Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os01t0762000-01
CDS Infomation	cds chromosome:IRGSP-1.0:1:32058676:32062829:-1 gene:Os01g0762000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV alpha description:ARF/SAR superfamily domain containing protein. (Os01t0762000-01);Hypothetical conserved gene. (Os01t0762000-02)
Sequence	ATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATCGGCCCGTCCACGGCG CTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTGGGGCGGCTGCGCCAC CGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGCTGGCTGCACCCGCGG GACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTCCTGCTGCGGGTGCGG GGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCCGCGTACCGGCGCAAG TTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGGGCGCACGCCGCGCGG ATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTCTACGACGAGGAGCTC GTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGCTCGCTCAGGGACATC GTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATGTGCAACTCCGAGCTC CACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATTGAGGAAGTATCTACT CAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTCGAAGAGAAACTTGCA TTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTGCTAAGCGGGGGTGCT TCTCTAGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAACATAAGCTTCTGCCA AGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATAGTAGCAACAAGGTCA TGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAGTTCTTTGACCAGATG GGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCTGTTCATGACATTAGA CATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTCCAAGAGGCCTATGAC ATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAGCATGAGCCACCTCGA TGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCAGTAACTGCTTCCTGT GCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGACAGATTTGGAGAAACA GTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTTGGTGCTACAACTCGG CGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAATTGAAGGAATTATTC AATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCTCCACTGTTGAGACTC AAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTGGCTGAACTTGCTGAG ATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTTCCTTTAGGAGGAATA GCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTTATGCCAGCCACGCTT GCTCAGTATTCCAAGATCATACAGAATCCATCTTACGCTGAGCTTCAGAAGGCTGCAAAT CAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCAAATTGTGCTATTGAG CTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGGCTAAAGAGAAGCGCG GAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTCTGCCCATCTAGAAGG ATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCCCTTGAAGAAGAATTC CTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCTGGACCATCTAACAAA AACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAATCTGAGAGTATAGAC TTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCCTCAGCCAACAAATTC GTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACAATTTCATCGAGGGAA GACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCTCAGGCAATTGGTAGA GAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGCTTGGGCAATTCAGGT TATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGTTCAACAAGTATCATG GTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGTATTCTGTTTAATGTT GTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTTCAGGGAACATCGCAG GAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCTTCGGATGACGACGAT GTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCAAACATGAGCAGCCAA AATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCTGTCCTCTTCAGTAGATTGT GAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTTGATATTGGTATGGAG ATTCGTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGGTCTTCTGCAAAAATA GGACTGAGGACAGTGCATGCAGAATTTATCAGCAATCCAGGTGCTGGGAAGGGAGAAGTT GACTCAGGGGCTGCTAATAAAGAATTTTCCTATTTTTCTCAAACAGCAGATACTGTTATA TTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTAGAAGCTTTAACCTCA TACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAATTTGAGTGAAATAATG GCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGAGATGAAGTTG

Peptide Sequence

PEP ID	Os01t0762000-01
PEP Infomation	pep chromosome:IRGSP-1.0:1:32058676:32062829:-1 gene:Os01g0762000 transcript:Os01t0762000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV alpha description:ARF/SAR superfamily domain containing protein. (Os01t0762000-01);Hypothetical conserved gene. (Os01t0762000-02)
Sequence	MDAISSEAPVGVFAIGPSTALGRALALRVLLCGSLGRLRHRLAAALRAALPVAAGWLHPR DNTRGILLAVCAVALLLRVRGRGGGRAGVRARVQSAYRRKFWRNMMRAALTYEEWAHAAR MLDRETPRRATDADLYDEELVRNKLRELRHRRQEGSLRDIVFCMRADLLRNLGNMCNSEL HKGRLQVPKLIKEYIEEVSTQLKMVCNSDSDDLPLEEKLAFMHETRHAFGRTALLLSGGA SLGCFHVGVVKTLVEHKLLPRIISGSSVGSIMCSIVATRSWPELESFFEEWHSLKFFDQM GGIFPVVKRILTHGAVHDIRHLQTLLRNLTSNLTFQEAYDMTGRILVVTVCSPRKHEPPR CLNYLTSPHVLIWSAVTASCAFPGLFEAQELMAKDRFGETVPFHAPFLLGLEERVGATTR RWRDGSLESDLPMKQLKELFNVNHFIVSQANPHIAPLLRLKEIIRAYGGSFAAKLAELAE MEVKHRCNQILELGFPLGGIAKLFAQDWEGDVTVVMPATLAQYSKIIQNPSYAELQKAAN QGRRCTWEKLSAIRANCAIELVLDECVALLNHMRRLKRSAERAAASQGHGPTIRLCPSRR IPSWNLIARENSSGSLEEEFLISPRTNHHADGGIAGPSNKNHHVQQNVHDGSDSESESID LNSWTRSGGPLMRTASANKFVSFVQNLEIDTEFRTISSREDRTDVVTPNANFLVSQAIGR ESVDNSAMPITPDRSLGNSGYDPHDSNVPRSPFGCSTSIMVSEGDLLQPEKIENGILFNV VKRDTLLTPTGGVELQGTSQEPDVETIQTECLDDASDDDDVGLNAGDEAAIDPRANMSSQ NTQHQGSSLENINLSSSVDCEAETITSKSKGSSLFDIGMEIRPTILSTESSMYERSSAKI GLRTVHAEFISNPGAGKGEVDSGAANKEFSYFSQTADTVIFSESCETGQHHEVNVEALTS YPVSVLEDDRSGGFNLSEIMATTFIAEADAPISRRDEV

Transcript Sequence

Transcript ID	Os01t0762000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:1:32058676:32062829:-1 gene:Os01g0762000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A IV alpha description:ARF/SAR superfamily domain containing protein. (Os01t0762000-01);Hypothetical conserved gene. (Os01t0762000-02)
Sequence	GCGAGACGAGACGAAACCAACTCGTCCCCCTCTTGATCCCCCGTCTCGCTTCGCTCGGCG GCCGCGCCACCTCCAAATCTCCAAGCTCCCCGACTCGGCGACTCCCACACGCCATGCCCA TCGCGCCCGCGGCTTGCAGCCATCAAACCCCCCCGCGCTCTTTCGCCTCCTGAGCCCGTC CGCTCGCCCGTGGCCATGGACGCGATCAGCAGCGAGGCGCCGGTGGGGGTGTTCGCGATC GGCCCGTCCACGGCGCTGGGCCGCGCGTTGGCGCTGCGGGTGCTGCTCTGCGGCTCCCTG GGGCGGCTGCGCCACCGCCTCGCCGCGGCGCTGCGGGCCGCGCTCCCCGTGGCGGCGGGC TGGCTGCACCCGCGGGACAACACCCGCGGGATCCTGCTCGCCGTCTGCGCCGTCGCGCTC CTGCTGCGGGTGCGGGGGCGGGGCGGCGGGCGCGCCGGGGTCCGGGCGCGGGTGCAGTCC GCGTACCGGCGCAAGTTCTGGCGGAACATGATGCGCGCCGCGCTCACCTACGAGGAGTGG GCGCACGCCGCGCGGATGCTGGACCGCGAGACCCCGCGCCGCGCCACCGACGCCGACCTC TACGACGAGGAGCTCGTGCGCAACAAGCTCCGCGAGCTCAGGCACCGCCGCCAGGAGGGC TCGCTCAGGGACATCGTCTTCTGCATGCGCGCCGACCTGCTCAGGAATCTCGGCAACATG TGCAACTCCGAGCTCCACAAGGGGAGGCTGCAGGTGCCGAAACTCATAAAGGAGTACATT GAGGAAGTATCTACTCAGCTGAAAATGGTATGTAATTCTGATTCAGACGACTTGCCTCTC GAAGAGAAACTTGCATTTATGCATGAGACAAGACATGCCTTCGGTAGAACAGCCTTGCTG CTAAGCGGGGGTGCTTCTCTAGGTTGTTTCCATGTGGGTGTTGTGAAAACATTGGTAGAA CATAAGCTTCTGCCAAGGATAATTTCAGGATCTAGCGTTGGTTCTATAATGTGCTCCATA GTAGCAACAAGGTCATGGCCAGAGCTGGAGAGCTTTTTCGAGGAGTGGCATTCCTTGAAG TTCTTTGACCAGATGGGCGGGATCTTTCCCGTAGTTAAAAGGATTTTGACTCATGGAGCT GTTCATGACATTAGACATTTGCAGACGCTTTTGAGAAATCTTACCAGCAATTTGACATTC CAAGAGGCCTATGACATGACGGGCCGGATTCTTGTTGTCACTGTGTGTTCTCCAAGGAAG CATGAGCCACCTCGATGCCTGAACTATTTGACATCACCTCATGTTCTCATCTGGAGTGCA GTAACTGCTTCCTGTGCTTTTCCTGGTCTTTTTGAGGCCCAAGAGTTGATGGCAAAAGAC AGATTTGGAGAAACAGTTCCTTTTCATGCTCCTTTCCTGTTGGGCTTGGAAGAAAGAGTT GGTGCTACAACTCGGCGTTGGAGAGATGGGAGCTTGGAAAGTGATTTGCCAATGAAGCAA TTGAAGGAATTATTCAATGTGAATCATTTCATAGTAAGCCAAGCCAATCCTCACATAGCT CCACTGTTGAGACTCAAGGAAATTATCAGGGCTTATGGAGGCAGTTTTGCTGCCAAGTTG GCTGAACTTGCTGAGATGGAAGTTAAGCATAGGTGCAACCAAATTCTCGAACTTGGATTT CCTTTAGGAGGAATAGCCAAGTTGTTTGCTCAAGATTGGGAAGGTGATGTCACAGTTGTT ATGCCAGCCACGCTTGCTCAGTATTCCAAGATCATACAGAATCCATCTTACGCTGAGCTT CAGAAGGCTGCAAATCAGGGTAGGCGATGCACCTGGGAGAAGTTATCAGCCATTAGGGCA AATTGTGCTATTGAGCTGGTACTAGATGAATGTGTTGCCCTGTTGAACCATATGCGTAGG CTAAAGAGAAGCGCGGAAAGAGCAGCAGCTTCACAAGGACATGGTCCTACAATCAGACTC TGCCCATCTAGAAGGATTCCATCATGGAATCTCATAGCAAGAGAAAATTCATCTGGTTCC CTTGAAGAAGAATTCCTTATATCTCCTCGTACAAACCATCATGCAGATGGAGGAATTGCT GGACCATCTAACAAAAACCATCATGTCCAACAAAATGTACATGATGGCAGTGACAGTGAA TCTGAGAGTATAGACTTAAACTCATGGACAAGAAGTGGTGGCCCTCTTATGAGGACAGCC TCAGCCAACAAATTCGTCAGTTTTGTTCAGAATCTTGAGATTGACACAGAGTTCAGAACA ATTTCATCGAGGGAAGACAGAACTGATGTTGTAACACCAAATGCTAATTTCTTGGTTTCT CAGGCAATTGGTAGAGAATCTGTTGACAACAGTGCAATGCCTATTACTCCTGATAGGAGC TTGGGCAATTCAGGTTATGATCCTCATGATAGTAATGTCCCTAGATCTCCATTTGGTTGT TCAACAAGTATCATGGTTTCTGAAGGCGACTTACTGCAACCCGAAAAGATTGAAAATGGT ATTCTGTTTAATGTTGTGAAAAGGGATACTCTTCTAACACCTACAGGTGGAGTTGAGCTT CAGGGAACATCGCAGGAACCAGACGTGGAAACAATTCAGACAGAGTGCCTTGATGATGCT TCGGATGACGACGATGTGGGATTAAATGCTGGTGATGAAGCAGCAATTGACCCTAGAGCA AACATGAGCAGCCAAAATACACAACACCAGGGGTCTTCACTAGAAAATATAAATCTGTCC TCTTCAGTAGATTGTGAAGCTGAAACAATTACTAGTAAATCAAAGGGTTCATCTCTTTTT GATATTGGTATGGAGATTCGTCCAACAATCTTGAGCACGGAAAGTAGTATGTACGAGAGG TCTTCTGCAAAAATAGGACTGAGGACAGTGCATGCAGAATTTATCAGCAATCCAGGTGCT GGGAAGGGAGAAGTTGACTCAGGGGCTGCTAATAAAGAATTTTCCTATTTTTCTCAAACA GCAGATACTGTTATATTTTCAGAAAGCTGTGAAACTGGGCAACATCATGAAGTGAATGTA GAAGCTTTAACCTCATACCCTGTTTCAGTTCTGGAAGATGATAGGTCTGGTGGCTTCAAT TTGAGTGAAATAATGGCTACAACTTTCATTGCCGAAGCTGATGCTCCAATATCTAGAAGA GATGAAGTTG