Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0768300-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:32386510:32388520:-1 gene:Os01g0768300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0768300-00)
Sequence

ATGACGCAGACTCCCACCCCCGCTGCGGCCGCGCCGGCGCCGGCGGTGGCGGTGTCGGAG
GCGGGGCTGCCCGACGCCATCGCGGCCGCGCTGCCGCCGGACCCGTACGAGCAGCTGGAG
GTGGCGCGCAAGATCACGGCGGTGGCCGTGGCGGCCCGGGCGTCGCGCCTCGAGCTGGAG
GCCGCGCGGCTCCGCCAGAAGCTGGCCGACAAGGACCGCCTCGCCGCGGAGCTCGCCGAC
AGGGCCGCGTCGCTCGAGCAGGCGCTCCGTGACTCCGACGCCCGCCTCCGCGCCGCCCTC
GACGACAATGCTAAGCTTGCCAAGGAGAGAGACTCGCTCGCGCACACGTCCAAGAAACTG
GCCAGGGATCTCGCCAAGTTGGAAACCTTCAAGAGGCATCTAATGCAGTCATTGGGTGAT
GATAATCCCCCGATTCAGGAGACAGTGGACATAAGAACCTGCGAGCAATCGGTAGCGAAA
GCAAGTTCTTGGAAAGATGGAGTGGCACATAGTCGTCATCATCATCCTGTCTCCTCTCTT
GCTGATGGATCCACCGAAATTGAAAGCGTAAACCAGGAAGTGGCGAGACCGTTCGAGCAG
AAGCTCTCCGTCACCCACATCTCTCCGCGGCTCACGTCTGATCCCGCGGCGAAGACGAGA
ACTGCTGCCACTTCCCCGAGAAGATACTCCACCGCCGTGTCGCCTAAGCTGGCAGCCAGC
GCCACTTCGCCTCGGTTAGAAGGCCACATGGCGATGCAGCCATGGCTGCCCTCCAGCAAG
ATGTCCTCTGCTGCCAACTCGCCGCCTCGCGCCCACTCGATCTCAGGGCGCACGACGAGA
GTAGATGGCAAGGAGTTCTTTCGTCAGGCAAGGAATCGTCTCTCCTATGAACAATTCGCA
GCTTTTCTTGCCAATATCAAGGAGCTAAACGCTCACAGGCAATCCAGAGAGGAGACACTC
CAGAAAGCTGACGAGATCTTCGGTTCAGAGAACAAGGATCTCTTCATGTCGTTCCAGAGC
TTGCTTAGCCGTAGCCTGTCGTAG

Peptide Sequence

PEP ID

Os01t0768300-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:32386510:32388520:-1 gene:Os01g0768300 transcript:Os01t0768300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0768300-00)
Sequence

MTQTPTPAAAAPAPAVAVSEAGLPDAIAAALPPDPYEQLEVARKITAVAVAARASRLELE
AARLRQKLADKDRLAAELADRAASLEQALRDSDARLRAALDDNAKLAKERDSLAHTSKKL
ARDLAKLETFKRHLMQSLGDDNPPIQETVDIRTCEQSVAKASSWKDGVAHSRHHHPVSSL
ADGSTEIESVNQEVARPFEQKLSVTHISPRLTSDPAAKTRTAATSPRRYSTAVSPKLAAS
ATSPRLEGHMAMQPWLPSSKMSSAANSPPRAHSISGRTTRVDGKEFFRQARNRLSYEQFA
AFLANIKELNAHRQSREETLQKADEIFGSENKDLFMSFQSLLSRSLS

Transcript Sequence

Transcript ID

Os01t0768300-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:32386510:32388520:-1 gene:Os01g0768300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to predicted protein. (Os01t0768300-00)
Sequence

ATGACGCAGACTCCCACCCCCGCTGCGGCCGCGCCGGCGCCGGCGGTGGCGGTGTCGGAG
GCGGGGCTGCCCGACGCCATCGCGGCCGCGCTGCCGCCGGACCCGTACGAGCAGCTGGAG
GTGGCGCGCAAGATCACGGCGGTGGCCGTGGCGGCCCGGGCGTCGCGCCTCGAGCTGGAG
GCCGCGCGGCTCCGCCAGAAGCTGGCCGACAAGGACCGCCTCGCCGCGGAGCTCGCCGAC
AGGGCCGCGTCGCTCGAGCAGGCGCTCCGTGACTCCGACGCCCGCCTCCGCGCCGCCCTC
GACGACAATGCTAAGCTTGCCAAGGAGAGAGACTCGCTCGCGCACACGTCCAAGAAACTG
GCCAGGGATCTCGCCAAGTTGGAAACCTTCAAGAGGCATCTAATGCAGTCATTGGGTGAT
GATAATCCCCCGATTCAGGAGACAGTGGACATAAGAACCTGCGAGCAATCGGTAGCGAAA
GCAAGTTCTTGGAAAGATGGAGTGGCACATAGTCGTCATCATCATCCTGTCTCCTCTCTT
GCTGATGGATCCACCGAAATTGAAAGCGTAAACCAGGAAGTGGCGAGACCGTTCGAGCAG
AAGCTCTCCGTCACCCACATCTCTCCGCGGCTCACGTCTGATCCCGCGGCGAAGACGAGA
ACTGCTGCCACTTCCCCGAGAAGATACTCCACCGCCGTGTCGCCTAAGCTGGCAGCCAGC
GCCACTTCGCCTCGGTTAGAAGGCCACATGGCGATGCAGCCATGGCTGCCCTCCAGCAAG
ATGTCCTCTGCTGCCAACTCGCCGCCTCGCGCCCACTCGATCTCAGGGCGCACGACGAGA
GTAGATGGCAAGGAGTTCTTTCGTCAGGCAAGGAATCGTCTCTCCTATGAACAATTCGCA
GCTTTTCTTGCCAATATCAAGGAGCTAAACGCTCACAGGCAATCCAGAGAGGAGACACTC
CAGAAAGCTGACGAGATCTTCGGTTCAGAGAACAAGGATCTCTTCATGTCGTTCCAGAGC
TTGCTTAGCCGTAGCCTGTCGTAG