Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0773600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:32699034:32708541:1 gene:Os01g0773600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 47 protein. (Os01t0773600-01)
Sequence	ATGCCCACCTCGGGCCCGGACGCGATGCAGCCGGCGCTGCGACGGCGGCGGCGGCGCCAA GGCTTCCTCCTCCCCTTCGCCTGCCTCTCCGCCGCCCTCATCGCCGCTGCCCTGCTCCCC GGCGCCGCTTTCGCCGATGGCGTCACGCCCTCCGAGGCCCGCCGGCTCCGCGACGAGGTC AAAGATATGTTCTATCATGCATTTGATGGGTACATGCAACATGCTTTTCCACTTGATGAA TTGCGGCCTTTAAGTTGCCAAGGAGAAGATTCACTTGGTGGCTATGCACTTACTCTTATA GACTCTTTGGATACCTTGGCTTTACTAGGGGATAAGGAGAGATTTGATGCTGCCGTGGAG TGGGTTGGTAAGAATGTCCGCTTTGATATTAATAAAACTGTCTCTGTTTTTGAAACCAAC ATACGCATTCTTGGGGGTCTGCTATCAGCTCACCTGATTGCCAGTGATTATGCAACTGGA ATGAGAATTCAATCTTATGATGATCAGTTGCTTCATTTAGCGGCTGACTTAGCTCAAAGA TTGCTACCTGCATTTGACACTCCAACAGGTATTCCATTTGGATCAGTAAATTTATTGTAT GGAGTCGATGAAAATGAAAGCAAGATAACTTCAACAGCTGGTGGTGGCACTTTGACACTG GAATTTGGTGTCCTGAGTCGTTTGACTAATGATAGCGTTTATGAACGAGTTACAAAAAAC TCTGTGCGTGGAATATGGGCACGCAGGTCGAAACTTGACCTTGTTGGTGCCCATATAAAT GTATTTACTGGTGAATGGACACAGAAGGATGCAGGAATTGGCACAAGCATTGACTCATTC TATGAGTATCTTCTAAAGGCGTATTTATTATTTGGAGATGAAGAATATTTGTATATATTT CAGGAGGCTTACAAGGCTGCCATGCATTATCTCCATCATGATCCCTGGTATGTGGAGGTA AATATGAATTCTGGTGCTACTGTTTGGCCACTATTCAACAGTCTCCAGGCATTCTGGCCA GGACTTCAGGTGTTAGCTGGAGATGTTGATCCTGCCATTCGAACTCATGCTGCCTTCTTC AGTGTATGGAAAAAATATGGCTTCACCCCAGAAGGGTTTAATCTTGCTACATCCACTGTT CAGAATGGACAAAGGAGCTACCCGCTGCGGCCTGAATTGATTGAAAGCACATATTGGCTG TTCAAGGCTACTAGAGATTATAGGTACCTTGATGTTGGAAGGGATATATTAGCAAGCCTT CAATATGGTGCTAAATGTCCATGTGGTTACTGCCATATTTCAGATGTAGAAACCCACCAG CAGGATGACCACATGGAGAGTTTTTTCCTTGCAGAAACAGTCAAATATCTCTGGCTTCTT TTTGATTTAGCTGCAGGCCCTGATAATATTGTTGAAAATGGGCCATATAAATACATATTT AGTACAGAAGGTCATCTGTTGCCTGCTACTCCTCAGATAACCTTGTTAGATGAGCATTGC TTGTATGCTGGAGCATTCTGCAATGGTACTGCAGGCCATGGATATGGTACCGGTGATAGT TCTAATAAGCATCAAAATGCAAACTCTGTTCCGTTCGATGATAGTCGAACACCTTCCGAT CAATCTTTATCCAATATTTTGTCTACGACAAGAGGGTACATCAAGGGAGTTTGTCCAGGA TTAACTCATGCCCAGAAACTTGGCATATCATACTCTGCCGAGGAGGATAACTCAATACAG CAGAATTCTGGAAGTAGTGAGAATCTTGATGAATCACACGTGATCAAATCCAGTGTCCAA GCTCAATCAAGTTCTGTTATATTGATATCGCATCCAGTCGCAAGCCAAACTGAGGAGCCT ACGTCGGGCAGAAGTCAGTACAATGCAAACATTGTGGCAACTGCTGAGTCTGTAGGGACT GATACTGCCGGCGCCTCATCCCACCCCGAGGATCTTGTTAAGGAAACTGAGAGCGTCTCT GAACAGAAAGAAATCAATGACAAAGAGATCGCTTCTCAGGGTAGTCAACCGACCGAAGGA AGATACCTGACCTAA

Peptide Sequence

PEP ID	Os01t0773600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:32699034:32708541:1 gene:Os01g0773600 transcript:Os01t0773600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 47 protein. (Os01t0773600-01)
Sequence	MPTSGPDAMQPALRRRRRRQGFLLPFACLSAALIAAALLPGAAFADGVTPSEARRLRDEV KDMFYHAFDGYMQHAFPLDELRPLSCQGEDSLGGYALTLIDSLDTLALLGDKERFDAAVE WVGKNVRFDINKTVSVFETNIRILGGLLSAHLIASDYATGMRIQSYDDQLLHLAADLAQR LLPAFDTPTGIPFGSVNLLYGVDENESKITSTAGGGTLTLEFGVLSRLTNDSVYERVTKN SVRGIWARRSKLDLVGAHINVFTGEWTQKDAGIGTSIDSFYEYLLKAYLLFGDEEYLYIF QEAYKAAMHYLHHDPWYVEVNMNSGATVWPLFNSLQAFWPGLQVLAGDVDPAIRTHAAFF SVWKKYGFTPEGFNLATSTVQNGQRSYPLRPELIESTYWLFKATRDYRYLDVGRDILASL QYGAKCPCGYCHISDVETHQQDDHMESFFLAETVKYLWLLFDLAAGPDNIVENGPYKYIF STEGHLLPATPQITLLDEHCLYAGAFCNGTAGHGYGTGDSSNKHQNANSVPFDDSRTPSD QSLSNILSTTRGYIKGVCPGLTHAQKLGISYSAEEDNSIQQNSGSSENLDESHVIKSSVQ AQSSSVILISHPVASQTEEPTSGRSQYNANIVATAESVGTDTAGASSHPEDLVKETESVS EQKEINDKEIASQGSQPTEGRYLT

Transcript Sequence

Transcript ID	Os01t0773600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32699034:32708541:1 gene:Os01g0773600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycoside hydrolase, family 47 protein. (Os01t0773600-01)
Sequence	GCGTGCTCTGTATCATTATTACCATCCCGATGCCCACCTCGGGCCCGGACGCGATGCAGC CGGCGCTGCGACGGCGGCGGCGGCGCCAAGGCTTCCTCCTCCCCTTCGCCTGCCTCTCCG CCGCCCTCATCGCCGCTGCCCTGCTCCCCGGCGCCGCTTTCGCCGATGGCGTCACGCCCT CCGAGGCCCGCCGGCTCCGCGACGAGGTCAAAGATATGTTCTATCATGCATTTGATGGGT ACATGCAACATGCTTTTCCACTTGATGAATTGCGGCCTTTAAGTTGCCAAGGAGAAGATT CACTTGGTGGCTATGCACTTACTCTTATAGACTCTTTGGATACCTTGGCTTTACTAGGGG ATAAGGAGAGATTTGATGCTGCCGTGGAGTGGGTTGGTAAGAATGTCCGCTTTGATATTA ATAAAACTGTCTCTGTTTTTGAAACCAACATACGCATTCTTGGGGGTCTGCTATCAGCTC ACCTGATTGCCAGTGATTATGCAACTGGAATGAGAATTCAATCTTATGATGATCAGTTGC TTCATTTAGCGGCTGACTTAGCTCAAAGATTGCTACCTGCATTTGACACTCCAACAGGTA TTCCATTTGGATCAGTAAATTTATTGTATGGAGTCGATGAAAATGAAAGCAAGATAACTT CAACAGCTGGTGGTGGCACTTTGACACTGGAATTTGGTGTCCTGAGTCGTTTGACTAATG ATAGCGTTTATGAACGAGTTACAAAAAACTCTGTGCGTGGAATATGGGCACGCAGGTCGA AACTTGACCTTGTTGGTGCCCATATAAATGTATTTACTGGTGAATGGACACAGAAGGATG CAGGAATTGGCACAAGCATTGACTCATTCTATGAGTATCTTCTAAAGGCGTATTTATTAT TTGGAGATGAAGAATATTTGTATATATTTCAGGAGGCTTACAAGGCTGCCATGCATTATC TCCATCATGATCCCTGGTATGTGGAGGTAAATATGAATTCTGGTGCTACTGTTTGGCCAC TATTCAACAGTCTCCAGGCATTCTGGCCAGGACTTCAGGTGTTAGCTGGAGATGTTGATC CTGCCATTCGAACTCATGCTGCCTTCTTCAGTGTATGGAAAAAATATGGCTTCACCCCAG AAGGGTTTAATCTTGCTACATCCACTGTTCAGAATGGACAAAGGAGCTACCCGCTGCGGC CTGAATTGATTGAAAGCACATATTGGCTGTTCAAGGCTACTAGAGATTATAGGTACCTTG ATGTTGGAAGGGATATATTAGCAAGCCTTCAATATGGTGCTAAATGTCCATGTGGTTACT GCCATATTTCAGATGTAGAAACCCACCAGCAGGATGACCACATGGAGAGTTTTTTCCTTG CAGAAACAGTCAAATATCTCTGGCTTCTTTTTGATTTAGCTGCAGGCCCTGATAATATTG TTGAAAATGGGCCATATAAATACATATTTAGTACAGAAGGTCATCTGTTGCCTGCTACTC CTCAGATAACCTTGTTAGATGAGCATTGCTTGTATGCTGGAGCATTCTGCAATGGTACTG CAGGCCATGGATATGGTACCGGTGATAGTTCTAATAAGCATCAAAATGCAAACTCTGTTC CGTTCGATGATAGTCGAACACCTTCCGATCAATCTTTATCCAATATTTTGTCTACGACAA GAGGGTACATCAAGGGAGTTTGTCCAGGATTAACTCATGCCCAGAAACTTGGCATATCAT ACTCTGCCGAGGAGGATAACTCAATACAGCAGAATTCTGGAAGTAGTGAGAATCTTGATG AATCACACGTGATCAAATCCAGTGTCCAAGCTCAATCAAGTTCTGTTATATTGATATCGC ATCCAGTCGCAAGCCAAACTGAGGAGCCTACGTCGGGCAGAAGTCAGTACAATGCAAACA TTGTGGCAACTGCTGAGTCTGTAGGGACTGATACTGCCGGCGCCTCATCCCACCCCGAGG ATCTTGTTAAGGAAACTGAGAGCGTCTCTGAACAGAAAGAAATCAATGACAAAGAGATCG CTTCTCAGGGTAGTCAACCGACCGAAGGAAGATACCTGACCTAATGTAGGAACGAAAACT TTCACTTAAACTGGATACCATCATTTCAGGGCTTACCATATTACAAGTCTGCACGTCAGG TTACAAAACAACAAGTGTTGATACAAGGCCCATAGATCAGTACCTCCTGACCACAGTTGA ATTATAGTGAAAATGAAAAATCTCGCAATGGGACTACCCTTGAGTGGATCTGTGGTCTCG ATACACAACATTTGGATTTACCACAAGGCATCAGCTGTGTTCTTTCTGACAAATTTAGAA CGAGCATTCCTTGATTCATTCTGTTTGTAACTTTGTACTGGTCCGATAGATTCTTCTGAT CAAATAGCGGCTGTATAGTATTGTACACTAGAGCAATCAACAAACTGAATGTCCAAATGA CTCATACATGGGCCAGATTCCATCC