Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0765600-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:32258915:32260026:-1 gene:Os01g0765600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os01t0765600-01)
Sequence	ATGGCGGGCGTCGAGGTCTCCAAGCCGTCGAGGCGCCTGTCGCCGAAGGGGAGCTTCAAG CTGAGCCTGCCCAGCCTGCTGGCGTGCGGGCAGTGCAAGGCCACGGCCGTCTCGCCGCCG GAGTCCCCCACGGGCGTCGGCGCGAGGTCGTTCTCCTCGTCGGCGTCGTCGTCGGCGGGG ACGTCCCGGGGGAGGGAGCGCGACCGCCTGGCGGAGCTCCGGGAGATCTTCGGCCACTTC GACCGCGACATGGACGGGCGGATCTCCGGCGACGAGCTCCGCGAGTTCTTCGCGTCCATG GGCGACGACTCCGGCGCCGCCGCCGCCGCCGCCGCGGCGATGGGGCTCGACGGCGCGGCG GGCGGCGGCGAGAGCGGCGGCGGCGGTGGCGGGCTGATGCTGGCGTTCGAGGACTTCGTG CGGATCGTGGAGCGGAAGGGCGGGGAGGAGGAGGAGCGGGAGGACCTGCGGCGCGCGTTC GGGGCGTTCGAGGCGGTGAAGGGGTCCGGGAGGATCACGCCGCGCGGGCTGCAGCGCGTG CTCAGCCAGCTCGGCGACGAGGCGTCCGTCGCCGAGTGCGAGGCCATGATAAGCGCCTAC GACGACGACGGCGACGGCGAGCTCGACTTCCACGACTTCCACCGCATGATGAGCCAAGAC TAA

Peptide Sequence

PEP ID	Os01t0765600-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:32258915:32260026:-1 gene:Os01g0765600 transcript:Os01t0765600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os01t0765600-01)
Sequence	MAGVEVSKPSRRLSPKGSFKLSLPSLLACGQCKATAVSPPESPTGVGARSFSSSASSSAG TSRGRERDRLAELREIFGHFDRDMDGRISGDELREFFASMGDDSGAAAAAAAAMGLDGAA GGGESGGGGGGLMLAFEDFVRIVERKGGEEEEREDLRRAFGAFEAVKGSGRITPRGLQRV LSQLGDEASVAECEAMISAYDDDGDGELDFHDFHRMMSQD

Transcript Sequence

Transcript ID	Os01t0765600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32258915:32260026:-1 gene:Os01g0765600 gene_biotype:protein_coding transcript_biotype:protein_coding description:EF-Hand type domain containing protein. (Os01t0765600-01)
Sequence	CTCACTAGCTAAGCTCGGGAATCCTAAGTAAGTGAAAGCTTAGCTAGCTTCGCATAAATC CAGCTCTCTCTTGCTAATGGCGGGCGTCGAGGTCTCCAAGCCGTCGAGGCGCCTGTCGCC GAAGGGGAGCTTCAAGCTGAGCCTGCCCAGCCTGCTGGCGTGCGGGCAGTGCAAGGCCAC GGCCGTCTCGCCGCCGGAGTCCCCCACGGGCGTCGGCGCGAGGTCGTTCTCCTCGTCGGC GTCGTCGTCGGCGGGGACGTCCCGGGGGAGGGAGCGCGACCGCCTGGCGGAGCTCCGGGA GATCTTCGGCCACTTCGACCGCGACATGGACGGGCGGATCTCCGGCGACGAGCTCCGCGA GTTCTTCGCGTCCATGGGCGACGACTCCGGCGCCGCCGCCGCCGCCGCCGCGGCGATGGG GCTCGACGGCGCGGCGGGCGGCGGCGAGAGCGGCGGCGGCGGTGGCGGGCTGATGCTGGC GTTCGAGGACTTCGTGCGGATCGTGGAGCGGAAGGGCGGGGAGGAGGAGGAGCGGGAGGA CCTGCGGCGCGCGTTCGGGGCGTTCGAGGCGGTGAAGGGGTCCGGGAGGATCACGCCGCG CGGGCTGCAGCGCGTGCTCAGCCAGCTCGGCGACGAGGCGTCCGTCGCCGAGTGCGAGGC CATGATAAGCGCCTACGACGACGACGGCGACGGCGAGCTCGACTTCCACGACTTCCACCG CATGATGAGCCAAGACTAAGCTATAGCTCCGCCGTGCGTGCGTGTTCCGCGCGCGCCGTC CGTCGCCGCGTCGTCACGAGGAAATTTGCCTCCGCGGGTTCGATCGTGTCTGTTCGTGTG TGTGCTGTTGTGTACGTGTTCGTGCGGGTTGTGGGAGGCCGGCTGTGACTATGTGAGATG GAGTGTGTGTTTTGGTCGCGTGATCGTATCGATGTGCGTGCGTGCGTGCGTGCGTGCACG CCGCGCGCGGCGCGGCGTCGTACGGTTGTCTGCTTCGATCGGTCGATCTATGTATATGGT GCACGAACGCGGGACGCCTTAGCAATTTAGCTGTGCTTTGTTTAACACGAAGCCAGCATG AGTACTAGTAAAAAAAATTCCCTTGTACCTCT