCTCGACCGTCCGCGCGACCCCTACACATCTTACACGAGCCCCGACGAG GCCATCCTGTGCGTGGACTCCTACCAGAGCATGTACGCGCAGCTGCTCTGCGGCCTCGTC CACCGCGCCGACGTGCTGCGCGTGGGCGCCGTGTTCGCCTCCGGCTTCCTCCGCGCCATC CATTTCCTCGAGAAGCACTGGGCGCGCCTCTGCCACGACATCCGCACCGGCGAGCTCGAC CCGGAGATCACCGACCGCGTGGTGCGCGACGCCGTCGGGCGGGTGCTCCGCGCCGACCCG GCGCTCGCCGACGCGATCGAGGACGAGTGCGCTAGGGCGTCGTGGGAGGGCATCATCCGG CGCCTGTGGCCACGCACCAAGTACATCGACGTGATCGTGACCGGCACCATGTCGCAGTAC ATCCCGACGCTCGAGTTCTACGGCGGCGGCCTGCCGCTGACGTGCACCATGTACGCCTCT TCGGAGTGCTACTTCGGCCTCAACCTGAATCCCATGTGCAAGCCCAGCGACGTCGCCTAC ACGCTCATCCCCACCATGTGCTACTACGAGTTCCTCCCCGTCAATTGCAACAATGCCACT GCCGAGGCGAGCCACCGCGACCTCGTCGACCTGGTCGACGTAAAGCTCGGGCACGAGTAC GAGCTCGTGGTCACCACGTATTCCGGGTTGTATCGTTATCGCGTGGGCGACGTGCTGAGG GTGGCGGGGTTCAAGAACAAGGCCCCGATGTTCAGCTTCGTGCGGCGGCAGAACGTGGCG CTGAGCGTCGACTCGGACAAGACGGACGAGACGGAGCTGCACGCGGCGGTGAGCGGCGCG GTGCAGCACCTGGCGCCGTTCGGCGCGTCGCTGGTGGAGTACACGAGCTACGCGGACGCG GCCACCATCCCGGGCCACTACGTGCTGTTCTGGGAGCTGCGCGCCGGCAGCACGGCGGTG CCGGCGTCCGTGTTCGAGGAGTGCTGCCTGTCCGTGGAGGAGGCACTGAACAGCGTCTAC CGGCAGGGCCGCGCGTGCGACAGGTCCATCGGCCCGCTCGAGATACGCGTCGTGGCGGAG GGCACCTTCGACAAGCTCATGGACTACGCGATCAGCCGGGGCGCGTCCATCAACCAGTAC AAGGCGCCGCGGTGCGTGCGCCCTGGCCCGGTCGTCGAGCTGCTCGACGCGAGGGTGCAG GGCAAGTACTTCAGTCCCAAGTGCCCCAAGTGGAGCCCCGGGAACAAGCAATGGAACAAA AGCAAGGATCTGGTCGGCAAGGGAGACGCCTAA

Peptide Sequence

PEP ID	Os01t0785400-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33308448:33310933:1 gene:Os01g0785400 transcript:Os01t0785400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-1 description:GH3 auxin-responsive promoter family protein. (Os01t0785400-01)
Sequence	MPEAPTAKTAPAYGYAPGAHAEALEFIEHVTANAGQVQRRVLGEILAQNAPAEYLRRYGI PGSPDVVDAFRRLVPLVTYEGLQPDILRIANGDTSPIFSGKPISEFLTSSGTSGGERKLM PTIADEMNRRSLLYSLLMPVMSQSVSGLDKGKAMYLLFVKAESRTPGGLAARPVLTSYYR SRQFLDRPRDPYTSYTSPDEAILCVDSYQSMYAQLLCGLVHRADVLRVGAVFASGFLRAI HFLEKHWARLCHDIRTGELDPEITDRVVRDAVGRVLRADPALADAIEDECARASWEGIIR RLWPRTKYIDVIVTGTMSQYIPTLEFYGGGLPLTCTMYASSECYFGLNLNPMCKPSDVAY TLIPTMCYYEFLPVNCNNATAEASHRDLVDLVDVKLGHEYELVVTTYSGLYRYRVGDVLR VAGFKNKAPMFSFVRRQNVALSVDSDKTDETELHAAVSGAVQHLAPFGASLVEYTSYADA ATIPGHYVLFWELRAGSTAVPASVFEECCLSVEEALNSVYRQGRACDRSIGPLEIRVVAE GTFDKLMDYAISRGASINQYKAPRCVRPGPVVELLDARVQGKYFSPKCPKWSPGNKQWNK SKDLVGKGDA

Transcript Sequence

Transcript ID	Os01t0785400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33308448:33310933:1 gene:Os01g0785400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GH3-1 description:GH3 auxin-responsive promoter family protein. (Os01t0785400-01)
Sequence	CACAAACCAAGCTCCATACCGCTGCCTACATCTCTGGTTAGTAGCCACCAAGGTCCAAGG AGTAACACGCTCCGTGAGAGACCGAAATCCAGGGAGCACAAATTGCACATTTGCACCAAG CACACTCGCTGCAGCTGCAGTGACATGCCGGAAGCACCGACCGCCAAGACAGCACCGGCC TACGGCTACGCCCCCGGGGCGCACGCCGAGGCGCTCGAGTTCATCGAGCACGTCACGGCG AACGCCGGGCAGGTGCAGCGGCGCGTGCTCGGCGAGATCCTGGCGCAGAACGCGCCGGCC GAGTACCTGCGCCGGTACGGAATCCCCGGGTCCCCCGACGTTGTCGACGCCTTCCGCCGC CTCGTCCCGCTCGTCACATACGAGGGCCTCCAGCCAGACATCCTCCGCATCGCCAACGGC GACACCTCGCCGATCTTCTCCGGGAAGCCTATCTCCGAATTCCTCACGAGCTCGGGCACG TCGGGAGGGGAGAGGAAGCTCATGCCGACCATCGCCGACGAGATGAACAGGCGGTCGCTG CTGTACAGCCTGCTGATGCCGGTGATGAGCCAGTCGGTGTCCGGGCTCGACAAAGGCAAG GCGATGTACCTGCTCTTCGTGAAGGCGGAGTCGCGCACGCCGGGCGGGCTCGCGGCGCGG CCGGTGCTCACAAGCTACTACCGGAGCCGGCAGTTCCTCGACCGTCCGCGCGACCCCTAC ACATCTTACACGAGCCCCGACGAGGCCATCCTGTGCGTGGACTCCTACCAGAGCATGTAC GCGCAGCTGCTCTGCGGCCTCGTCCACCGCGCCGACGTGCTGCGCGTGGGCGCCGTGTTC GCCTCCGGCTTCCTCCGCGCCATCCATTTCCTCGAGAAGCACTGGGCGCGCCTCTGCCAC GACATCCGCACCGGCGAGCTCGACCCGGAGATCACCGACCGCGTGGTGCGCGACGCCGTC GGGCGGGTGCTCCGCGCCGACCCGGCGCTCGCCGACGCGATCGAGGACGAGTGCGCTAGG GCGTCGTGGGAGGGCATCATCCGGCGCCTGTGGCCACGCACCAAGTACATCGACGTGATC GTGACCGGCACCATGTCGCAGTACATCCCGACGCTCGAGTTCTACGGCGGCGGCCTGCCG CTGACGTGCACCATGTACGCCTCTTCGGAGTGCTACTTCGGCCTCAACCTGAATCCCATG TGCAAGCCCAGCGACGTCGCCTACACGCTCATCCCCACCATGTGCTACTACGAGTTCCTC CCCGTCAATTGCAACAATGCCACTGCCGAGGCGAGCCACCGCGACCTCGTCGACCTGGTC GACGTAAAGCTCGGGCACGAGTACGAGCTCGTGGTCACCACGTATTCCGGGTTGTATCGT TATCGCGTGGGCGACGTGCTGAGGGTGGCGGGGTTCAAGAACAAGGCCCCGATGTTCAGC TTCGTGCGGCGGCAGAACGTGGCGCTGAGCGTCGACTCGGACAAGACGGACGAGACGGAG CTGCACGCGGCGGTGAGCGGCGCGGTGCAGCACCTGGCGCCGTTCGGCGCGTCGCTGGTG GAGTACACGAGCTACGCGGACGCGGCCACCATCCCGGGCCACTACGTGCTGTTCTGGGAG CTGCGCGCCGGCAGCACGGCGGTGCCGGCGTCCGTGTTCGAGGAGTGCTGCCTGTCCGTG GAGGAGGCACTGAACAGCGTCTACCGGCAGGGCCGCGCGTGCGACAGGTCCATCGGCCCG CTCGAGATACGCGTCGTGGCGGAGGGCACCTTCGACAAGCTCATGGACTACGCGATCAGC CGGGGCGCGTCCATCAACCAGTACAAGGCGCCGCGGTGCGTGCGCCCTGGCCCGGTCGTC GAGCTGCTCGACGCGAGGGTGCAGGGCAAGTACTTCAGTCCCAAGTGCCCCAAGTGGAGC CCCGGGAACAAGCAATGGAACAAAAGCAAGGATCTGGTCGGCAAGGGAGACGCCTAATAT TGAAGCTAGAGGGTGATGATCTGATCGAGTATTTGTGTGAGCTGGTAATTAATTAACGGT ACATGCATATGGTCATTGGTCGATATGTTTCTTTAGGGATATGATAATTCATGTTTGAAT TATCTCTGATGCTGCGAGAGGATCGAATAGTTATGAGATGACGACTTAGCCTATATGATC ATTTGCTTTACTCTTTCTCTGCTGTAACGCAGTATATGTTATTTCCTCCGTCTCAAAATA TAAGCATTTTTAGT