Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0769000-02
CDS Infomation	cds chromosome:IRGSP-1.0:1:32436952:32439421:1 gene:Os01g0769000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase II-associated protein PAT1 domain containing protein. (Os01t0769000-01);Similar to predicted protein. (Os01t0769000-02)
Sequence	TATACTGCTCAAGGCCTTACACGTCATGGGAGCATTCCATCAGTTGGTGCTGGTCTACAA ATGGGTTCTCCAAGCATGTCACTTCCAAGTTCTTCATATCATATGGCTGGACTATCTCAT GGACTACCATATGGAGGGAGCGTGTCCTTTGGTTCTCCAAATCTTCCTGGAAGCAATCCA ATACAAAATGATTGGCCAAACCAAGCCAACCCGTATGCTGTGGATCAATTTAATCTACTT CCGAACATGTTACAGAAACAAATATCACTTCCAAATAGCCCAATGTCATCACTGCTATTT TCTCAACAGCAGCAGAGATTGGCACAAGTTCAAGTCCAGCCATCCCATCAGAATTACCTA AATTTACCACCTCACCTATTTTACCAACATCACTCCCCAGAGTTAACAGGAAGGTTTGAT TCTATCAGCAATGTTCCTTCATTGAGAGACAAGAGGTCAAGGTCAGGAAGGGGAAAACAC AGCACACGTTTTTCTCAACCATTGACTGATACTGGTAGTCAAAATGGTGATAGTGGTGGA CTAAAATTCAGGTCTAAGTACATGTCATCTGAAGAGATCGAATCTATCTTAAGAATGCAG CATTCAGCAAGTCACAGCAGTGATCCTTATGTAGTTGATTATTACCATCAAGCTTGCATA GCAAAAAAGGGTGCCAGTTCCAGGCAAAAGGCCAATTTTGCCCCAACATCAATGAAAGAC TTACCTTCCAAGTCCAGATCTAGCAGTGACCATCATGCATATCTTCAGGTTGATGCTCTA GGGAGGGTTTCTTTCTCTTCCATACGTAGGCCTCGGTCTCTTCTTGAAGTTGACCTTCCT TCATCTGGTGATGGTTCTCATGATCAGAAGTCTTCTCTGAGGCCCCTGGAGAAAGAACCA ATGCTGGCAGCTAGAGTCACTGTTGAAGATGCCATCTGCCTACTTCTTGAGGTGGATGAT ATTGACCGTCTATTGCAGTCTAGCCAGGCACAAGATAACAGTTTCCAACTGAGGCGAAGA CGGCAGGTCCTCCTTGAAGGTCTAGCTACATCACTTCAGCTTGTTGACCCTCTTGGTCCG AGCAAATCAAGCCATTCATCTGGATTGGCCCCTAAGGATGATCTTGTTTTTCTTCGGATT GTTTCTCTTCCTAAAGGACGCAAACTTTTGTCACGGTACCTTCGACTTCTTACCCCTGGA AGCGAGTTGACCCGTATAATATGCATGGCTATTTTTCGACATCTGAGGTACTTGTTTGGG GGTTTACCATCAGATTCTAGTGCAGCAGAAACAACAGTTGCTCTTGCAAAGACTGTTTCA TCTTGTGTGCTCCATATGGAACTAGGTGCTCTTAGTGCTTGCCTTGCTGCTGTCGTATGT TCATCTGAGCAGCCACCTCTGCGTCCTCTTGCTAGCTCTGCTGGTGATGGGGCTTCTCTT ATTATTAAATCAGTACTGGACCGAGCAACCGAGTTGCTGACTGACCACCATGCTGCAGCC AGCTATACAGTGTCAAACCGAACTCTCTGGCAGGCATCATTTGATGCTTTCTTTGGACTC CTGACAAAATACTGCCTCAGTAAGTATGAAAGTATTAAGCAGATGTTTGTCATGCAGTCA CCATGCTCTGTAACTGGATCTGAAGTCTCGAAAGCAACCAGCAGGGAGATGCCAGTTGAG TTGCTACGTGCAAGCCTTCCTCATACAAACGATCAGCAACGCCAGCTGCTGCTTGATTTT GCTCAGCGAACAATGCCAGTGACCGGTATTAATCCCACTGGGGCAAATGGTGGGTACATC ACCTCTGAGTCTGTTCCTGGTTGA

Peptide Sequence

PEP ID	Os01t0769000-02
PEP Infomation	pep chromosome:IRGSP-1.0:1:32436952:32439421:1 gene:Os01g0769000 transcript:Os01t0769000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase II-associated protein PAT1 domain containing protein. (Os01t0769000-01);Similar to predicted protein. (Os01t0769000-02)
Sequence	YTAQGLTRHGSIPSVGAGLQMGSPSMSLPSSSYHMAGLSHGLPYGGSVSFGSPNLPGSNP IQNDWPNQANPYAVDQFNLLPNMLQKQISLPNSPMSSLLFSQQQQRLAQVQVQPSHQNYL NLPPHLFYQHHSPELTGRFDSISNVPSLRDKRSRSGRGKHSTRFSQPLTDTGSQNGDSGG LKFRSKYMSSEEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMKD LPSKSRSSSDHHAYLQVDALGRVSFSSIRRPRSLLEVDLPSSGDGSHDQKSSLRPLEKEP MLAARVTVEDAICLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLATSLQLVDPLGP SKSSHSSGLAPKDDLVFLRIVSLPKGRKLLSRYLRLLTPGSELTRIICMAIFRHLRYLFG GLPSDSSAAETTVALAKTVSSCVLHMELGALSACLAAVVCSSEQPPLRPLASSAGDGASL IIKSVLDRATELLTDHHAAASYTVSNRTLWQASFDAFFGLLTKYCLSKYESIKQMFVMQS PCSVTGSEVSKATSREMPVELLRASLPHTNDQQRQLLLDFAQRTMPVTGINPTGANGGYI TSESVPG

Transcript Sequence

Transcript ID	Os01t0769000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32436952:32439421:1 gene:Os01g0769000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Topoisomerase II-associated protein PAT1 domain containing protein. (Os01t0769000-01);Similar to predicted protein. (Os01t0769000-02)
Sequence	TTATACTGCTCAAGGCCTTACACGTCATGGGAGCATTCCATCAGTTGGTGCTGGTCTACA AATGGGTTCTCCAAGCATGTCACTTCCAAGTTCTTCATATCATATGGCTGGACTATCTCA TGGACTACCATATGGAGGGAGCGTGTCCTTTGGTTCTCCAAATCTTCCTGGAAGCAATCC AATACAAAATGATTGGCCAAACCAAGCCAACCCGTATGCTGTGGATCAATTTAATCTACT TCCGAACATGTTACAGAAACAAATATCACTTCCAAATAGCCCAATGTCATCACTGCTATT TTCTCAACAGCAGCAGAGATTGGCACAAGTTCAAGTCCAGCCATCCCATCAGAATTACCT AAATTTACCACCTCACCTATTTTACCAACATCACTCCCCAGAGTTAACAGGAAGGTTTGA TTCTATCAGCAATGTTCCTTCATTGAGAGACAAGAGGTCAAGGTCAGGAAGGGGAAAACA CAGCACACGTTTTTCTCAACCATTGACTGATACTGGTAGTCAAAATGGTGATAGTGGTGG ACTAAAATTCAGGTCTAAGTACATGTCATCTGAAGAGATCGAATCTATCTTAAGAATGCA GCATTCAGCAAGTCACAGCAGTGATCCTTATGTAGTTGATTATTACCATCAAGCTTGCAT AGCAAAAAAGGGTGCCAGTTCCAGGCAAAAGGCCAATTTTGCCCCAACATCAATGAAAGA CTTACCTTCCAAGTCCAGATCTAGCAGTGACCATCATGCATATCTTCAGGTTGATGCTCT AGGGAGGGTTTCTTTCTCTTCCATACGTAGGCCTCGGTCTCTTCTTGAAGTTGACCTTCC TTCATCTGGTGATGGTTCTCATGATCAGAAGTCTTCTCTGAGGCCCCTGGAGAAAGAACC AATGCTGGCAGCTAGAGTCACTGTTGAAGATGCCATCTGCCTACTTCTTGAGGTGGATGA TATTGACCGTCTATTGCAGTCTAGCCAGGCACAAGATAACAGTTTCCAACTGAGGCGAAG ACGGCAGGTCCTCCTTGAAGGTCTAGCTACATCACTTCAGCTTGTTGACCCTCTTGGTCC GAGCAAATCAAGCCATTCATCTGGATTGGCCCCTAAGGATGATCTTGTTTTTCTTCGGAT TGTTTCTCTTCCTAAAGGACGCAAACTTTTGTCACGGTACCTTCGACTTCTTACCCCTGG AAGCGAGTTGACCCGTATAATATGCATGGCTATTTTTCGACATCTGAGGTACTTGTTTGG GGGTTTACCATCAGATTCTAGTGCAGCAGAAACAACAGTTGCTCTTGCAAAGACTGTTTC ATCTTGTGTGCTCCATATGGAACTAGGTGCTCTTAGTGCTTGCCTTGCTGCTGTCGTATG TTCATCTGAGCAGCCACCTCTGCGTCCTCTTGCTAGCTCTGCTGGTGATGGGGCTTCTCT TATTATTAAATCAGTACTGGACCGAGCAACCGAGTTGCTGACTGACCACCATGCTGCAGC CAGCTATACAGTGTCAAACCGAACTCTCTGGCAGGCATCATTTGATGCTTTCTTTGGACT CCTGACAAAATACTGCCTCAGTAAGTATGAAAGTATTAAGCAGATGTTTGTCATGCAGTC ACCATGCTCTGTAACTGGATCTGAAGTCTCGAAAGCAACCAGCAGGGAGATGCCAGTTGA GTTGCTACGTGCAAGCCTTCCTCATACAAACGATCAGCAACGCCAGCTGCTGCTTGATTT TGCTCAGCGAACAATGCCAGTGACCGGTATTAATCCCACTGGGGCAAATGGTGGGTACAT CACCTCTGAGTCTGTTCCTGGTTGATATAGCTGAAGATGCCAAAGGGTCGATCGCAAATG CTTAAAAGGACTCGATGCACTTGTCTTGCAGATGGCAATTCATATATATCTGGAGACATG CATGCCCTTCATAAGATGTGAGCTTGGAAGAAAGTTCCATTTGCTCAGGGAAAAACTAGC CTTCTTCAGATTGTGACTTTAGGTTTCAGATTAATCTCGTAGACCAACGATCTCCCCTTT CTGTGGGTCATTTATATAGCACCCACCTGATATGCATATGTACGTACACTGTTGTAACAC TATGCTGTGATGAACTAGCCAACTCGTTGGGGGCAAAATTTAGTTTTTAACATTCATATT CCCCAGCGAAGAAGACGTCCAAGATTAGTGGGCTTAGCAGCAGTGGTTGTACAGGTACTA GGGCCTTCCTGTCTGTCGTTTTACTGGTGTGGAAGGTGCCTAGCGTCAAGTAAACACTAG TCTGGTCTTAATCTATTTTAGTCAGGACCAAAGTGTGTTGGAATAATGAAGTTCTGTTTA TTAGGTTTCTTGGAAGGATACTTAAAATGTCATGGAGATGCCTGTATTTCCAGGTGCCTA CTGACACTATATGGTGGGGTACTGGAAACTGGGGGTATATCTCTTAATTGTAAATCGTTA CAGTTTGTTG