Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os01t0758400-02
CDS Infomation

cds chromosome:IRGSP-1.0:1:31870933:31877539:-1 gene:Os01g0758400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-01);Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-02)
Sequence

GATCAAATAGCAGCGATGGAAAGGGACACAAGCTCTAGTGATGTTTCTGCTTCTCATGTA
GGACGTGCCAGGCAGCGAAGACGTCCTACTGAGGCTACTGCAGATGGGAATAGAACCAAT
GGACCAGCTTTGCTTGTCAATGATCAGAATAAGTACAAGTCAATGCTTATCCGTACATAT
TCTACAGTATGGATGATTGGAGGCTTTGTGTTGATAGTTTATATGGGTCACCTCTATATC
TGGGCCATGGTGGTTGTTATTCAAATATTCATGGCCAAAGAGCTTTTTAACCTACTCAGA
AAATCCAGTGAAGAAAAACAACTACCAGGTTTCAGGCTACTGAATTGGCACTTCTTTTTC
ACAGCAATGTTGTTTACTTATGGGCGTTTTCTTAGTCGACAGCTTGTTAACACAGTAACT
TCAGATCACTTATTGTATAAGGTTGTCAGTGGTCTCATAAAGTATCAGATGTTCATTTGC
TATTTTCTTTACATTGCTGGATTTGTCTGGTTTATTTTGACTCTGAAGAAAAAGACATAC
AAGTATCAGTTCAAACAATATGCCTGGACGCACATGATCCTTTTAACGGTTTTTGCACAA
TCTTCTTTTACCGTGGCAAATATATTTGAAGGGATGTTCTGGTTTCTGTTGCCTGCTTCT
CTCATTGTGATTAACGACATTGCTGCCTATCTATTTGGGTTCTTTCTTGGGAGAACACCT
CTGATCAAGTTATCTCCAAAGAAAACTTGGGAAGGTTTTATTGGTGCATCTGTGACAACT
ATCATATCTGCTTTTGTGTTAGCAAATGTAATGGGCCGTTTCCAATGGTTGACATGCCCA
AGAAAAGACCTGTCGACAGGGTGGCTTCGTTGTGACCCTGGTCCTATGTTTAAGCCAGAA
CATTATTCTTTGGGAGAATGGGTGCCAAAGGGGTTCCCTTGGAAGGAAGTTGTTCTTTTG
CCTGTGCAGTGGCATGCTTTAGCACTAGGTTTGTTTGCATCAATAATAGCACCTTTTGGA
GGTTTCTTTGCAAGTGGCTTCAAGAGGGCCTTTAAAATAAAGGATTTTGGAGACAGCATA
CCTGGGCATGGTGGGATTACTGACCGAATGGATTGTCAGATGGTTATGGCAGTTTTTGCA
TACATATATCACCAATCATTCATATCGCCCCAAAACTACTCTGTTGAGCTAATCTTGGAA
CAGATTCTAAGAAATCTAACCTTTGAGGAGCAGAAATTCTTATATCAGCAGCTTGGGGAA
ATCTACCGTGAAAGGCAATTAATGCAGAGCTGA

Peptide Sequence

PEP ID

Os01t0758400-02
PEP Infomation

pep chromosome:IRGSP-1.0:1:31870933:31877539:-1 gene:Os01g0758400 transcript:Os01t0758400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-01);Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-02)
Sequence

DQIAAMERDTSSSDVSASHVGRARQRRRPTEATADGNRTNGPALLVNDQNKYKSMLIRTY
STVWMIGGFVLIVYMGHLYIWAMVVVIQIFMAKELFNLLRKSSEEKQLPGFRLLNWHFFF
TAMLFTYGRFLSRQLVNTVTSDHLLYKVVSGLIKYQMFICYFLYIAGFVWFILTLKKKTY
KYQFKQYAWTHMILLTVFAQSSFTVANIFEGMFWFLLPASLIVINDIAAYLFGFFLGRTP
LIKLSPKKTWEGFIGASVTTIISAFVLANVMGRFQWLTCPRKDLSTGWLRCDPGPMFKPE
HYSLGEWVPKGFPWKEVVLLPVQWHALALGLFASIIAPFGGFFASGFKRAFKIKDFGDSI
PGHGGITDRMDCQMVMAVFAYIYHQSFISPQNYSVELILEQILRNLTFEEQKFLYQQLGE
IYRERQLMQS

Transcript Sequence

Transcript ID

Os01t0758400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:1:31870933:31877539:-1 gene:Os01g0758400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-01);Similar to Phosphatidate cytidylyltransferase. (Os01t0758400-02)
Sequence

CCTCTCCCTCTCTAGTCTCTCTCTCCTCCCCCTTCTCGAAGCACGCTGCCGCCGCCTCCT
CTCCCCGCGCCGCGCGCCTCGCCGAGTTAGGGTTCCGGCGAGCTCGGGGCCTTTCTCCGG
CGACGGCGCCCTCCTCCGGCCCGAGGGCTCGCTTCGCGGTGAGATCAAATAGCAGCGATG
GAAAGGGACACAAGCTCTAGTGATGTTTCTGCTTCTCATGTAGGACGTGCCAGGCAGCGA
AGACGTCCTACTGAGGCTACTGCAGATGGGAATAGAACCAATGGACCAGCTTTGCTTGTC
AATGATCAGAATAAGTACAAGTCAATGCTTATCCGTACATATTCTACAGTATGGATGATT
GGAGGCTTTGTGTTGATAGTTTATATGGGTCACCTCTATATCTGGGCCATGGTGGTTGTT
ATTCAAATATTCATGGCCAAAGAGCTTTTTAACCTACTCAGAAAATCCAGTGAAGAAAAA
CAACTACCAGGTTTCAGGCTACTGAATTGGCACTTCTTTTTCACAGCAATGTTGTTTACT
TATGGGCGTTTTCTTAGTCGACAGCTTGTTAACACAGTAACTTCAGATCACTTATTGTAT
AAGGTTGTCAGTGGTCTCATAAAGTATCAGATGTTCATTTGCTATTTTCTTTACATTGCT
GGATTTGTCTGGTTTATTTTGACTCTGAAGAAAAAGACATACAAGTATCAGTTCAAACAA
TATGCCTGGACGCACATGATCCTTTTAACGGTTTTTGCACAATCTTCTTTTACCGTGGCA
AATATATTTGAAGGGATGTTCTGGTTTCTGTTGCCTGCTTCTCTCATTGTGATTAACGAC
ATTGCTGCCTATCTATTTGGGTTCTTTCTTGGGAGAACACCTCTGATCAAGTTATCTCCA
AAGAAAACTTGGGAAGGTTTTATTGGTGCATCTGTGACAACTATCATATCTGCTTTTGTG
TTAGCAAATGTAATGGGCCGTTTCCAATGGTTGACATGCCCAAGAAAAGACCTGTCGACA
GGGTGGCTTCGTTGTGACCCTGGTCCTATGTTTAAGCCAGAACATTATTCTTTGGGAGAA
TGGGTGCCAAAGGGGTTCCCTTGGAAGGAAGTTGTTCTTTTGCCTGTGCAGTGGCATGCT
TTAGCACTAGGTTTGTTTGCATCAATAATAGCACCTTTTGGAGGTTTCTTTGCAAGTGGC
TTCAAGAGGGCCTTTAAAATAAAGGATTTTGGAGACAGCATACCTGGGCATGGTGGGATT
ACTGACCGAATGGATTGTCAGATGGTTATGGCAGTTTTTGCATACATATATCACCAATCA
TTCATATCGCCCCAAAACTACTCTGTTGAGCTAATCTTGGAACAGATTCTAAGAAATCTA
ACCTTTGAGGAGCAGAAATTCTTATATCAGCAGCTTGGGGAAATCTACCGTGAAAGGCAA
TTAATGCAGAGCTGAGAACTAGTTTGCTTATGATGAAGCATACAGTATGTTGTTTTTGAG
CGCTCGGTTCCATGTATAGCAGCATAGCTTCTCTGTACGGCGATAGAGCAACGTCCCTTT
CCAAACCATTGTACAGAATAGAGTGTGGATGGGGTTTAGCGATTTAGGTACTTGATTCGC
TCTCCACTTACGTTGCCTTCTCTGGCGATCGGTTTATCCTTTTACGCTAATTCTCATCAT
TTCTGCCCTTGTAACAAGGGAACCGGAAAAGGTTGTATTCGTGTATATCACTTCGTGTGT
TGGCCTCACATCAAATATGTGCAAGATGCACAAGATAACACAGGAAATGAGGAAAATTTA
TTCCCCTTTTAAAAGATATTTTCGTGGT