Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0784900-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:33272134:33274419:-1 gene:Os01g0784900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 069 description:Conserved hypothetical protein. (Os01t0784900-00)
Sequence	ATGGCCGACGAGTGGTGGAGTGCGTCTCAGAGGAGCCACGGCACGTCGGCGTGCTCCGCG GCGCCGTCGCCGCTCACAGCTGACAGGGTCTCCTGCGGCTGGACGTCCCCCGCCGCCGCT GCCGCCGCCGAGTCGACGAGCTCCATAACGTTCCAGGACCCCAGCAGGAGCAGCGCCGCT CATCATCAGCCTCTGTCCGATGCCGCTTCCTCTCTTGGCGATCCCCACATGGTGGACTGG ACGCAGGCCTTCCTGAGCGGGAGAAGCGACGCTAGCTTTCAGGCCGTGCTCCAGGACGAC ATGGCGGCATCCACGAGACCGTTCCGAGCCCAGCCGACGGCGGCCGACGAGGCCGTGATG ACCAATCCATTCAGGGACATGGGCGTGGGCCAAGGCCTGCTCCTCGATCAGGCGTCGGCG CCGTTGCACGGCCTGTCGTTCGACGCCGGGGAGCCAGCAGTGGCGCCGGCGACGCATAGC ATCACGACGTCGTTCGGGGATTACCAGCACTCGGCAAGCTACGACGCCGCGGCGGCGGTG ATGCAGTTCTCGCAGACGCCGAGGGCGCCCTCGTTGCCGGCGGCTGCCCAGATGCAGTTC TTGTCCGGCAGCTACCAGCTGCCTTTCGGCGGTGCGCCGCCGCTGCCGTCGCAGCTTCTC TTGCAGGCCATGCAGCCCAAGCCTAGCTGCAGCTCTAACGCTAACACCCTCCTGGCGAAG GTAAATTATAGACGTACATGCATAGCACATCAACTAGCTAGCTAA

Peptide Sequence

PEP ID	Os01t0784900-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:33272134:33274419:-1 gene:Os01g0784900 transcript:Os01t0784900-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 069 description:Conserved hypothetical protein. (Os01t0784900-00)
Sequence	MADEWWSASQRSHGTSACSAAPSPLTADRVSCGWTSPAAAAAAESTSSITFQDPSRSSAA HHQPLSDAASSLGDPHMVDWTQAFLSGRSDASFQAVLQDDMAASTRPFRAQPTAADEAVM TNPFRDMGVGQGLLLDQASAPLHGLSFDAGEPAVAPATHSITTSFGDYQHSASYDAAAAV MQFSQTPRAPSLPAAAQMQFLSGSYQLPFGGAPPLPSQLLLQAMQPKPSCSSNANTLLAK VNYRRTCIAHQLAS

Transcript Sequence

Transcript ID	Os01t0784900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33272134:33274419:-1 gene:Os01g0784900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:basic helix-loop-helix protein 069 description:Conserved hypothetical protein. (Os01t0784900-00)
Sequence	CGTTCCATCCAACCTACTGCCGCCGCTGCACCTCAAAGCAAAACAACATCGCAAACAAAG AGACATACAGGGCGAGATCGATCCATCTCGATTCCGCCCTTCTTCGCCGCCATGGCCGAC GAGTGGTGGAGTGCGTCTCAGAGGAGCCACGGCACGTCGGCGTGCTCCGCGGCGCCGTCG CCGCTCACAGCTGACAGGGTCTCCTGCGGCTGGACGTCCCCCGCCGCCGCTGCCGCCGCC GAGTCGACGAGCTCCATAACGTTCCAGGACCCCAGCAGGAGCAGCGCCGCTCATCATCAG CCTCTGTCCGATGCCGCTTCCTCTCTTGGCGATCCCCACATGGTGGACTGGACGCAGGCC TTCCTGAGCGGGAGAAGCGACGCTAGCTTTCAGGCCGTGCTCCAGGACGACATGGCGGCA TCCACGAGACCGTTCCGAGCCCAGCCGACGGCGGCCGACGAGGCCGTGATGACCAATCCA TTCAGGGACATGGGCGTGGGCCAAGGCCTGCTCCTCGATCAGGCGTCGGCGCCGTTGCAC GGCCTGTCGTTCGACGCCGGGGAGCCAGCAGTGGCGCCGGCGACGCATAGCATCACGACG TCGTTCGGGGATTACCAGCACTCGGCAAGCTACGACGCCGCGGCGGCGGTGATGCAGTTC TCGCAGACGCCGAGGGCGCCCTCGTTGCCGGCGGCTGCCCAGATGCAGTTCTTGTCCGGC AGCTACCAGCTGCCTTTCGGCGGTGCGCCGCCGCTGCCGTCGCAGCTTCTCTTGCAGGCC ATGCAGCCCAAGCCTAGCTGCAGCTCTAACGCTAACACCCTCCTGGCGAAGGTAAATTAT AGACGTACATGCATAGCACATCAACTAGCTAGCTAAGCGTCTCCGACTCGCCGGCGGCAG CGAAGAGGCCACGGATCGAGGTGCCGTCGCCGTTGCCGACGTTCAAGGTGAGGAAAGAGA AGCTAGGGGACAGAATCACTGCGCTCCAGCAACTAGTCTCGCCTTTTGGAAAGACTGATA CCGCATCGGTTCTTCACGAGGCCATCGAATACATCAAGTTCCTTCACGAACAAGTTGCGT CTTTGAGCTCTCCGTACTTGAAGAATGGGAACCCATTGCAGCACTTCCAGCAGAAGGGTT CTGAGAGCACGAAGGACGCAGAGCAGCCGAAGCCGGATCTGCGCAGCCGAGGCCTGTGCC TTGTGCCGGTGGCAAGCACTTATACGGTGGCGAGCGAGACGGTGCCGGAGTTCTGGCACC CAACATTCGGAGGCACGTTTAGGTAGATATAGGTATTAGTTTATAGCTAACTAGACTCGG AAGAAAAGCAATTGGATAATCATTCAAGCAATGAAGCAATCAAAGGATGTCTTTGAAAGG AAAAGAGCTAGGGAGAGATGATAATAGGGGTCGATTCTTCAAAGACAGGC