Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0762400-00
CDS Infomation

cds chromosome:IRGSP-1.0:1:32072708:32082549:-1 gene:Os01g0762400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Import inner membrane translocase subunit TIM50. (Os01t0762400-00)
Sequence

ATGGACGGCGTCGCGAGGTCGCGCCTCCTCGTCCCGCTCCTCCCCAGGATCTCCGCCCGC
TCCTTCTCCGCCGCCTCCCCCGCGTCAGAGCCAGCGGCGGCTGCGGCGGCCGTCGCCGCC
TCCGACGCGGCCGCCGCCACGGACTACTCGTCCTCCGCGGGCGATCCCTCGTCCGCGCCG
CCCCCGCCGGCCCGCAAGCCGCTGGGCCTGCTCAAGGGCGGCGTCCTCGCGGTTGTCGCC
GCCGCGTTCGGCGCCACAGGCTACGTCAGCTATGCTTATTCTCTGGATGAAATTGATCAG
AGGACGCGGGAGTTCCGGAAGAACTCGAAGCAGCCCATCCGTGATGACCTGTCCGGTTTC
GAGAAGTTTCAGGCTATGGCTTATTCAGCAGCTATGAAAGTTCCTGTTGCTGCTATTGAG
TTCTATTTGGATACCAGGAGCCAAATAGAAGATCAAATTCGGGGCTTTAGTGAACCATCA
TCAGATAAACTTCTTCCGGATCTACTTCCTCAAGAGCAGCATGTCTTCACCCTAGTTCTG
GATCTGAATGAGACTCTTGTATACTCAGATTGGAAGCGTGAGCGAGGATGGAGAACTTTT
AAGAGGCCAGGAGTGGATGCCTTTTTGGAACATCTTGGAAAATTCTATGAAATTGTTGTG
TACTCTGATCAGCTGAGTATGTATGTTGATCCTGTTATTGAAAGACTGGATCCAAAGGGC
TGTGTTCAGCACAGGTTATCAAGAGTTGCAACTAAATATGAAAATGGAAAACACTATCGG
GATTTATCAAAGCTAAACAGAAATCCCGCACAAGTCATTTATATCAGTGGGCATGCTCTG
GAATCATGCCTGCAGCCTGAAAATTGTGTTGAGATCAAACCTTGGAAGCTTGAAAATGAT
GACACTCAACTGCTTGATCTTATTCCCTTTCTTGAATATGTTGCTATGGCAAGACCTTCG
GATATCAGGGCTGTTCTTGCGTCCTATCAAGGCCGTGATATACCTGCTGAGTTTATTGAG
CGTTCAAAGGAGCACCAGAGGCGCATGCAGGAGCAAAAGCATCAGGGCCGCTTATGGCGG
AGATGA

Peptide Sequence

PEP ID

Os01t0762400-00
PEP Infomation

pep chromosome:IRGSP-1.0:1:32072708:32082549:-1 gene:Os01g0762400 transcript:Os01t0762400-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Import inner membrane translocase subunit TIM50. (Os01t0762400-00)
Sequence

MDGVARSRLLVPLLPRISARSFSAASPASEPAAAAAAVAASDAAAATDYSSSAGDPSSAP
PPPARKPLGLLKGGVLAVVAAAFGATGYVSYAYSLDEIDQRTREFRKNSKQPIRDDLSGF
EKFQAMAYSAAMKVPVAAIEFYLDTRSQIEDQIRGFSEPSSDKLLPDLLPQEQHVFTLVL
DLNETLVYSDWKRERGWRTFKRPGVDAFLEHLGKFYEIVVYSDQLSMYVDPVIERLDPKG
CVQHRLSRVATKYENGKHYRDLSKLNRNPAQVIYISGHALESCLQPENCVEIKPWKLEND
DTQLLDLIPFLEYVAMARPSDIRAVLASYQGRDIPAEFIERSKEHQRRMQEQKHQGRLWR
R

Transcript Sequence

Transcript ID

Os01t0762400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:32072708:32082549:-1 gene:Os01g0762400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Import inner membrane translocase subunit TIM50. (Os01t0762400-00)
Sequence

CCCTCCAGGCCTCCACGGCTCCACCTCCTTCCGCTTTCGCCTATCCGCCGTCTCCCCCCT
CCCCCTTCCTCGGCTCCTCGCCATCTCGCGCTCGGCCGCCTCTCTCCCTGCTTAAACCCT
CTATTCGTCTTCTCCAAGCAAAACCAAAACCCGAGCCCACCCACCGAGGTCCTCTCCCCC
TCCTCTCGCTGGGCCACCACGCCATGGACGGCGTCGCGAGGTCGCGCCTCCTCGTCCCGC
TCCTCCCCAGGATCTCCGCCCGCTCCTTCTCCGCCGCCTCCCCCGCGTCAGAGCCAGCGG
CGGCTGCGGCGGCCGTCGCCGCCTCCGACGCGGCCGCCGCCACGGACTACTCGTCCTCCG
CGGGCGATCCCTCGTCCGCGCCGCCCCCGCCGGCCCGCAAGCCGCTGGGCCTGCTCAAGG
GCGGCGTCCTCGCGGTTGTCGCCGCCGCGTTCGGCGCCACAGGCTACGTCAGCTATGCTT
ATTCTCTGGATGAAATTGATCAGAGGACGCGGGAGTTCCGGAAGAACTCGAAGCAGCCCA
TCCGTGATGACCTGTCCGGTTTCGAGAAGTTTCAGGCTATGGCTTATTCAGCAGCTATGA
AAGTTCCTGTTGCTGCTATTGAGTTCTATTTGGATACCAGGAGCCAAATAGAAGATCAAA
TTCGGGGCTTTAGTGAACCATCATCAGATAAACTTCTTCCGGATCTACTTCCTCAAGAGC
AGCATGTCTTCACCCTAGTTCTGGATCTGAATGAGACTCTTGTATACTCAGATTGGAAGC
GTGAGCGAGGATGGAGAACTTTTAAGAGGCCAGGAGTGGATGCCTTTTTGGAACATCTTG
GAAAATTCTATGAAATTGTTGTGTACTCTGATCAGCTGAGTATGTATGTTGATCCTGTTA
TTGAAAGACTGGATCCAAAGGGCTGTGTTCAGCACAGGTTATCAAGAGTTGCAACTAAAT
ATGAAAATGGAAAACACTATCGGGATTTATCAAAGCTAAACAGAAATCCCGCACAAGTCA
TTTATATCAGTGGGCATGCTCTGGAATCATGCCTGCAGCCTGAAAATTGTGTTGAGATCA
AACCTTGGAAGCTTGAAAATGATGACACTCAACTGCTTGATCTTATTCCCTTTCTTGAAT
ATGTTGCTATGGCAAGACCTTCGGATATCAGGGCTGTTCTTGCGTCCTATCAAGGCCGTG
ATATACCTGCTGAGTTTATTGAGCGTTCAAAGGAGCACCAGAGGCGCATGCAGGAGCAAA
AGCATCAGGGCCGCTTATGGCGGAGATGATTATAGATCTTTTGGAAGGAAA