Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0783000-01
CDS Infomation

cds chromosome:IRGSP-1.0:1:33181340:33181729:-1 gene:Os01g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 3 description:Similar to lysM domain containing protein. (Os01t0783000-01)
Sequence

GTACGTATATATGCTGCAGGTTACGTGGTGGTGGAGGATGTGAAGGCGCCGGTCCCGGCG
CTGACATGCAACAAGGTGCACGGGGTGCAGGCGTCCGAGACGTGCTTCTCCGTGTCGCAG
AGCGCCGGGCTGACTCAGGACCAGTTCCTCGCCTTCAACCCAAACATCAACTGCGCGAAG
GTCTTCGTCGGCCAGTGGGTCTGCCTCGACGCTGCCGCCGCTTAA

Peptide Sequence

PEP ID

Os01t0783000-01
PEP Infomation

pep chromosome:IRGSP-1.0:1:33181340:33181729:-1 gene:Os01g0783000 transcript:Os01t0783000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 3 description:Similar to lysM domain containing protein. (Os01t0783000-01)
Sequence

VRIYAAGYVVVEDVKAPVPALTCNKVHGVQASETCFSVSQSAGLTQDQFLAFNPNINCAK
VFVGQWVCLDAAAA

Transcript Sequence

Transcript ID

Os01t0783000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:33181340:33181729:-1 gene:Os01g0783000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ARBUSCULAR MYCORRHIZAL SPECIFIC MARKER 3 description:Similar to lysM domain containing protein. (Os01t0783000-01)
Sequence

ATGGCGAACCACGGCGCCGCGGCTCTCGCGATCATCGCGTCCCTCCTCGTGGCGGTCACC
CTCGCCGACGCGAGGCTCACCGCGCACCACGGTATACGAGACACACAAAGCTCGTGATTT
CTGCCAAGTATTCCGTGCGAATCGTTCGTGACGTACTATATGTGAGTACGTATATATGCT
GCAGGTTACGTGGTGGTGGAGGATGTGAAGGCGCCGGTCCCGGCGCTGACATGCAACAAG
GTGCACGGGGTGCAGGCGTCCGAGACGTGCTTCTCCGTGTCGCAGAGCGCCGGGCTGACT
CAGGACCAGTTCCTCGCCTTCAACCCAAACATCAACTGCGCGAAGGTCTTCGTCGGCCAG
TGGGTCTGCCTCGACGCTGCCGCCGCTTAA