Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0777300-00
CDS Infomation	cds chromosome:IRGSP-1.0:1:32893402:32899783:1 gene:Os01g0777300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Exonuclease-1, exonuclease 1 description:DNA repair protein (XPGC)/yeast Rad family protein. (Os01t0777300-00)
Sequence	ATGGGGATCCAGGGATTGCTGCCGCAGCTGAAGTCGATCATGGCGCCCATCGGGGTGGAG GCGCTCAAGGGCCAGACGGTGGCCGTCGACACCTACTCCTGGCTCCACAAGGGCGCCCTC TCCTGCGGCGACCGCCTCTGCAAGGGCCTACCCACCACCAGGCATATTGAGTATTGCATG CATAGGGTTAACATGTTGCGGCACCATGGCGTGAAACCAATCCTTGTATTTGACGGAGGT CATCTGCCGATGAAGGGTGATCAAGAGACTAAACGTGAAAGGTCACGAAAGGAAAATCTT GAGCGTGCCAAGGAGCATGAATCTGCTGGGAATTCACGTGCTGCTTTTGAGTGTTATCAG AAAGCTGTTGACATTACACCTAGGATTGCTTTTGAACTGATCCAGGTATTGAAGCAAGAA AAGGTTGATTATATTGTTGCGCCTTATGAAGCAGATGCACAAATGACATTCTTGTCTGTG AACAAACTTGTTGATGCCGTTATCACAGAGGATTCTGATCTGATACCATTTGGCTGTTCT AGAATTATTTTCAAGATGGACAAGTTTGGACAAGGTGTTGAATTTCATATTACACGATTG CAGCGATGCAGGGAGCTTGATCTTAATGGATTCACTATGCAAATGCTACTAGAGATGTGT ATTTTAAGTGGCTGTGATTATCTTCCATCATTGCCTGGAATGGGTGTGAAACGAGCTCAT GCACTTATCCAAAAGCTCAAGGGTCATGAAAAGGTAATCAAGCACCTGAGGTACAGTGCT GTTTCTGTTCCACCTCAATATGAAGAAAACTTCAGAAAGGCGATCTGGGCATTTCAGTTC CAAAGAGTTTATGACCCTGTGACGGAAGATATTGTTCATTTGTCAGGCATTCCCCATGGC AGTAGTGAAGACTTGGACTTTTTGGGCCCATGGCTACCACAGACTGTTGCTAAAGGCATT GCCCAAGGGAATATCGATCCGATTACCAAGGAACCATTTGAGGGCAAAACAGAGAGTAGC GCACTCGCTTTTGATAAAGTGCATCTGAACAGAGAGTCCAGTGCTCCTTCAAATGGAAAG AAAAAGCTTGATCTACCTGTCCAAAGAAACGTATTGACAAATTACTTCTGCTTAGCATCG CTTGAGGCAAAACGGAAGTTCAGAGCACCTAAGGTTACACCTAAGCAACAAGTACTTAAT GGGTCTTTGCCCAGTCCCAGAATTGAAGACTCTGGTACCCCTGATTTAATTGAAGATACT AGCTTGCCATCAAATAACATTCAAGTTTATCAGTGTAGTTCTGAGCATTTTAGCTCAGGA ACCCCTCTAGATGATTCAATCAATACCGCCTCTCAATGTAGTTCTGAGCGTGTCCGCTGT GACATCCCTCGGGATGATTCAGCCAGTGTTTCACCCCAGTGTTCTCATGATATTGGTAGT GATCCTGCTGAGGACCCAGACATTGAAGGCAACAAGGTGAAAGTCAACTTCTGCAACAGA AGTACAATACCGACAGGCTCTTTCTTAGAGGGGACTTTGCCTGGGATATCAGATCCATTT TTAGATTCACACAACACAGAGCCATCCAGAGCTGCACCACGTTATGCTGAAAAAAGCAAT GTGGTCTCTGCCAATAGAAATATTACTGTGAGGAGTTCATATTTCAAAACAGTAAATAAA AGAGTTTGCACAAATCAAGGAGAAGATGAGTGCCATGATGAAGATAACTGCGAGACTGGT AATTACACTCTTCCTGGAGATCAACAAAGAAGCTCTGGAGGTATATTGAAGAGAAGAAAA TTTAGTGATCCCCAAAATTTTGAAGATGGAATGTTTCAACCCACTAGTCCTCATGAAAGT CCACCGGTTGCTGATAAAGGCTGTGACTCTGATTCCCACGACGGTATCAACACAAATTCT GAAGGAAAATTTGGATGCAATGTCGCCCATGTAAATAAATACAGTGGCATTGCAGAGAAA TCAATGGATAAGTTTGCTGCGCTGATATCATCTTTCAGATACGCAGGCTCTCGTGCCAGT GGTCTTCGCGCTCCTTTAAAGGATGTGAAGAACACTCTTCCTGTCAGATCTGTTCTCAGA CCTCCAGAACAGAGATTCGGTTGTACGGCTAAGAAGACTACTAGAGTGCCTCTACAAAGC AGATTCTCAAGTGATGCTACAAACAGCACTGACGTTCCTGATCTGAGCACATTTGCATAC AGGCCTACAACTGCTTCTGCTCATTCTGATCAGGGGAAGATCACAAGCAAAGCTACAGAT GCTGCTGCTGGACCTCCTGACCTGAGAACATTTGCTTATGCACCAACAAGATCTACCACC AGCCGTTTTGATCAGAGTGAAAACACGCGCAAAGCTATGTGCACTGCGGACAGCCCTCCT GATATTAGCACATTCGAATATAAACCCATGAAAAGCGCCGTCAGACGTTCAGATGGGAGC AAGTTTTCAGGTGCAGCACTAAAAGCAGCTAGACGAACCTCTCGGAGCTGA

Peptide Sequence

PEP ID	Os01t0777300-00
PEP Infomation	pep chromosome:IRGSP-1.0:1:32893402:32899783:1 gene:Os01g0777300 transcript:Os01t0777300-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Exonuclease-1, exonuclease 1 description:DNA repair protein (XPGC)/yeast Rad family protein. (Os01t0777300-00)
Sequence	MGIQGLLPQLKSIMAPIGVEALKGQTVAVDTYSWLHKGALSCGDRLCKGLPTTRHIEYCM HRVNMLRHHGVKPILVFDGGHLPMKGDQETKRERSRKENLERAKEHESAGNSRAAFECYQ KAVDITPRIAFELIQVLKQEKVDYIVAPYEADAQMTFLSVNKLVDAVITEDSDLIPFGCS RIIFKMDKFGQGVEFHITRLQRCRELDLNGFTMQMLLEMCILSGCDYLPSLPGMGVKRAH ALIQKLKGHEKVIKHLRYSAVSVPPQYEENFRKAIWAFQFQRVYDPVTEDIVHLSGIPHG SSEDLDFLGPWLPQTVAKGIAQGNIDPITKEPFEGKTESSALAFDKVHLNRESSAPSNGK KKLDLPVQRNVLTNYFCLASLEAKRKFRAPKVTPKQQVLNGSLPSPRIEDSGTPDLIEDT SLPSNNIQVYQCSSEHFSSGTPLDDSINTASQCSSERVRCDIPRDDSASVSPQCSHDIGS DPAEDPDIEGNKVKVNFCNRSTIPTGSFLEGTLPGISDPFLDSHNTEPSRAAPRYAEKSN VVSANRNITVRSSYFKTVNKRVCTNQGEDECHDEDNCETGNYTLPGDQQRSSGGILKRRK FSDPQNFEDGMFQPTSPHESPPVADKGCDSDSHDGINTNSEGKFGCNVAHVNKYSGIAEK SMDKFAALISSFRYAGSRASGLRAPLKDVKNTLPVRSVLRPPEQRFGCTAKKTTRVPLQS RFSSDATNSTDVPDLSTFAYRPTTASAHSDQGKITSKATDAAAGPPDLRTFAYAPTRSTT SRFDQSENTRKAMCTADSPPDISTFEYKPMKSAVRRSDGSKFSGAALKAARRTSRS

Transcript Sequence

Transcript ID	Os01t0777300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32893402:32899783:1 gene:Os01g0777300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Exonuclease-1, exonuclease 1 description:DNA repair protein (XPGC)/yeast Rad family protein. (Os01t0777300-00)
Sequence	GAGAGAGAGAGAGAGAGAGAGAGAGAGGCGGCAATGGGGATCCAGGGATTGCTGCCGCAG CTGAAGTCGATCATGGCGCCCATCGGGGTGGAGGCGCTCAAGGGCCAGACGGTGGCCGTC GACACCTACTCCTGGCTCCACAAGGGCGCCCTCTCCTGCGGCGACCGCCTCTGCAAGGGC CTACCCACCACCAGGCATATTGAGTATTGCATGCATAGGGTTAACATGTTGCGGCACCAT GGCGTGAAACCAATCCTTGTATTTGACGGAGGTCATCTGCCGATGAAGGGTGATCAAGAG ACTAAACGTGAAAGGTCACGAAAGGAAAATCTTGAGCGTGCCAAGGAGCATGAATCTGCT GGGAATTCACGTGCTGCTTTTGAGTGTTATCAGAAAGCTGTTGACATTACACCTAGGATT GCTTTTGAACTGATCCAGGTATTGAAGCAAGAAAAGGTTGATTATATTGTTGCGCCTTAT GAAGCAGATGCACAAATGACATTCTTGTCTGTGAACAAACTTGTTGATGCCGTTATCACA GAGGATTCTGATCTGATACCATTTGGCTGTTCTAGAATTATTTTCAAGATGGACAAGTTT GGACAAGGTGTTGAATTTCATATTACACGATTGCAGCGATGCAGGGAGCTTGATCTTAAT GGATTCACTATGCAAATGCTACTAGAGATGTGTATTTTAAGTGGCTGTGATTATCTTCCA TCATTGCCTGGAATGGGTGTGAAACGAGCTCATGCACTTATCCAAAAGCTCAAGGGTCAT GAAAAGGTAATCAAGCACCTGAGGTACAGTGCTGTTTCTGTTCCACCTCAATATGAAGAA AACTTCAGAAAGGCGATCTGGGCATTTCAGTTCCAAAGAGTTTATGACCCTGTGACGGAA GATATTGTTCATTTGTCAGGCATTCCCCATGGCAGTAGTGAAGACTTGGACTTTTTGGGC CCATGGCTACCACAGACTGTTGCTAAAGGCATTGCCCAAGGGAATATCGATCCGATTACC AAGGAACCATTTGAGGGCAAAACAGAGAGTAGCGCACTCGCTTTTGATAAAGTGCATCTG AACAGAGAGTCCAGTGCTCCTTCAAATGGAAAGAAAAAGCTTGATCTACCTGTCCAAAGA AACGTATTGACAAATTACTTCTGCTTAGCATCGCTTGAGGCAAAACGGAAGTTCAGAGCA CCTAAGGTTACACCTAAGCAACAAGTACTTAATGGGTCTTTGCCCAGTCCCAGAATTGAA GACTCTGGTACCCCTGATTTAATTGAAGATACTAGCTTGCCATCAAATAACATTCAAGTT TATCAGTGTAGTTCTGAGCATTTTAGCTCAGGAACCCCTCTAGATGATTCAATCAATACC GCCTCTCAATGTAGTTCTGAGCGTGTCCGCTGTGACATCCCTCGGGATGATTCAGCCAGT GTTTCACCCCAGTGTTCTCATGATATTGGTAGTGATCCTGCTGAGGACCCAGACATTGAA GGCAACAAGGTGAAAGTCAACTTCTGCAACAGAAGTACAATACCGACAGGCTCTTTCTTA GAGGGGACTTTGCCTGGGATATCAGATCCATTTTTAGATTCACACAACACAGAGCCATCC AGAGCTGCACCACGTTATGCTGAAAAAAGCAATGTGGTCTCTGCCAATAGAAATATTACT GTGAGGAGTTCATATTTCAAAACAGTAAATAAAAGAGTTTGCACAAATCAAGGAGAAGAT GAGTGCCATGATGAAGATAACTGCGAGACTGGTAATTACACTCTTCCTGGAGATCAACAA AGAAGCTCTGGAGGTATATTGAAGAGAAGAAAATTTAGTGATCCCCAAAATTTTGAAGAT GGAATGTTTCAACCCACTAGTCCTCATGAAAGTCCACCGGTTGCTGATAAAGGCTGTGAC TCTGATTCCCACGACGGTATCAACACAAATTCTGAAGGAAAATTTGGATGCAATGTCGCC CATGTAAATAAATACAGTGGCATTGCAGAGAAATCAATGGATAAGTTTGCTGCGCTGATA TCATCTTTCAGATACGCAGGCTCTCGTGCCAGTGGTCTTCGCGCTCCTTTAAAGGATGTG AAGAACACTCTTCCTGTCAGATCTGTTCTCAGACCTCCAGAACAGAGATTCGGTTGTACG GCTAAGAAGACTACTAGAGTGCCTCTACAAAGCAGATTCTCAAGTGATGCTACAAACAGC ACTGACGTTCCTGATCTGAGCACATTTGCATACAGGCCTACAACTGCTTCTGCTCATTCT GATCAGGGGAAGATCACAAGCAAAGCTACAGATGCTGCTGCTGGACCTCCTGACCTGAGA ACATTTGCTTATGCACCAACAAGATCTACCACCAGCCGTTTTGATCAGAGTGAAAACACG CGCAAAGCTATGTGCACTGCGGACAGCCCTCCTGATATTAGCACATTCGAATATAAACCC ATGAAAAGCGCCGTCAGACGTTCAGATGGGAGCAAGTTTTCAGGTGCAGCACTAAAAGCA GCTAGACGAACCTCTCGGAGCTGATTCTCACAAAATTGTGGATGCACCTGCCAGCTTCCT TATCTGAGCATGTTTGGATTTGCGTATGCCTTCTGTCTGCGTTCATGATCTGAGTTCAAC AGAATCATCCAGCAACAAATGCTCTCAATAAAAGTGCATTCCATTTTGCCCAAAGTGCAA GCACGGCTGAGGTAGCTGCCATTCACTACTACTAGCTGCAGGGCTTATCAGTTCAGACTT CAGAGCTCATCCGTATCTGCGCAATCAGAAGCACACATGTTCTGAAGGGAAGTGCTTTAT CTTCTCGGTTTCCAGAGCCAATTATGTGGCATTTTGCGAGCCAAATGTATGTGCTCGTTT TTGCCTTGTCCAATGAGGTTCTTGTATGAACAGCAGTCGAATTTGCGATGCTATTTAAGC CGCAAATGAGGATACTGTTGTATTGTTCCTTTTTGAGAAGATACTGCTGTATGTTCATTC TTATACAAGTGTGAGCATTCCTTCAGAATTCAGATAGCATTACTCTTGTCAACTATTGAT CAAGATGTTGGAAAGACTTTGAAACCGGCTGTTTAAGC