Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0775300-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:32773565:32783571:-1 gene:Os01g0775300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:single domain MDC protein 1, single MATH domain containing protein 1 description:MATH domain containing protein. (Os01t0775300-01)
Sequence	CGCCGCCGCCGCCGCCGCCGCCGCCGCAGTAGAGTCTGCAGCAGCCGCAGCCGCCGCCGA CGCGGCGGCTCTCTCTGCTCGCCATCCGCGTCCGGCGTACCGGCTGCCGACGCAGATCCG AAGTCAGGCTCTGTACGGTTCTACGATTATTTGATGGAGCATGATATGACAGTTGAAGAT TTTATTAGAACTAATGGGTTAGGGGCAAGTGGATTGATAGAGACCAATAATCAAGGTGTA TCCACTTCTTCTGTGTCTGATTGTCGGTCCTGCGAGCATGTCGAGAATGGGAGCCCTTCC ACGGCCCCTCCCTTTTGGGACTCTGATGGTGAAGATGACGATCCTGTTACCTCAGGGCCT AGACCTTCAGATTTATTTGGGCGATATACTTGGAGAATTGAAAACTTTTCAAAGGAGAAA AAAAGAGAAATGAAAAGCGAACCATTTGAAGCTGGTGGTTACAAATGGTACATTCTAGTT TACCCTCAAGGATGTGATGTCTCCAATCACTTGTCATTATTTCTATGTGTTGCTAATCAT GACAAACTTCTCCCAGGATGGAGCCATTTCGCACAGTTTACTATAGCTGTGGGTAATCTT GATCCAAAGAAAGTTAAATATTCAGACACCCTGCACAAATTCTGGAAGAAAGAACATGAC TGGGGATGGAAAAAATTTATGGAGTTGTCAAAAATCCAAGATGGTTTCCTTGTTGATGAT GTTCTTGAAATCATTGCTCAAGTTCAAGTTATCAGGGAGAAAGTGGATCGCCCATTTCGT TGCCTCGATCGCCCTTATCGACGAGAATTACTCCGTGTCTATATGACCAATATAGAGCAA ATTTACCGACGCTTTGTTGAAGAGCGCAGAAGTAAACTTTGCAAGCTCATTGAGGACAAA ATGAGATGGTCCAGTTTCCGTGCCTTCTGGCTTGCAATTGACCAAAGCACAAGGCATCGC ATGTCGACAGAGAAGAGTGATGTCATACTGAAAATAATAGTGAAACATTTCTTTGTGGAG AAAGAAGTAACTTCAACGTTAGTTATGGACTCTCTGTATACGGGGTTGAAGGCGCTCGAG TGCCAGAGCAAGAGCAAGAGCAAGAAAGGCATAATAGACTCAGTGGATTTTGTAGAGCTG CCAGTGCCTATGGTCCATGTTGATGTGGACATGTTTGTTTTGGCTGGTGATGTCATAGCT TTGCTTGAGAGGGCAGCTTTAGAACCCTTGCCTTGTCAGCCTGTGTCTCCAAAGGATGAC AAATGTTCCCAGAGCCGCACTAAGGATGGCAGTTCTGGAGAAGTTAACAAAGTTTCGATT GAACGTGAAGAAAGGCGCCTAACTGAACTTGGTCAGAAGATAATTGAAACATTTGCACTA TCCCATATATTCAGTGGGATTGAGGTTGCCTATCAAGAAGCTGTTGCTTTGAAGAGGCAA GAGGAGCTTATTCGCGAAGAGGAAGAAGCCTGGCTACTTGAAAATGAGATGAAGGGGAAG CGTGGCAGTACCACTGAAAAGGATAAACGTGCAAAGAAAAAACAGGCAAAGCAGAAGAAG AACAATCGTAAGGTTAAAGACAAAGATAGAGAAGAAAAATGTGATTCAAATTTTCCAGAA AGAAGTCAAGATGAAAACACAATTCATGACAGGGAAGACTCTAAACAGGCAGGACAAATA TCCATGAAAGTAGATACCTCTGAAGAAGGTGCCTCAGATGTTTCAGACAATTTAGATGGG TCAATTGAGATTCAGAAGAAACATTCTACTATGGAGAATAAGTCATTGTCATGTTCATCT GAGTCTGCTACTATGAACAATGCGCAAGGCAAAATAAATAACTTGTTAGAAAGTAAAGAT CAGATATCACGCAACAGAGGGAAAGCTCGCAGCAGGAGCACAAGCAATATGAACATTACC GAGGATGTGGATGATCTTCCATCAAGCACGACTAGCTCAGACAGGAATACATCTGGCTGT GGCCCAGCTCCAAAGCTTGATCAAGAGACTGTTCTACTTACCTTGAAAGATAGGCTTCGG AAACTTGGGCAACGTTTACATGAGAAGGAAATTGAGGGCAGGAAACTACTCCAGGCTCAT TTGGAAAAGAAGGCAGCAGCTGAGTCAGCAACTGGTTCATCCTCATCACTCTCATCCAAT TCTTTAGAAGAGACTCCAGAGGTTCTGAAGAGCCCAGATCAATCTTCAGTAACTATCTCT GATGCTGATATTAATGCATCACCTTCAAAGTTTGGTGCCAGTAAAGAAGTCACTCCAGTA ACACCAACCACCATCCTAAGCACTGAGCCTGTGCCTACTGTTGCTTCCACCCTGAGTAAA GATGAGCCAGTTTTGTGTGAAGATCATGTATCATGTTCAACTCCACAAATTGATACTCCA ATCACCTCAAATCCACCGCAAGTTGTTAAAACTGTTACCCTTCCTTCAGGCATGCTGCTT GTTGGTCACGCTATTCAAGCACCGTCTAGATCACCGGCACCACAGGTTGATAGGGTCTCT AAAGCTATTGCTGCTCCCACCAAATCACCTGCTCCACAGGTTGATAAGGTCTCTATAGCT GTTCCGACTCCCTCAAAATCACCTGCTACACAGGGTGAGAAAGTCGCTAAAGCTATTCTG GTGCCCCCAAAATCACTTGCTCCACAAGTTGGAAAGGTTGCTAAAACCATCCCGACACCA AAACAACCTGCACCTCTGGTTGACAAGGTTACGTCACTTGACCCTGTATCAAAGCAAATG TCTTCCATGTCTAATTCAGAAGCCCGAGAAGCTATTCTTCCCAAAAAGGCTGCAGTCCTG TCTGTTTCCCAAACTCCTGCAATATCGAGGCCTTCAAGTGCTCCTCTGTTCCAGGTACCA AGATCAACTTTACCACCTACGCCAGCAGTTCAAGTTCCCCCAATGCTTTCCCGCTCAATG ACCCTGGCTGGACGATCGAGGAATGAACCATCCCCTTCTGTTCCAAGTTATACAGCACAG ACCTACCGAAATGCCATCATTGGTAAGAGTAATCTTGATACAGCATCAGCAAGTCTTGAT CATTCAACTTCTTTTGGCCAAAACGTCGCACTTTCACAGCCACTATCATCGTATGCATCA GCAGCATCTGCCATGGTACCTCCGGTCGGAAGGAATGGCCAATTACCAGGTAAACAGGGC TTCATGTTTGGGCAAGGAAAGTCCGAAGCAATTGATAACTGGAACCCATGGAAAGGTGAT AGTAATGCTAACAAATACATGTGGAAAGATGATTCTCCTTACCATCAAATGACCAAGGGT GATGCACATACTCAATCTTGGAGGGACAATTCTTATCAGCAAGCAGGATGCAGTGGAACA GGGGAACAAGGCGAATTTGGGGGGCTTCAATATAGGCAGTTCCAGAGGGAGATTCCAACA AACCTTGTCTCATACCAATTGCCAGGGCCAGTTGGAGAAGAATTTCCACACCTTGATATC ATCAATGACTTGCTTGAGGAGGAACAAAGCAGTGGGAGTATGGCAGAGCCTACCCTCCAC GGATATCATACATTGGGCTTGCCGTATTCTTCCAGAGGAAACTTAGTAGACTCTGAAGTG ACTTCCATAAGTAGTTCTGGCCGGTTAAACTTGGCCGATCATTACTATGACGAGGGCTAC CCGATGGCTTATGACAGGCTGAATGCTCTTTATAGGTTAAGAGAAGGGCAAAATTCCACA TTGGATGCTTATTCCAATGGAAGGATGGACTCGATTACTTCAAAACCTTGGCTACATAAC TTCTCAAATCCAGCAGTGAACCTTGGAGTTAACCCAAATGGATTTTCACAGCAAATGGGG AACTACACCAATTTAGGGAGTGGGAGGGTGAATGGAGAACATCTGTATCGCCATGCCAAC GGGCAATGGTGA

Peptide Sequence

PEP ID	Os01t0775300-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:32773565:32783571:-1 gene:Os01g0775300 transcript:Os01t0775300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:single domain MDC protein 1, single MATH domain containing protein 1 description:MATH domain containing protein. (Os01t0775300-01)
Sequence	RRRRRRRRRSRVCSSRSRRRRGGSLCSPSASGVPAADADPKSGSVRFYDYLMEHDMTVED FIRTNGLGASGLIETNNQGVSTSSVSDCRSCEHVENGSPSTAPPFWDSDGEDDDPVTSGP RPSDLFGRYTWRIENFSKEKKREMKSEPFEAGGYKWYILVYPQGCDVSNHLSLFLCVANH DKLLPGWSHFAQFTIAVGNLDPKKVKYSDTLHKFWKKEHDWGWKKFMELSKIQDGFLVDD VLEIIAQVQVIREKVDRPFRCLDRPYRRELLRVYMTNIEQIYRRFVEERRSKLCKLIEDK MRWSSFRAFWLAIDQSTRHRMSTEKSDVILKIIVKHFFVEKEVTSTLVMDSLYTGLKALE CQSKSKSKKGIIDSVDFVELPVPMVHVDVDMFVLAGDVIALLERAALEPLPCQPVSPKDD KCSQSRTKDGSSGEVNKVSIEREERRLTELGQKIIETFALSHIFSGIEVAYQEAVALKRQ EELIREEEEAWLLENEMKGKRGSTTEKDKRAKKKQAKQKKNNRKVKDKDREEKCDSNFPE RSQDENTIHDREDSKQAGQISMKVDTSEEGASDVSDNLDGSIEIQKKHSTMENKSLSCSS ESATMNNAQGKINNLLESKDQISRNRGKARSRSTSNMNITEDVDDLPSSTTSSDRNTSGC GPAPKLDQETVLLTLKDRLRKLGQRLHEKEIEGRKLLQAHLEKKAAAESATGSSSSLSSN SLEETPEVLKSPDQSSVTISDADINASPSKFGASKEVTPVTPTTILSTEPVPTVASTLSK DEPVLCEDHVSCSTPQIDTPITSNPPQVVKTVTLPSGMLLVGHAIQAPSRSPAPQVDRVS KAIAAPTKSPAPQVDKVSIAVPTPSKSPATQGEKVAKAILVPPKSLAPQVGKVAKTIPTP KQPAPLVDKVTSLDPVSKQMSSMSNSEAREAILPKKAAVLSVSQTPAISRPSSAPLFQVP RSTLPPTPAVQVPPMLSRSMTLAGRSRNEPSPSVPSYTAQTYRNAIIGKSNLDTASASLD HSTSFGQNVALSQPLSSYASAASAMVPPVGRNGQLPGKQGFMFGQGKSEAIDNWNPWKGD SNANKYMWKDDSPYHQMTKGDAHTQSWRDNSYQQAGCSGTGEQGEFGGLQYRQFQREIPT NLVSYQLPGPVGEEFPHLDIINDLLEEEQSSGSMAEPTLHGYHTLGLPYSSRGNLVDSEV TSISSSGRLNLADHYYDEGYPMAYDRLNALYRLREGQNSTLDAYSNGRMDSITSKPWLHN FSNPAVNLGVNPNGFSQQMGNYTNLGSGRVNGEHLYRHANGQW

Transcript Sequence

Transcript ID	Os01t0775300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32773565:32783571:-1 gene:Os01g0775300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:single domain MDC protein 1, single MATH domain containing protein 1 description:MATH domain containing protein. (Os01t0775300-01)
Sequence	GCCGCCGCCGCCGCCGCCGCCGCCGCCGCAGTAGAGTCTGCAGCAGCCGCAGCCGCCGCC GACGCGGCGGCTCTCTCTGCTCGCCATCCGCGTCCGGCGTACCGGCTGCCGACGCAGATC CGAAGTCAGGCTCTGTACGGTTCTACGATTATTTGATGGAGCATGATATGACAGTTGAAG ATTTTATTAGAACTAATGGGTTAGGGGCAAGTGGATTGATAGAGACCAATAATCAAGGTG TATCCACTTCTTCTGTGTCTGATTGTCGGTCCTGCGAGCATGTCGAGAATGGGAGCCCTT CCACGGCCCCTCCCTTTTGGGACTCTGATGGTGAAGATGACGATCCTGTTACCTCAGGGC CTAGACCTTCAGATTTATTTGGGCGATATACTTGGAGAATTGAAAACTTTTCAAAGGAGA AAAAAAGAGAAATGAAAAGCGAACCATTTGAAGCTGGTGGTTACAAATGGTACATTCTAG TTTACCCTCAAGGATGTGATGTCTCCAATCACTTGTCATTATTTCTATGTGTTGCTAATC ATGACAAACTTCTCCCAGGATGGAGCCATTTCGCACAGTTTACTATAGCTGTGGGTAATC TTGATCCAAAGAAAGTTAAATATTCAGACACCCTGCACAAATTCTGGAAGAAAGAACATG ACTGGGGATGGAAAAAATTTATGGAGTTGTCAAAAATCCAAGATGGTTTCCTTGTTGATG ATGTTCTTGAAATCATTGCTCAAGTTCAAGTTATCAGGGAGAAAGTGGATCGCCCATTTC GTTGCCTCGATCGCCCTTATCGACGAGAATTACTCCGTGTCTATATGACCAATATAGAGC AAATTTACCGACGCTTTGTTGAAGAGCGCAGAAGTAAACTTTGCAAGCTCATTGAGGACA AAATGAGATGGTCCAGTTTCCGTGCCTTCTGGCTTGCAATTGACCAAAGCACAAGGCATC GCATGTCGACAGAGAAGAGTGATGTCATACTGAAAATAATAGTGAAACATTTCTTTGTGG AGAAAGAAGTAACTTCAACGTTAGTTATGGACTCTCTGTATACGGGGTTGAAGGCGCTCG AGTGCCAGAGCAAGAGCAAGAGCAAGAAAGGCATAATAGACTCAGTGGATTTTGTAGAGC TGCCAGTGCCTATGGTCCATGTTGATGTGGACATGTTTGTTTTGGCTGGTGATGTCATAG CTTTGCTTGAGAGGGCAGCTTTAGAACCCTTGCCTTGTCAGCCTGTGTCTCCAAAGGATG ACAAATGTTCCCAGAGCCGCACTAAGGATGGCAGTTCTGGAGAAGTTAACAAAGTTTCGA TTGAACGTGAAGAAAGGCGCCTAACTGAACTTGGTCAGAAGATAATTGAAACATTTGCAC TATCCCATATATTCAGTGGGATTGAGGTTGCCTATCAAGAAGCTGTTGCTTTGAAGAGGC AAGAGGAGCTTATTCGCGAAGAGGAAGAAGCCTGGCTACTTGAAAATGAGATGAAGGGGA AGCGTGGCAGTACCACTGAAAAGGATAAACGTGCAAAGAAAAAACAGGCAAAGCAGAAGA AGAACAATCGTAAGGTTAAAGACAAAGATAGAGAAGAAAAATGTGATTCAAATTTTCCAG AAAGAAGTCAAGATGAAAACACAATTCATGACAGGGAAGACTCTAAACAGGCAGGACAAA TATCCATGAAAGTAGATACCTCTGAAGAAGGTGCCTCAGATGTTTCAGACAATTTAGATG GGTCAATTGAGATTCAGAAGAAACATTCTACTATGGAGAATAAGTCATTGTCATGTTCAT CTGAGTCTGCTACTATGAACAATGCGCAAGGCAAAATAAATAACTTGTTAGAAAGTAAAG ATCAGATATCACGCAACAGAGGGAAAGCTCGCAGCAGGAGCACAAGCAATATGAACATTA CCGAGGATGTGGATGATCTTCCATCAAGCACGACTAGCTCAGACAGGAATACATCTGGCT GTGGCCCAGCTCCAAAGCTTGATCAAGAGACTGTTCTACTTACCTTGAAAGATAGGCTTC GGAAACTTGGGCAACGTTTACATGAGAAGGAAATTGAGGGCAGGAAACTACTCCAGGCTC ATTTGGAAAAGAAGGCAGCAGCTGAGTCAGCAACTGGTTCATCCTCATCACTCTCATCCA ATTCTTTAGAAGAGACTCCAGAGGTTCTGAAGAGCCCAGATCAATCTTCAGTAACTATCT CTGATGCTGATATTAATGCATCACCTTCAAAGTTTGGTGCCAGTAAAGAAGTCACTCCAG TAACACCAACCACCATCCTAAGCACTGAGCCTGTGCCTACTGTTGCTTCCACCCTGAGTA AAGATGAGCCAGTTTTGTGTGAAGATCATGTATCATGTTCAACTCCACAAATTGATACTC CAATCACCTCAAATCCACCGCAAGTTGTTAAAACTGTTACCCTTCCTTCAGGCATGCTGC TTGTTGGTCACGCTATTCAAGCACCGTCTAGATCACCGGCACCACAGGTTGATAGGGTCT CTAAAGCTATTGCTGCTCCCACCAAATCACCTGCTCCACAGGTTGATAAGGTCTCTATAG CTGTTCCGACTCCCTCAAAATCACCTGCTACACAGGGTGAGAAAGTCGCTAAAGCTATTC TGGTGCCCCCAAAATCACTTGCTCCACAAGTTGGAAAGGTTGCTAAAACCATCCCGACAC CAAAACAACCTGCACCTCTGGTTGACAAGGTTACGTCACTTGACCCTGTATCAAAGCAAA TGTCTTCCATGTCTAATTCAGAAGCCCGAGAAGCTATTCTTCCCAAAAAGGCTGCAGTCC TGTCTGTTTCCCAAACTCCTGCAATATCGAGGCCTTCAAGTGCTCCTCTGTTCCAGGTAC CAAGATCAACTTTACCACCTACGCCAGCAGTTCAAGTTCCCCCAATGCTTTCCCGCTCAA TGACCCTGGCTGGACGATCGAGGAATGAACCATCCCCTTCTGTTCCAAGTTATACAGCAC AGACCTACCGAAATGCCATCATTGGTAAGAGTAATCTTGATACAGCATCAGCAAGTCTTG ATCATTCAACTTCTTTTGGCCAAAACGTCGCACTTTCACAGCCACTATCATCGTATGCAT CAGCAGCATCTGCCATGGTACCTCCGGTCGGAAGGAATGGCCAATTACCAGGTAAACAGG GCTTCATGTTTGGGCAAGGAAAGTCCGAAGCAATTGATAACTGGAACCCATGGAAAGGTG ATAGTAATGCTAACAAATACATGTGGAAAGATGATTCTCCTTACCATCAAATGACCAAGG GTGATGCACATACTCAATCTTGGAGGGACAATTCTTATCAGCAAGCAGGATGCAGTGGAA CAGGGGAACAAGGCGAATTTGGGGGGCTTCAATATAGGCAGTTCCAGAGGGAGATTCCAA CAAACCTTGTCTCATACCAATTGCCAGGGCCAGTTGGAGAAGAATTTCCACACCTTGATA TCATCAATGACTTGCTTGAGGAGGAACAAAGCAGTGGGAGTATGGCAGAGCCTACCCTCC ACGGATATCATACATTGGGCTTGCCGTATTCTTCCAGAGGAAACTTAGTAGACTCTGAAG TGACTTCCATAAGTAGTTCTGGCCGGTTAAACTTGGCCGATCATTACTATGACGAGGGCT ACCCGATGGCTTATGACAGGCTGAATGCTCTTTATAGGTTAAGAGAAGGGCAAAATTCCA CATTGGATGCTTATTCCAATGGAAGGATGGACTCGATTACTTCAAAACCTTGGCTACATA ACTTCTCAAATCCAGCAGTGAACCTTGGAGTTAACCCAAATGGATTTTCACAGCAAATGG GGAACTACACCAATTTAGGGAGTGGGAGGGTGAATGGAGAACATCTGTATCGCCATGCCA ACGGGCAATGGTGATGCCTGTACACAATTGATAATAAATCCTGCTATAAGTTGTCACAGA CCATGGTGGCAGATGTAAGCGTCGCCATGGCCACCAGGTTGTAACTTTTAATTTTAAAGG GGCAAAGAAATAATACATTGTGTAAAGCATTCCAGTGTCCGTTAAATTTTCTGTCGGCTG CTTTC