Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0783100-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:33182589:33186141:1 gene:Os01g0783100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0783100-01)
Sequence	ATGGCCGCCGCGCTCGTCACCTCCTTCCCGCACGCGATCCCCAAGCCGCACCACCACCTC CACGCCGCACACCACGCCCACCTCACCGCTGCCGCCACGAGGCCCGAGGCCCCCAGCGCG TCGTCCCCCAACCCGGCCAACGCCAGGCTCCGCCGCCTCATCGCCCGCGACGACCTCGCC GAGGCCGCGCGCCTCGTCGACCGCGCCACCTCCCGCGGGGAGGCCCCCGACGTGTACCTG TGCACCAAGCTCATCCGCAACCTATGCCGCCGGGGCCGCACCTCCGACGCCGCGCGCGTC CTCCGCGCGGCCGAGAGGTCCGGCACCGCCGTCGACGTCTTCGCCTACAACACGCTCGTC GCGGGGTACTGCCGGTACGGCCAGCTCGACGCCGCGCGCCGGCTCATCGCGTCCATGCCC GTCGCGCCCGACGCGTACACGTACACGCCGATCATCCGGGGGCTCTGCGACCGTGGGAGG GTCGGCGAGGCGCTCAGCCTGCTCGACGATATGCTCCACCGGGGCTGCCAGCCCAGCGTG GTGACCTACACAGTTCTCCTGGAGGCCGTATGCAAGAGTACTGGGTTCGGGCAGGCAATG GAGGTCCTCGATGAGATGCGTGCCAAGGGGTGCACGCCCAACATTGTCACCTACAATGTC ATCATCAACGGAATGTGCAGGGAGGGCCGCGTCGACGATGCGAGGGAGTTCTTGAACAGG TTGTCCTCGTATGGCTTCCAACCCGACACTGTCAGCTACACCACTGTGCTTAAGGGTTTG TGTGCTGCTAAGCGGTGGGAGGATGTTGAGGAGCTCTTTGCTGAGATGATGGAGAAGAAT TGCATGCCGAATGAGGTAACATTCGACATGTTAGTCAGATTCTTTTGTCGTGGAGGTATG GTGGAGCGGGCAATCCAAGTTCTTGAGCAAATGTCCGGACATGGATGCGCAGCCAACACT ACCTTGTGTAACATTGTCATAAACACTATCTGTAAACAAGGACGTGTTGATGATGCCTTT CAGTTCTTGAACAACATGGGTTCCTATGGATGCAGTCCAGATACCATCAGCTATACAACT GTGCTAAAGGGCTTGTGTCGCGCTGAGCGATGGGAGGATGCCAAAGAGCTCTTGAAAGAG ATGGTCCGGAAGAATTGTCCCCCAAATGAGGTGACATTCAATACATTCATCTGCATCTTA TGCCAAAAAGGATTGATCGAGCAAGCTACTATGCTTATCGAACAAATGTCAGAGCATGGA TGTGAAGTGAATATTGTCACATACAACGCCCTCGTTAATGGCTTTTGTGTGCAAGGGCGC GTTGATAGCGCTCTTGAGTTATTTTACAGCATGCCTTGCAAGCCCAACACCATTACATAC ACTACCTTGCTAACAGGTTTGTGCAATGCCGAGCGGTTGGATGCTGCTGCAGAACTCTTA GCTGAGATGCTCCAGAAAGATTGCGCACCAAATGTAGTGACTTTCAATGTACTTGTGAGT TTCTTCTGTCAAAAAGGATTAATGGATGAAGCAATTGAACTTGTAGAACAGATGATGGAG CACGGTTGCACCCCTAACCTGATTACATACAATACTTTACTCGATGGGATAACCAAGGAT TGCAACTCAGAAGAAGCTCTGGAGCTATTGCATGGTTTGGTCAGCAATGGGGTATCCCCA GATATAGTTACCTATTCTTCAATCATTGGTGTCCTCTCAAGAGAAGATAGAGTAGAAGAA GCAATCAAAATGTTCCATATTGTGCAAGATTTGGGGATGAGACCTAAAGCAGTGATATAC AACAAGATACTACTTGCACTCTGTAAAAGATGTAATACAGATGGTGCCATTGATTTTTTC GCTTATATGGTGTCTAATGGTTGCATGCCCAATGAGTTGACCTACATTACACTCATTGAA GGCCTTGCAAATGAGGATTTCTTGAAGGAGACAAGAGATTTACTGCGCGAGTTGTGCTCA AGAGGTGTTCTAAATAAAAACTTGCTTGAAGAGTGGCGCCCTAAGTTTTCGAATCAAACC GTGCATTTACCTTGA

Peptide Sequence

PEP ID	Os01t0783100-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:33182589:33186141:1 gene:Os01g0783100 transcript:Os01t0783100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0783100-01)
Sequence	MAAALVTSFPHAIPKPHHHLHAAHHAHLTAAATRPEAPSASSPNPANARLRRLIARDDLA EAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV AGYCRYGQLDAARRLIASMPVAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG CEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTITYTTLLTGLCNAERLDAAAELL AEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKD CNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIY NKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCS RGVLNKNLLEEWRPKFSNQTVHLP

Transcript Sequence

Transcript ID	Os01t0783100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:33182589:33186141:1 gene:Os01g0783100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os01t0783100-01)
Sequence	GGTCCCGCCCAATCTCCACGCGACGCGATGCCCATCACACCACACGCCCCCGCGCCCGCG CCCGCGACGCCGCGACGCCGCCGCCACCACCACCGCTCCGCCCGCCGCACCACCCACCGA TGGCCGCCGCGCTCGTCACCTCCTTCCCGCACGCGATCCCCAAGCCGCACCACCACCTCC ACGCCGCACACCACGCCCACCTCACCGCTGCCGCCACGAGGCCCGAGGCCCCCAGCGCGT CGTCCCCCAACCCGGCCAACGCCAGGCTCCGCCGCCTCATCGCCCGCGACGACCTCGCCG AGGCCGCGCGCCTCGTCGACCGCGCCACCTCCCGCGGGGAGGCCCCCGACGTGTACCTGT GCACCAAGCTCATCCGCAACCTATGCCGCCGGGGCCGCACCTCCGACGCCGCGCGCGTCC TCCGCGCGGCCGAGAGGTCCGGCACCGCCGTCGACGTCTTCGCCTACAACACGCTCGTCG CGGGGTACTGCCGGTACGGCCAGCTCGACGCCGCGCGCCGGCTCATCGCGTCCATGCCCG TCGCGCCCGACGCGTACACGTACACGCCGATCATCCGGGGGCTCTGCGACCGTGGGAGGG TCGGCGAGGCGCTCAGCCTGCTCGACGATATGCTCCACCGGGGCTGCCAGCCCAGCGTGG TGACCTACACAGTTCTCCTGGAGGCCGTATGCAAGAGTACTGGGTTCGGGCAGGCAATGG AGGTCCTCGATGAGATGCGTGCCAAGGGGTGCACGCCCAACATTGTCACCTACAATGTCA TCATCAACGGAATGTGCAGGGAGGGCCGCGTCGACGATGCGAGGGAGTTCTTGAACAGGT TGTCCTCGTATGGCTTCCAACCCGACACTGTCAGCTACACCACTGTGCTTAAGGGTTTGT GTGCTGCTAAGCGGTGGGAGGATGTTGAGGAGCTCTTTGCTGAGATGATGGAGAAGAATT GCATGCCGAATGAGGTAACATTCGACATGTTAGTCAGATTCTTTTGTCGTGGAGGTATGG TGGAGCGGGCAATCCAAGTTCTTGAGCAAATGTCCGGACATGGATGCGCAGCCAACACTA CCTTGTGTAACATTGTCATAAACACTATCTGTAAACAAGGACGTGTTGATGATGCCTTTC AGTTCTTGAACAACATGGGTTCCTATGGATGCAGTCCAGATACCATCAGCTATACAACTG TGCTAAAGGGCTTGTGTCGCGCTGAGCGATGGGAGGATGCCAAAGAGCTCTTGAAAGAGA TGGTCCGGAAGAATTGTCCCCCAAATGAGGTGACATTCAATACATTCATCTGCATCTTAT GCCAAAAAGGATTGATCGAGCAAGCTACTATGCTTATCGAACAAATGTCAGAGCATGGAT GTGAAGTGAATATTGTCACATACAACGCCCTCGTTAATGGCTTTTGTGTGCAAGGGCGCG TTGATAGCGCTCTTGAGTTATTTTACAGCATGCCTTGCAAGCCCAACACCATTACATACA CTACCTTGCTAACAGGTTTGTGCAATGCCGAGCGGTTGGATGCTGCTGCAGAACTCTTAG CTGAGATGCTCCAGAAAGATTGCGCACCAAATGTAGTGACTTTCAATGTACTTGTGAGTT TCTTCTGTCAAAAAGGATTAATGGATGAAGCAATTGAACTTGTAGAACAGATGATGGAGC ACGGTTGCACCCCTAACCTGATTACATACAATACTTTACTCGATGGGATAACCAAGGATT GCAACTCAGAAGAAGCTCTGGAGCTATTGCATGGTTTGGTCAGCAATGGGGTATCCCCAG ATATAGTTACCTATTCTTCAATCATTGGTGTCCTCTCAAGAGAAGATAGAGTAGAAGAAG CAATCAAAATGTTCCATATTGTGCAAGATTTGGGGATGAGACCTAAAGCAGTGATATACA ACAAGATACTACTTGCACTCTGTAAAAGATGTAATACAGATGGTGCCATTGATTTTTTCG CTTATATGGTGTCTAATGGTTGCATGCCCAATGAGTTGACCTACATTACACTCATTGAAG GCCTTGCAAATGAGGATTTCTTGAAGGAGACAAGAGATTTACTGCGCGAGTTGTGCTCAA GAGGTGTTCTAAATAAAAACTTGCTTGAAGAGTGGCGCCCTAAGTTTTCGAATCAAACCG TGCATTTACCTTGAGTCATCATGAATCCAAAACCTTTAGTACTGTTGAGTATCCATGGAA CTCTATTCCTCATCTACAGTAATGTGGAATCAGTGGCACACTGGCATGTCCTGTGTATGC TTCAAGATACTTTTCATGATGATGGGACAGACCACAGACGAGGGCTCCTAGCCTCATGTA CAGGAATCGTGATTGTGTTTTCCTTGCTTCAGACTGGCGTTTCATACCGATTACCTTACA TCAAACTGACATCTCAAATTACTGCGTTATAATTTCATTTCGGTTGCAACTTCTTGCTTT GCCAGGCTGATACAATCATGCCACATGCATCATCGAGCATTTGCATGTTGGTGACTATTG GGCACAGAGACGCAATAATCCATTTTGGGAACAAGTCAATGGCCTGGCAAAGGGAAGCAG TTTCAGTTGTACCAAGGTTC