Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0763100-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:32094307:32098510:1 gene:Os01g0763100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 4, RHOMBOID 4 description:Hypothetical conserved gene. (Os01t0763100-00)
Sequence

ATGGCGACGGGGAGGAGGTTCCTGCAGTTCCAGTCGCTCCTCGCGCAGCAAGCCCTACGC
CTCCGCGCCGCCCCGAGACCTAAACCCCAACCAAACCCCCCCCACCGATTCCTCCACGCC
CCATCCAGTCCCGCGGCCGCCTCGCCCTCCCGCCTCCCCCTATGGCGCAGCACTGGCTCG
CTCCTGCCGGTGAGCGCGGCGGCGGCCGCGGCGGCGGCGGCAGCCGCCCGGGCCGCCGCG
GCGCGGTGGCTGATGGCCGCGCGCGAGGCGGGCTCGCTCGAGCTCTTCTCGCTGCAGCGG
CGCAGGTCCTCGGGGTGGTTCCCCTCCTCGTCCATGTTCCTTAGCGGCGTGTCCTGGACG
AAGTGGTTGCCGTCCGCCGATGGGGCAGTGTTGATGCTCGTGGGCGCCAATGTGGGCGTG
TTCATGCTATGGCACCTGGCTGATCCTAGCTTCATGAGGAGGCATTTTATGATTTCTCTT
GATAACTTCAAAAGCGGGAGGTTACACACGTTGCTCACGAATGCCTTCAGCCACGCAGAG
AGTGGTCACCTCATCAGCAATATGATCGGTCTCTACTTCTTCGGATCAAGTATTTCCAAC
ATGTTTGGTCCTGCTTTTCTACTGAAGTTGTACGTAGCAGGAGCACTTGCTGGATCTGCA
TTCTTCTTGCTAGAGAAAGCCTTCCTAGCTCCACGAAGACAGTTTTATGGCGGATGGGAC
AATTCAAGAACTCCTGCGCTTGGTGCAAGTGCTGCTGCTAATGCAATTATCCTTCTTGAC
ATCTTTTTGTATCCAAAGAAACTAGTCTATCTTTACTTCTTCATTCCTATTCCAGCTGCA
ATTATGGGGGCTATTTTGATCGGTGCTGATTTGCTGAGGGTGAAGAGGCAAGGTCAGGTA
TCAGGTACTTCTCATTTAGGTGGTGCCCTAATAGCTGCTCTTGCATGGGCTCGAATCAGG
AAGGGTTGGATCTGA

Peptide Sequence

PEP ID

Os01t0763100-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:32094307:32098510:1 gene:Os01g0763100 transcript:Os01t0763100-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 4, RHOMBOID 4 description:Hypothetical conserved gene. (Os01t0763100-00)
Sequence

MATGRRFLQFQSLLAQQALRLRAAPRPKPQPNPPHRFLHAPSSPAAASPSRLPLWRSTGS
LLPVSAAAAAAAAAAARAAAARWLMAAREAGSLELFSLQRRRSSGWFPSSSMFLSGVSWT
KWLPSADGAVLMLVGANVGVFMLWHLADPSFMRRHFMISLDNFKSGRLHTLLTNAFSHAE
SGHLISNMIGLYFFGSSISNMFGPAFLLKLYVAGALAGSAFFLLEKAFLAPRRQFYGGWD
NSRTPALGASAAANAIILLDIFLYPKKLVYLYFFIPIPAAIMGAILIGADLLRVKRQGQV
SGTSHLGGALIAALAWARIRKGWI

Transcript Sequence

Transcript ID

Os01t0763100-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:32094307:32098510:1 gene:Os01g0763100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Rhomboid 4, RHOMBOID 4 description:Hypothetical conserved gene. (Os01t0763100-00)
Sequence

CGGAGAGCGCAAAGCCACCGGCCGCGCCGCCGCGAAAGCCCGAGGCGGAGGAGACGGCGG
CGGAGCGAAGAGTAGGCGGCGGGGAGCTAGGCGGGAATGGCGACGGGGAGGAGGTTCCTG
CAGTTCCAGTCGCTCCTCGCGCAGCAAGCCCTACGCCTCCGCGCCGCCCCGAGACCTAAA
CCCCAACCAAACCCCCCCCACCGATTCCTCCACGCCCCATCCAGTCCCGCGGCCGCCTCG
CCCTCCCGCCTCCCCCTATGGCGCAGCACTGGCTCGCTCCTGCCGGTGAGCGCGGCGGCG
GCCGCGGCGGCGGCGGCAGCCGCCCGGGCCGCCGCGGCGCGGTGGCTGATGGCCGCGCGC
GAGGCGGGCTCGCTCGAGCTCTTCTCGCTGCAGCGGCGCAGGTCCTCGGGGTGGTTCCCC
TCCTCGTCCATGTTCCTTAGCGGCGTGTCCTGGACGAAGTGGTTGCCGTCCGCCGATGGG
GCAGTGTTGATGCTCGTGGGCGCCAATGTGGGCGTGTTCATGCTATGGCACCTGGCTGAT
CCTAGCTTCATGAGGAGGCATTTTATGATTTCTCTTGATAACTTCAAAAGCGGGAGGTTA
CACACGTTGCTCACGAATGCCTTCAGCCACGCAGAGAGTGGTCACCTCATCAGCAATATG
ATCGGTCTCTACTTCTTCGGATCAAGTATTTCCAACATGTTTGGTCCTGCTTTTCTACTG
AAGTTGTACGTAGCAGGAGCACTTGCTGGATCTGCATTCTTCTTGCTAGAGAAAGCCTTC
CTAGCTCCACGAAGACAGTTTTATGGCGGATGGGACAATTCAAGAACTCCTGCGCTTGGT
GCAAGTGCTGCTGCTAATGCAATTATCCTTCTTGACATCTTTTTGTATCCAAAGAAACTA
GTCTATCTTTACTTCTTCATTCCTATTCCAGCTGCAATTATGGGGGCTATTTTGATCGGT
GCTGATTTGCTGAGGGTGAAGAGGCAAGGTCAGGTATCAGGTACTTCTCATTTAGGTGGT
GCCCTAATAGCTGCTCTTGCATGGGCTCGAATCAGGAAGGGTTGGATCTGATCATG