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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0776600-03
CDS Infomation

cds chromosome:IRGSP-1.0:1:32848291:32850121:-1 gene:Os01g0776600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 10A description:Similar to Purple acid phosphatase (EC 3.1.3.2). (Os01t0776600-01);Similar to predicted protein. (Os01t0776600-02);Similar to predicted protein. (Os01t0776600-03)
Sequence

AATCATGAGATAGATTTTGCCCCAGAACTTGGTGAAACGAAGCCATTCAAGCCATACAGC
TATAGGTACCCCACACCTTATAAGGCTTCCGGTAGCACGGCACCTTTCTGGTATTCTGTC
AAAAGAGCATCTGCTTATATTATTGTCTTGGCATCATATTCATCATATGGAAAGTATACT
CCTCAGTACAAGTGGCTTGAAGCTGAGTTTCCCAAGGTTAACAGGAGTGAAACGCCATGG
TTGATAGTGCTATTGCATGCTCCGTGGTACAACAGCTATAACTATCACTACATGGAAGGT
GAAAGCATGAGAGTTATGTATGAGCCGTGGTTCGTCAAGTACAAAGTTGACCTCGTGTTT
GCAGGACATGTTCATGCCTATGAACGGACACACAGGATATCAAATGTCGCGTACAACATT
GTGAATGGCCAGTGCACTCCAGTCCATGATCAGTCTGCTCCAGTCTACATAACCATCGGA
GATGGAGGAAACCAGGAAGGACTGGCCACCAACATGACGGCGCCGCAGCCTGGCTACTCG
GCCTTCAGGGAGTCGAGCTTCGGGCACGCCATCCTGGACATCAAGAACAGGACGCACGCG
TACTACACGTGGCACCGCAACCAGGACGGCAACGCTGTGGCGGCTGACTCCATGTGGTTC
ACCAACAGATACTGGCAGCCGACGGATGAATCTTTGGACGACTCCCAGTGA

Peptide Sequence

PEP ID

Os01t0776600-03
PEP Infomation

pep chromosome:IRGSP-1.0:1:32848291:32850121:-1 gene:Os01g0776600 transcript:Os01t0776600-03 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 10A description:Similar to Purple acid phosphatase (EC 3.1.3.2). (Os01t0776600-01);Similar to predicted protein. (Os01t0776600-02);Similar to predicted protein. (Os01t0776600-03)
Sequence

NHEIDFAPELGETKPFKPYSYRYPTPYKASGSTAPFWYSVKRASAYIIVLASYSSYGKYT
PQYKWLEAEFPKVNRSETPWLIVLLHAPWYNSYNYHYMEGESMRVMYEPWFVKYKVDLVF
AGHVHAYERTHRISNVAYNIVNGQCTPVHDQSAPVYITIGDGGNQEGLATNMTAPQPGYS
AFRESSFGHAILDIKNRTHAYYTWHRNQDGNAVAADSMWFTNRYWQPTDESLDDSQ

Transcript Sequence

Transcript ID

Os01t0776600-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:32848291:32850121:-1 gene:Os01g0776600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PURPLE ACID PHOSPHATASE 10A description:Similar to Purple acid phosphatase (EC 3.1.3.2). (Os01t0776600-01);Similar to predicted protein. (Os01t0776600-02);Similar to predicted protein. (Os01t0776600-03)
Sequence

AATCATGAGATAGATTTTGCCCCAGAACTTGGTGAAACGAAGCCATTCAAGCCATACAGC
TATAGGTACCCCACACCTTATAAGGCTTCCGGTAGCACGGCACCTTTCTGGTATTCTGTC
AAAAGAGCATCTGCTTATATTATTGTCTTGGCATCATATTCATCATATGGAAAGTATACT
CCTCAGTACAAGTGGCTTGAAGCTGAGTTTCCCAAGGTTAACAGGAGTGAAACGCCATGG
TTGATAGTGCTATTGCATGCTCCGTGGTACAACAGCTATAACTATCACTACATGGAAGGT
GAAAGCATGAGAGTTATGTATGAGCCGTGGTTCGTCAAGTACAAAGTTGACCTCGTGTTT
GCAGGACATGTTCATGCCTATGAACGGACACACAGGATATCAAATGTCGCGTACAACATT
GTGAATGGCCAGTGCACTCCAGTCCATGATCAGTCTGCTCCAGTCTACATAACCATCGGA
GATGGAGGAAACCAGGAAGGACTGGCCACCAACATGACGGCGCCGCAGCCTGGCTACTCG
GCCTTCAGGGAGTCGAGCTTCGGGCACGCCATCCTGGACATCAAGAACAGGACGCACGCG
TACTACACGTGGCACCGCAACCAGGACGGCAACGCTGTGGCGGCTGACTCCATGTGGTTC
ACCAACAGATACTGGCAGCCGACGGATGAATCTTTGGACGACTCCCAGTGATCTGAGTCG
TTCGTACATGGTTTACTCACACCTGCTCCTCCTCCCTAGTTTGTGTTGTGGTTCTTCTAC
GTGAATAAGCACTGGCTCGATTTGAACACACAGGACGGACTCACGGACGCCTCCGGTTCA
GGCGTCGTGATCTAGGTGGTTCTTTCTCCGCTCCAGCTCCCTCGTGGCCGTGTGCTGCTT
GTGTATAGAAGAAGCGCAGCTCACGTGCAGCGAGAGGAAAAGAAAGCTGAGAAATTGCGA
GTTGATACTTGATAGGCTTGTGTACGTTCGTACTCGTCTAGATGTTGAATAAACACATTG
GTTTCGTGGCGTTGCGACTTGC